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KJC3_001357-T1, KJC3_001357-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001357-T1
Unique NameKJC3_001357-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:3514780..3516520+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001357-T1 ID=KJC3_001357-T1|Name=KJC3_001357-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1741bp|location=Sequence derived from alignment at ch1:3514780..3516520+ (Aspergillus niger KJC3)
CTCTTTTTCTTCACATCCCACCACCAGCTCAGTCTATAGGAGTGTTTCTG
TGTCTGTGTGATCAATTCCTCTTCTACTTTTATCTCTTTCACTCACACAC
ACCCAACACAATGTCTGTACAACTCACTCCCTCCAAGCAGGTATGTGATG
TCACGTCTCTCGCCTCCCACTTTCGACGCGTAATTAAAGGCAGATAAGCT
AACACGCGTTGCTTCCATAGGCTGCTTCCTCCCTCGAGAACCTCAAGATG
AGCGACTCGCCTGTCAAGAAGCTCAATTTCGGTGGCAAGGAGAACGCGCC
TGCCGCCGTTGACGTGACTGCCGACAAGCCCGTCGAGAAGCCCGTCGAAG
CCCCCAAGGTTGCGCCCGGTATCAAGGAGATGGAGGCCAGCGAGCCTCTG
CTTCAGGAAAATCCCCACCGTTTCGTCCTTTTCCCCATCAAGTACCATGA
GGTGAGTGACACGTCCGTTACGCGTCACGCGTAAAGTGGAATTTTGCGCT
TCCCGCCCCGCAACAATTGGCATGTGCGCTAACGCCGCATTCTCGCACCC
TACAGATCTGGCAGATGTACAAGAAGGCCGAGGCCTCTTTCTGGACCGCC
GAGGAAATTGATCTGTCCAAGGATTTGCACGACTGGCACAACCGCCTGAA
CGACGACGAGCGCTACTTCATCTCCCACGTTCTCGCGTTCTTCGCTGCCT
CCGATGGCATTGTCAACGAGAACCTTGTCGAGCGCTTCAGCGGCGAGGTC
CAGGTTCCCGAGGCTCGTTGCTTCTACGGATTCCAGATCATGATGGAGAA
CATCCACTCCGAGACCTACTCTCTCCTGATTGATACCTACATCAAGGAGC
CCAAGCAGCGCACCTACCTCTTCGACGCTATTGATACTAGTATGTACCTC
CAACCGGGGTTGTGATTGGTCAATGGATGCTAACCGCTGCAGTCCCCTGC
ATTGCCAAGAAGGCCGATTGGGCCATTAAGTGGATCCAGGACAGGGAGTC
GACCTTCGCTCAGCGTCTCGTTGCTTTCGCTGCCGTTGAGGGTATCTTCT
TCTCCGGTTCCTTCGCTTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATG
CCTGGTCTCACCTTCTCCAACGAGCTCATCTCTCGTGACGAGGGTCTGCA
CACCGACTTCGCTTGCCTGCTGTTCTCCCACCTGAACAACCGCCCCAGCA
AACAGGTTGTTGAAGACATCATCGTCGAGGCCGTCGGCATTGAGCAGGAG
TTCCTGACTGACGCTCTGCCCGTTGCTCTGCTGGGCATGAACTCCAAGCT
GATGTGTCAGTACATCGAGTTTGTCGCGGACCGCCTGCTGGTGGCCCTCG
GCAACAAGAAGTACTACAACGCCACCAACCCCTTCGACTTCATGGAGTCG
ATCTCGCTGGCGGGTAAGACCAACTTCTTCGAGAAGCGGGTAGGTGACTA
CCAGAAGGCTGGTGTCATGGCCAGCACGAAGAAGGAAGAGGAGGTCAAGA
CCAACAGCAACGGCCTCAGCTTCGATGAAGACTTCTAAACACCGAAAAAA
TGATGCCACTATACCCGGTTGTTGGCACCAGCCACGATATGTTTGATTCT
