You are here

Home

KJC3_001338-T1, KJC3_001338-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001338-T1
Unique NameKJC3_001338-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:3468015..3470675+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001338-T1 ID=KJC3_001338-T1|Name=KJC3_001338-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2661bp|location=Sequence derived from alignment at ch1:3468015..3470675+ (Aspergillus niger KJC3)
GAAGAATATATCTGGTACTAAAAAATAAAAAAGCTTGTTGCGTTCATTCA
AAGGCAGCTGCTCGCCCACTTCAATTCTTCCTTCTATTTCTTCTGGTTCT
GTCTCATCCAATTTACCTCATCTTCCTTTCACCATCCCATAGCATCTGAA
CCCAAGTGGTGACTTCAACTATACCACCGCACTCTCCCATTGTATCCCCC
ATACCGGTGCTTGGATACTCCATTCCATTATCTTGACAGCAACATCTAGA
CGAGCGTCAACAATACCACACTGCAACTGGATTATGTACTTGGTCGTCTA
CCACACATCGCAACTCTACCAATATCGAAGCACTTCCTAAACAATCACTT
CCTAAGTTATTGTTCAGCAGCTTCTACATATACAAGCTTTAGTCTTCGAA
CCATCCCTATCCCATCCACAGCAACCACCCCGCCGGAACATTTTCTCCGC
AGCTCAAGTAGGGGCCTATAAAACCGGCTTTCAGAAATTCTCATATTCTT
TTCTGCCCGGCACGGTTGTCACAAAATCTAAGTGTTATCCACTAGAAATT
TTGACACCATGCCTGGCCGTCTACTCTCCAGCTTCGTTCGCCCCTCCCTC
TCTCACCACCACTCTCACCATTCTCCCGTCTCCCACTCCAACTCCTCGTC
CTCGTCGTCTGTGAATGAGATCCCACCGAATACTGTGGTCTCCAAGAAGC
CATCCGCTCATGGTGCGGAAAGAGCCCGTTCACCCGAGCGTCGTCTGTCT
TTCGCCGTCGAACACCTCATCCACCCCCACCGTGATCACAGCAAGGACAA
GCGACGCAGCCATGGCCGGTCCTCCCGTTCGAAGGAGCGCGCCGGACAAG
AGGAAATTGCCCATGCTCACGCTAAACTAGACGTCATCGTCGAATCCCCG
CCACTTGTGTGCTACGGATCCCCTGCGAACTCCACTGGTGCTCTCTTTTC
GGGGCGTCTGAAGATCAGCATCTCCGAGCTGGCCGGCATGGTTACCCTGG
ACACTTTCGATATGCGCCTCATGAGCAGACTGACGACGAAGAAGCCTGTT
TCCAGAGACTGCGCTAACTGCGCATCGCGCACTGAGGAGCTGACCCACTG
GAACTTCCTGACGGAGCCAATCCACCTCAAGAATGGCGACCATGAATTCC
CCTTCAGCTACCTGTTCCCCGGTCATCTACCCGCCTCCTGCAACGGTTCG
CTTGGTCAGGTCGAGTATTTCCTTTCTGCGCGTGCCCACAACATCAACGG
TGAGGAATACACCTACGAGATGCCCGTGCATATCAAGCGTGCCATCCTTC
CCGGAAACGACAAGTCCTCCATCCGCATCTTCCCTCCCACCAACCTCACC
GGCCGCATCGTTCTTCCCTCTGTGGTGCACCCGATTGGGACCTTCCCTGT
TCAGATGACTCTGAGCGGAATTGTGGATAAAAAGGAAGACACACAGACTC
GTTGGCGCCTGCGCAAGATGATGTGGCGGATCGAAGAACACCAAAAGATC
GTGTCCACCGCTTGCACCAAGCATGCACACAAGATTGGGGGCGAGGGCAA
GGGAGTTCTGCACCAAGAGACGCGCATCATCGGCCACAACGAAGAGAAAG
AAGGCTGGAAGACTGACTTTGATACCGCTGGCGGCGAAATCAGCATGCAG
TTCGAGGCGAACATCAACCCTTCTTGCAACCCTGTTTGCGATCTCGAAAC
CCCCGGTGGCTTGGAAGCGAGGCACAACCTTGTCATTGAATTGATCGTGG
CTGAGGAATTTTGCCCGAACCGGAACCCCAAGCTCATCACTCCTACTGGA
GCAGCGCGCGTGTTGCGCATGCAGTTCCACCTTCATGTTACGGAGCGCAG
CGGTCTTGGAATTAGCTGGGATGAAGAGATGCCTCCAGTGTACGAAGATG
TGCCTGCCAGCCCGCCTGGATACACCATGCTGGACGGCGACAGCATCATG
GAGGACTATCACGGATCCCCCATTCACCTGCCAGAGTATGAGCAATTGGA
GCGCATGGACTCCCTTCGACTGGACAGTGACTCTACTCACTCTTCCATCC
GTGGTCGGTCTCGCCTGACAACCGATGATCTGACTGCGGAGCCGACGGTA
CCTGCAGCCAGCAATCGAGCGCCGTCTGTCGATTCTCAAAGCTCAAGACA
CACGTAACGCTGTCACTTCACCGTCGACTTTCCTTCATCTATCTTCTTTT
CTTTTTCAACAAACCTGGACTCAACAGATGTCCATTCAAAGCCACGCCGC
TTACGACGTTACGATTTTTAACGAATTGGACGATTAATACATCACAGAGA
TTCGTATTCATCTCAGTTTCTTTCAACAGTCACTCAAAACAAATTGGCTT
GCCATTTCCTAATACGCTTTCTAATACCAATGGCATGGGATTAAATAAAA
AGGGGGGGGGGGGGGGGGGAATATCGAAAAAAGTTTGTGTTTTAGAAATT
TCTTTGTCTTATCACGGAGTGGGGAATTCTCAGTCCTGCATGATACCCAT
AGTCGCTACTATATGTCACACCTGGCTATTTCTTCTGTTCTGTACCTTTT
GTTCTCAACTGAGAATGTCAAGATCGCTACCAATACACCTGAATAATAGA
AATAAACAAAAAGAATAATATTCTCCGAGACGAAGCCTTTCCAGCCCCAT
CCCAAACTACC
back to top

