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KJC3_001374-T1, KJC3_001374-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001374-T1
Unique NameKJC3_001374-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:3545223..3548138-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001374-T1 ID=KJC3_001374-T1|Name=KJC3_001374-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2916bp|location=Sequence derived from alignment at ch1:3545223..3548138- (Aspergillus niger KJC3)
CTTCTTGACATCCATCCGGCATTCATGCGACAAAATCAGTTGAGGACAGG
ATTGTATCTCCAAGATGGGTCGGAGCACCTGGAGGGCTCAAAGCTGTCGG
ACTTGCCTGCTGCGCAAGGTCAAGGTGAGATGTTGTGGTCCATCGACCAA
GACAATTAGTGCTGATGCCTTACTTTCCGGGCACGCCAGTGCGACAAGAC
CCGGCCTGCTTGTATGCGGTGCCAATCCTCAGCTCGCAATTGTGGGGGCT
ATTCTGACTTGTAAGTTGTTACTACAGCCCTAGTATAGATGGAGTAATTC
GTTGATTGAATAGAAGTCACACACGTCCTATGAACACCGCCATCGCTGGA
CGGAACGGTCGATCCTTGATGGTGTACCAGCACCAAGTACAATTGGTCTC
GATCTTTCTCCGCGACTACTTACCCCCGGAGGCTCCAGATTCGACAAAGC
ACCAGTCGCCTGTCCACTGGGTAGAATTGTTTTCTTCCTTCGTTCAGTCC
GAGTCGCCAGTCGTCAGGACAGCCCTCGCTGCATTGACACTTGTACATAT
GGCCTCCTTGCAACAGGACGACGCGCTGGCACATTACAGCAGACACTATT
ATGTGCAAGCAATGCAGCAAATATGTGCACTAACAGAAGTAGACTACTGC
TCTGATCTCGTCCGCACTGCCATGATCCTTGCACTCTACGAGGTCTGCGC
ACAACCGTCAGGGCAAGACCATGCATGGAGCGTCCACGTTCAGGCAGCCT
GCAATTTAGCTAGTGAATCCAACACCGCTACGGAGATGTTAACGGCGCAG
GATTTGCGTCGGCTCCGTACTATTGAGGTAGGTTCATCTTCATCCATGAC
CTGGCACGTCTAATTGACCGCCTTCAGTATCTTCATATATGTACCAATAT
CAATCATGAGCCTTATTTCACCTTGCTCTCACATGCACAGCCGTCAGCTA
ATAGGTTTGACATACTCCTCGATATACTGTACGAGTTAGGTCAACTACAC
AGCTATTCACAACAAGAGCTTCGTCGCAACAAGATTACGTGGGAATCTGC
AACATTCTTGATACGAGTGTCTGTCATTCTCGAGCGAAAGCTCTTGCACT
GGAATCACGAATGGCAGTCGGAAAGCCGCTATCCTTTGTTCATGATCGTG
CCACCCACAGCGGGACCCACGGCCACACCGTCCGGCAAGCCGGAAGAGAA
GATGTTTATACCGAGAGCTGATGATATACCGCTGTTATTGTTCTACTGGC
TGGGAATGACAATGGTTTATGCTACGATAGCTAAGGTATTGCGAGGAATC
CAAGATGTTCAGCATGTACCTGCAACGATGTTAGAGCGACGTCTGGCGAA
GGCTACCGGTCTCTGCCATCGCTTTGTTGGCCGCATATCCCAGTGCCAGG
TGGGATGCGCAGACAAGGGGCTGGGGACTATTATACTGGCAGCGGCGGTA
GGCCAAGCAGCGCAGAAACTACAGTGTCGACTGTAGCAGCAAGCTTATTG
CTCGTTCAATGCTAAAGGCGATAATTACATACACACTCCATGATCTGTCA
TTTAACCATCTCACAATCAAATACCATGAACCAACAAATGTGATTTGGCA
GCATACGGTGATTATGGCGTAGGAAAGATTCAGTATTCGAACTTCTGGCC
GACAATCTCCTCGCTTAGCTTCCACAGCCTTTCTGCATTTTTCGGATCCA
GAGCATATTCCACCGCCTCGTCATTGTTTACTTGATTATTGACCATATAC
GAGCCGTTTTTGTCTGCAATTCGTTACCATCTACCCGCCCATATTGGTGA
AGCGTGCTTACCAGAATTGCTAGGATCATATGCTGCTACAATCAAGGTGG
CAGCTCCCTGGCTGGCAGTTCTCCAGTTCAGCTTAGGGTCATCATTGATA
CTTCCATCCTCATGTTTCCACCCTTGAGTCATCGAGTTAGCATCCTTCAC
ACTACCGGACAATTGGCTGTCACATCAGAAGTTCTACATACCAGCCTTGA
CCCATTCTTCTGGCTTCAAATGTCTTCCGATGCCAGTCTCTCGTCGGCCA
GGATAAAGACTGAATGACTCCACTCCTTTGTTCCCAGCCTTCTCCGCCAG
TGATACCGAGAAGAGCATGTTAGCCGTCTTACTCTGGCCGTATGCCTGCC
ACTTGTCATAGCATTTCCCATTCTACCATAGCGTCAATTAAATCTCCCTT