GGGTGTTTACGAGGATATTTGATTATACGCATGGGATTGGCGTTTATTGG
ATGGGATTGATTCTTTTTCTTTTTCTTATAATGTTAATGGTTGACTCTTG
TATTTAGAGAAATGTACATTGGATATTTTCTATATTGACTA
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Coding sequence (CDS) from alignment at ch1:3514780..3516520+

>KJC3_001357-T1 ID=KJC3_001357-T1|Name=KJC3_001357-T1|organism=Aspergillus niger KJC3|type=CDS|length=4764bp|location=Sequence derived from alignment at ch1:3514780..3516520+ (Aspergillus niger KJC3)
ATGTCTGTACAACTCACTCCCTCCAAGCAGGCTGCTTCCTCCCTCGAGAA
CCTCAAGATGAGCGACTCGCCTGTCAAGAAGCTCAATTTCGGTGGCAAGG
AGAACGCGCCTGCCGCCGTTGACGTGACTGCCGACAAGCCCGTCGAGAAG
CCCGTCGAAGCCCCCAAGGTTGCGCCCGGTATCAAGGAGATGGAGGCCAG
CGAGCCTCTGCTTCAGGAAAATCCCCACCGTTTCGTCCTTTTCCCCATCA
AGTACCATGAGATCTGGCAGATGTACAAGAAGGCCGAGGCCTCTTTCTGG
ACCGCCGAGGAAATTGATCTGTCCAAGGATTTGCACGACTGGCACAACCG
CCTGAACGACGACGAGCGCTACTTCATCTCCCACGTTCTCGCGTTCTTCG
CTGCCTCCGATGGCATTGTCAACGAGAACCTTGTCGAGCGCTTCAGCGGC
GAGGTCCAGGTTCCCGAGGCTCGTTGCTTCTACGGATTCCAGATCATGAT
GGAGAACATCCACTCCGAGACCTACTCTCTCCTGATTGATACCTACATCA
AGGAGCCCAAGCAGCGCACCTACCTCTTCGACGCTATTGATACTATCCCC
TGCATTGCCAAGAAGGCCGATTGGGCCATTAAGTGGATCCAGGACAGGGA
GTCGACCTTCGCTCAGCGTCTCGTTGCTTTCGCTGCCGTTGAGGGTATCT
TCTTCTCCGGTTCCTTCGCTTCCATCTTCTGGCTCAAGAAGCGTGGTCTC
ATGCCTGGTCTCACCTTCTCCAACGAGCTCATCTCTCGTGACGAGGGTCT
GCACACCGACTTCGCTTGCCTGCTGTTCTCCCACCTGAACAACCGCCCCA
GCAAACAGGTTGTTGAAGACATCATCGTCGAGGCCGTCGGCATTGAGCAG
GAGTTCCTGACTGACGCTCTGCCCGTTGCTCTGCTGGGCATGAACTCCAA
GCTGATGTGTCAGTACATCGAGTTTGTCGCGGACCGCCTGCTGGTGGCCC
TCGGCAACAAGAAGTACTACAACGCCACCAACCCCTTCGACTTCATGGAG
TCGATCTCGCTGGCGGGTAAGACCAACTTCTTCGAGAAGCGGGTAGGTGA
CTACCAGAAGGCTGGTGTCATGGCCAGCACGAAGAAGGAAGAGGAGGTCA
AGACCAACAGCAACGGCCTCAGCTTCGATGAAGACTTCTAAATGTCTGTA
CAACTCACTCCCTCCAAGCAGGCTGCTTCCTCCCTCGAGAACCTCAAGAT
GAGCGACTCGCCTGTCAAGAAGCTCAATTTCGGTGGCAAGGAGAACGCGC
CTGCCGCCGTTGACGTGACTGCCGACAAGCCCGTCGAGAAGCCCGTCGAA
GCCCCCAAGGTTGCGCCCGGTATCAAGGAGATGGAGGCCAGCGAGCCTCT
GCTTCAGGAAAATCCCCACCGTTTCGTCCTTTTCCCCATCAAGTACCATG
AGATCTGGCAGATGTACAAGAAGGCCGAGGCCTCTTTCTGGACCGCCGAG
GAAATTGATCTGTCCAAGGATTTGCACGACTGGCACAACCGCCTGAACGA
CGACGAGCGCTACTTCATCTCCCACGTTCTCGCGTTCTTCGCTGCCTCCG
ATGGCATTGTCAACGAGAACCTTGTCGAGCGCTTCAGCGGCGAGGTCCAG
GTTCCCGAGGCTCGTTGCTTCTACGGATTCCAGATCATGATGGAGAACAT