Coding sequence (CDS) from alignment at ch1:3468015..3470675+

>KJC3_001338-T1 ID=KJC3_001338-T1|Name=KJC3_001338-T1|organism=Aspergillus niger KJC3|type=CDS|length=1599bp|location=Sequence derived from alignment at ch1:3468015..3470675+ (Aspergillus niger KJC3)
ATGCCTGGCCGTCTACTCTCCAGCTTCGTTCGCCCCTCCCTCTCTCACCA
CCACTCTCACCATTCTCCCGTCTCCCACTCCAACTCCTCGTCCTCGTCGT
CTGTGAATGAGATCCCACCGAATACTGTGGTCTCCAAGAAGCCATCCGCT
CATGGTGCGGAAAGAGCCCGTTCACCCGAGCGTCGTCTGTCTTTCGCCGT
CGAACACCTCATCCACCCCCACCGTGATCACAGCAAGGACAAGCGACGCA
GCCATGGCCGGTCCTCCCGTTCGAAGGAGCGCGCCGGACAAGAGGAAATT
GCCCATGCTCACGCTAAACTAGACGTCATCGTCGAATCCCCGCCACTTGT
GTGCTACGGATCCCCTGCGAACTCCACTGGTGCTCTCTTTTCGGGGCGTC
TGAAGATCAGCATCTCCGAGCTGGCCGGCATGGTTACCCTGGACACTTTC
GATATGCGCCTCATGAGCAGACTGACGACGAAGAAGCCTGTTTCCAGAGA
CTGCGCTAACTGCGCATCGCGCACTGAGGAGCTGACCCACTGGAACTTCC
TGACGGAGCCAATCCACCTCAAGAATGGCGACCATGAATTCCCCTTCAGC
TACCTGTTCCCCGGTCATCTACCCGCCTCCTGCAACGGTTCGCTTGGTCA
GGTCGAGTATTTCCTTTCTGCGCGTGCCCACAACATCAACGGTGAGGAAT
ACACCTACGAGATGCCCGTGCATATCAAGCGTGCCATCCTTCCCGGAAAC
GACAAGTCCTCCATCCGCATCTTCCCTCCCACCAACCTCACCGGCCGCAT
CGTTCTTCCCTCTGTGGTGCACCCGATTGGGACCTTCCCTGTTCAGATGA
CTCTGAGCGGAATTGTGGATAAAAAGGAAGACACACAGACTCGTTGGCGC
CTGCGCAAGATGATGTGGCGGATCGAAGAACACCAAAAGATCGTGTCCAC
CGCTTGCACCAAGCATGCACACAAGATTGGGGGCGAGGGCAAGGGAGTTC
TGCACCAAGAGACGCGCATCATCGGCCACAACGAAGAGAAAGAAGGCTGG
AAGACTGACTTTGATACCGCTGGCGGCGAAATCAGCATGCAGTTCGAGGC
GAACATCAACCCTTCTTGCAACCCTGTTTGCGATCTCGAAACCCCCGGTG
GCTTGGAAGCGAGGCACAACCTTGTCATTGAATTGATCGTGGCTGAGGAA
TTTTGCCCGAACCGGAACCCCAAGCTCATCACTCCTACTGGAGCAGCGCG
CGTGTTGCGCATGCAGTTCCACCTTCATGTTACGGAGCGCAGCGGTCTTG
GAATTAGCTGGGATGAAGAGATGCCTCCAGTGTACGAAGATGTGCCTGCC
AGCCCGCCTGGATACACCATGCTGGACGGCGACAGCATCATGGAGGACTA
TCACGGATCCCCCATTCACCTGCCAGAGTATGAGCAATTGGAGCGCATGG
ACTCCCTTCGACTGGACAGTGACTCTACTCACTCTTCCATCCGTGGTCGG
TCTCGCCTGACAACCGATGATCTGACTGCGGAGCCGACGGTACCTGCAGC
CAGCAATCGAGCGCCGTCTGTCGATTCTCAAAGCTCAAGACACACGTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001338KJC3_001338Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001338-T1.utr5p1KJC3_001338-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001338-T1.exon1KJC3_001338-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001338-T1.cdsKJC3_001338-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001338-T1.utr3p1KJC3_001338-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001338-T1KJC3_001338-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR014756
DBxrefInterPro:IPR014752
DBxrefInterPro:IPR024391
DBxrefPFAM:PF13002
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:3468015..3470675 +
Powered by Drupal