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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:3445021..3445636+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001330-T1 ID=KJC3_001330-T1|Name=KJC3_001330-T1|organism=Aspergillus niger KJC3|type=mRNA|length=616bp|location=Sequence derived from alignment at ch1:3445021..3445636+ (Aspergillus niger KJC3)
ATGGATAGCGCATCTCCCAGGCGTCGGGCTTCAGTTGCTCGTCATCTTTC
CCTAGAACCCTCACCCTCCGCTCCTCGTCGGCTATCCCATGGAAGCATAG
ACGCACTAGAAACCTCTGGCCACCAAAGGAAGCGCCGTCGGACCAGTCAT
CCTGAGCGACAGGAGGATGCGCCCCCGGATGCAGTCGATCTTACAACCAC
CGAGGACATGGACCCTGTGTCGAGGACGCAAGCCAAACAACGAGCAGACG
TTATCCTCGCACAGCAGTCCCTAGATCATAACAAAGGGGAGTCTGTTCTA
CTTGCATACAAGTGTCCCGTCTGCATGGACACCCCGGTTGATGCTACTAG
TACTGCATGTGGTAAGTTTAATGCTGCGATATCGCATGCTACCTAGCTGA
CTCGATCAAGGGCATCTTTTCTGCCACAAGTGTATTATCGATACCTTGAA
GTTCAGCGAAGAACAGCGGTCGGATATGTCTGGAAAAGGCCCCCGGGGCA
CTTGCCCTGTGTGCAGAAAGTATCTCTCGCGCAACGACTTGCCCGGTCCA
AAGAGGAACCTCGTACCTCTACAGATCAAACTTACTACTCGAAAGAGGAG
AGAGACCGCGCAATGA back to topCoding sequence (CDS) from alignment at ch1:3445021..3445636+ >KJC3_001330-T1 ID=KJC3_001330-T1|Name=KJC3_001330-T1|organism=Aspergillus niger KJC3|type=CDS|length=1134bp|location=Sequence derived from alignment at ch1:3445021..3445636+ (Aspergillus niger KJC3)
ATGGATAGCGCATCTCCCAGGCGTCGGGCTTCAGTTGCTCGTCATCTTTC
CCTAGAACCCTCACCCTCCGCTCCTCGTCGGCTATCCCATGGAAGCATAG
ACGCACTAGAAACCTCTGGCCACCAAAGGAAGCGCCGTCGGACCAGTCAT
CCTGAGCGACAGGAGGATGCGCCCCCGGATGCAGTCGATCTTACAACCAC
CGAGGACATGGACCCTGTGTCGAGGACGCAAGCCAAACAACGAGCAGACG
TTATCCTCGCACAGCAGTCCCTAGATCATAACAAAGGGGAGTCTGTTCTA
CTTGCATACAAGTGTCCCGTCTGCATGGACACCCCGGTTGATGCTACTAG
TACTGCATGTGGGCATCTTTTCTGCCACAAGTGTATTATCGATACCTTGA
AGTTCAGCGAAGAACAGCGGTCGGATATGTCTGGAAAAGGCCCCCGGGGC
ACTTGCCCTGTGTGCAGAAAGTATCTCTCGCGCAACGACTTGCCCGGTCC
AAAGAGGAACCTCGTACCTCTACAGATCAAACTTACTACTCGAAAGAGGA
GAGAGACCGCGCAATGAATGGATAGCGCATCTCCCAGGCGTCGGGCTTCA
GTTGCTCGTCATCTTTCCCTAGAACCCTCACCCTCCGCTCCTCGTCGGCT
ATCCCATGGAAGCATAGACGCACTAGAAACCTCTGGCCACCAAAGGAAGC
GCCGTCGGACCAGTCATCCTGAGCGACAGGAGGATGCGCCCCCGGATGCA
GTCGATCTTACAACCACCGAGGACATGGACCCTGTGTCGAGGACGCAAGC
CAAACAACGAGCAGACGTTATCCTCGCACAGCAGTCCCTAGATCATAACA
AAGGGGAGTCTGTTCTACTTGCATACAAGTGTCCCGTCTGCATGGACACC
CCGGTTGATGCTACTAGTACTGCATGTGGGCATCTTTTCTGCCACAAGTG
TATTATCGATACCTTGAAGTTCAGCGAAGAACAGCGGTCGGATATGTCTG
GAAAAGGCCCCCGGGGCACTTGCCCTGTGTGCAGAAAGTATCTCTCGCGC
AACGACTTGCCCGGTCCAAAGAGGAACCTCGTACCTCTACAGATCAAACT
TACTACTCGAAAGAGGAGAGAGACCGCGCAATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0046872 | metal ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR017907 |
| DBxref | InterPro:IPR013083 |
| DBxref | InterPro:IPR018957 |
| DBxref | InterPro:IPR001841 |
| DBxref | PFAM:PF13445 |
| DBxref | PFAM:PF14634 |
| DBxref | PFAM:PF13639 |
| DBxref | PFAM:PF13920 |
| DBxref | PFAM:PF13923 |
| DBxref | PFAM:PF00097 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:3445021..3445636 + |
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