CCACTCCGAGACCTACTCTCTCCTGATTGATACCTACATCAAGGAGCCCA
AGCAGCGCACCTACCTCTTCGACGCTATTGATACTATCCCCTGCATTGCC
AAGAAGGCCGATTGGGCCATTAAGTGGATCCAGGACAGGGAGTCGACCTT
CGCTCAGCGTCTCGTTGCTTTCGCTGCCGTTGAGGGTATCTTCTTCTCCG
GTTCCTTCGCTTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGT
CTCACCTTCTCCAACGAGCTCATCTCTCGTGACGAGGGTCTGCACACCGA
CTTCGCTTGCCTGCTGTTCTCCCACCTGAACAACCGCCCCAGCAAACAGG
TTGTTGAAGACATCATCGTCGAGGCCGTCGGCATTGAGCAGGAGTTCCTG
ACTGACGCTCTGCCCGTTGCTCTGCTGGGCATGAACTCCAAGCTGATGTG
TCAGTACATCGAGTTTGTCGCGGACCGCCTGCTGGTGGCCCTCGGCAACA
AGAAGTACTACAACGCCACCAACCCCTTCGACTTCATGGAGTCGATCTCG
CTGGCGGGTAAGACCAACTTCTTCGAGAAGCGGGTAGGTGACTACCAGAA
GGCTGGTGTCATGGCCAGCACGAAGAAGGAAGAGGAGGTCAAGACCAACA
GCAACGGCCTCAGCTTCGATGAAGACTTCTAAATGTCTGTACAACTCACT
CCCTCCAAGCAGGCTGCTTCCTCCCTCGAGAACCTCAAGATGAGCGACTC
GCCTGTCAAGAAGCTCAATTTCGGTGGCAAGGAGAACGCGCCTGCCGCCG
TTGACGTGACTGCCGACAAGCCCGTCGAGAAGCCCGTCGAAGCCCCCAAG
GTTGCGCCCGGTATCAAGGAGATGGAGGCCAGCGAGCCTCTGCTTCAGGA
AAATCCCCACCGTTTCGTCCTTTTCCCCATCAAGTACCATGAGATCTGGC
AGATGTACAAGAAGGCCGAGGCCTCTTTCTGGACCGCCGAGGAAATTGAT
CTGTCCAAGGATTTGCACGACTGGCACAACCGCCTGAACGACGACGAGCG
CTACTTCATCTCCCACGTTCTCGCGTTCTTCGCTGCCTCCGATGGCATTG
TCAACGAGAACCTTGTCGAGCGCTTCAGCGGCGAGGTCCAGGTTCCCGAG
GCTCGTTGCTTCTACGGATTCCAGATCATGATGGAGAACATCCACTCCGA
GACCTACTCTCTCCTGATTGATACCTACATCAAGGAGCCCAAGCAGCGCA
CCTACCTCTTCGACGCTATTGATACTATCCCCTGCATTGCCAAGAAGGCC
GATTGGGCCATTAAGTGGATCCAGGACAGGGAGTCGACCTTCGCTCAGCG
TCTCGTTGCTTTCGCTGCCGTTGAGGGTATCTTCTTCTCCGGTTCCTTCG
CTTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTCACCTTC
TCCAACGAGCTCATCTCTCGTGACGAGGGTCTGCACACCGACTTCGCTTG
CCTGCTGTTCTCCCACCTGAACAACCGCCCCAGCAAACAGGTTGTTGAAG
ACATCATCGTCGAGGCCGTCGGCATTGAGCAGGAGTTCCTGACTGACGCT
CTGCCCGTTGCTCTGCTGGGCATGAACTCCAAGCTGATGTGTCAGTACAT
CGAGTTTGTCGCGGACCGCCTGCTGGTGGCCCTCGGCAACAAGAAGTACT
ACAACGCCACCAACCCCTTCGACTTCATGGAGTCGATCTCGCTGGCGGGT
AAGACCAACTTCTTCGAGAAGCGGGTAGGTGACTACCAGAAGGCTGGTGT
CATGGCCAGCACGAAGAAGGAAGAGGAGGTCAAGACCAACAGCAACGGCC
TCAGCTTCGATGAAGACTTCTAAATGTCTGTACAACTCACTCCCTCCAAG
CAGGCTGCTTCCTCCCTCGAGAACCTCAAGATGAGCGACTCGCCTGTCAA
GAAGCTCAATTTCGGTGGCAAGGAGAACGCGCCTGCCGCCGTTGACGTGA
CTGCCGACAAGCCCGTCGAGAAGCCCGTCGAAGCCCCCAAGGTTGCGCCC
GGTATCAAGGAGATGGAGGCCAGCGAGCCTCTGCTTCAGGAAAATCCCCA
CCGTTTCGTCCTTTTCCCCATCAAGTACCATGAGATCTGGCAGATGTACA
AGAAGGCCGAGGCCTCTTTCTGGACCGCCGAGGAAATTGATCTGTCCAAG
GATTTGCACGACTGGCACAACCGCCTGAACGACGACGAGCGCTACTTCAT
CTCCCACGTTCTCGCGTTCTTCGCTGCCTCCGATGGCATTGTCAACGAGA
ACCTTGTCGAGCGCTTCAGCGGCGAGGTCCAGGTTCCCGAGGCTCGTTGC
TTCTACGGATTCCAGATCATGATGGAGAACATCCACTCCGAGACCTACTC
TCTCCTGATTGATACCTACATCAAGGAGCCCAAGCAGCGCACCTACCTCT
TCGACGCTATTGATACTATCCCCTGCATTGCCAAGAAGGCCGATTGGGCC
ATTAAGTGGATCCAGGACAGGGAGTCGACCTTCGCTCAGCGTCTCGTTGC
TTTCGCTGCCGTTGAGGGTATCTTCTTCTCCGGTTCCTTCGCTTCCATCT
TCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTCACCTTCTCCAACGAG
CTCATCTCTCGTGACGAGGGTCTGCACACCGACTTCGCTTGCCTGCTGTT
CTCCCACCTGAACAACCGCCCCAGCAAACAGGTTGTTGAAGACATCATCG
TCGAGGCCGTCGGCATTGAGCAGGAGTTCCTGACTGACGCTCTGCCCGTT
GCTCTGCTGGGCATGAACTCCAAGCTGATGTGTCAGTACATCGAGTTTGT
CGCGGACCGCCTGCTGGTGGCCCTCGGCAACAAGAAGTACTACAACGCCA
CCAACCCCTTCGACTTCATGGAGTCGATCTCGCTGGCGGGTAAGACCAAC
TTCTTCGAGAAGCGGGTAGGTGACTACCAGAAGGCTGGTGTCATGGCCAG
CACGAAGAAGGAAGAGGAGGTCAAGACCAACAGCAACGGCCTCAGCTTCG
ATGAAGACTTCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0009263deoxyribonucleotide biosynthetic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RNR2KJC3_001357Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001357-T1KJC3_001357-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001357-T1.utr5p1KJC3_001357-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001357-T1.exon1KJC3_001357-T1.exon1Aspergillus niger KJC3exon
KJC3_001357-T1.exon2KJC3_001357-T1.exon2Aspergillus niger KJC3exon
KJC3_001357-T1.exon3KJC3_001357-T1.exon3Aspergillus niger KJC3exon
KJC3_001357-T1.exon4KJC3_001357-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001357-T1.cdsKJC3_001357-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001357-T1.utr3p1KJC3_001357-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR009078
DBxrefInterPro:IPR033909
DBxrefInterPro:IPR030475
DBxrefInterPro:IPR012348
DBxrefInterPro:IPR000358
DBxrefPFAM:PF00268
Product small subunit
ProductRibonucleotide-diphosphate reductase (RNR)
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:3514780..3516520 +
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