GCTCGCGTGCAACCGAACGAAAGAATAAACCACGGGACTGCACAAACCTC
GAAATTCACATCCCCAAACCTCACAGGTCCACGCTTATGGCCGGCACTAC
TGACATTCACGACCCGAACCTTGGACTCCCCGCTCATGATCTTCTCCAAG
AGCAGGTTCGTGAATAGGAAGTGGCCAATGTGATTTATTCCAAACTGCAG
TTCCACTCCCTCTGGCGTGGTCGAGTACGGTGCCGCCATGATGCCTGCGT
TGTTGATAAGATGGTCAAGGCGCTCTGGATAGTTATTCACCTCCGCAGCT
GCCCTGCGGACGCTTTCCTGCGAGCTCAAATCTATAATGAGCAGTCGGGT
GTTGGCATCCGGTGTCTCGGCTTTGATGGCATTTTCGGTGGCCTGGAGAG
TCTCCAGGTTGCGACCAGCCAGGACCAAGAGAGCCGGCGCGTGGCGGGAG
AGCTGAAGAGCCGCCTCGCCGCCAACACTGCCGAGTGTGACGCCAGTAAT
GAGGACTGAGAGGTTAGATTCTTCTTATGATCCGGAAATACTGAGGAGGG
ATGGTTGGACGTACCTTTGCTCCCTTTGATGTGGTCCGCCAGGACTTGGC
AGACTTCTTCACTGGTGGATTGTGCGGAAAAGGATGGCATGTTGACAACG
ATTCTGATGCTTTCTAGACTGGGAAGATGAGATTTGCAATGCCATGCTGA
GGTCCTTAAATAGCTG
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Coding sequence (CDS) from alignment at ch1:3545223..3548138-

>KJC3_001374-T1 ID=KJC3_001374-T1|Name=KJC3_001374-T1|organism=Aspergillus niger KJC3|type=CDS|length=5004bp|location=Sequence derived from alignment at ch1:3545223..3548138- (Aspergillus niger KJC3)
TATCTTCATATATGTACCAATATCAATCATGAGCCTTATTTCACCTTGCT
CTCACATGCACAGCCGTCAGCTAATAGGTTTGACATACTCCTCGATATAC
TGTACGAGTTAGGTCAACTACACAGCTATTCACAACAAGAGCTTCGTCGC
AACAAGATTACGTGGGAATCTGCAACATTCTTGATACGAGTGTCTGTCAT
TCTCGAGCGAAAGCTCTTGCACTGGAATCACGAATGGCAGTCGGAAAGCC
GCTATCCTTTGTTCATGATCGTGCCACCCACAGCGGGACCCACGGCCACA
CCGTCCGGCAAGCCGGAAGAGAAGATGTTTATACCGAGAGCTGATGATAT
ACCGCTGTTATTGTTCTACTGGCTGGGAATGACAATGGTTTATGCTACGA
TAGCTAAGGTATTGCGAGGAATCCAAGATGTTCAGCATGTACCTGCAACG
ATGTTAGAGCGACGTCTGGCGAAGGCTACCGGTCTCTGCCATCGCTTTGT
TGGCCGCATATCCCAGTGCCAGGTGGGATGCGCAGACAAGGGGCTGGGGA
CTATTATACTGGCAGCGGCGGTAGGCCAAGCAGCGCAGAAACTACAGTGT
CGACTGTAGTCACACACGTCCTATGAACACCGCCATCGCTGGACGGAACG
GTCGATCCTTGATGGTGTACCAGCACCAAGTACAATTGGTCTCGATCTTT
CTCCGCGACTACTTACCCCCGGAGGCTCCAGATTCGACAAAGCACCAGTC
GCCTGTCCACTGGGTAGAATTGTTTTCTTCCTTCGTTCAGTCCGAGTCGC
CAGTCGTCAGGACAGCCCTCGCTGCATTGACACTTGTACATATGGCCTCC
TTGCAACAGGACGACGCGCTGGCACATTACAGCAGACACTATTATGTGCA
AGCAATGCAGCAAATATGTGCACTAACAGAAGTAGACTACTGCTCTGATC
TCGTCCGCACTGCCATGATCCTTGCACTCTACGAGGTCTGCGCACAACCG
TCAGGGCAAGACCATGCATGGAGCGTCCACGTTCAGGCAGCCTGCAATTT
AGCTAGTGAATCCAACACCGCTACGGAGATGTTAACGGCGCAGGATTTGC
GTCGGCTCCGTACTATTGAGTGCGACAAGACCCGGCCTGCTTGTATGCGG
TGCCAATCCTCAGCTCGCAATTGTGGGGGCTATTCTGACTTATGGGTCGG
AGCACCTGGAGGGCTCAAAGCTGTCGGACTTGCCTGCTGCGCAAGGTCAA
GTATCTTCATATATGTACCAATATCAATCATGAGCCTTATTTCACCTTGC
TCTCACATGCACAGCCGTCAGCTAATAGGTTTGACATACTCCTCGATATA
CTGTACGAGTTAGGTCAACTACACAGCTATTCACAACAAGAGCTTCGTCG
CAACAAGATTACGTGGGAATCTGCAACATTCTTGATACGAGTGTCTGTCA
TTCTCGAGCGAAAGCTCTTGCACTGGAATCACGAATGGCAGTCGGAAAGC
CGCTATCCTTTGTTCATGATCGTGCCACCCACAGCGGGACCCACGGCCAC
ACCGTCCGGCAAGCCGGAAGAGAAGATGTTTATACCGAGAGCTGATGATA
TACCGCTGTTATTGTTCTACTGGCTGGGAATGACAATGGTTTATGCTACG
ATAGCTAAGGTATTGCGAGGAATCCAAGATGTTCAGCATGTACCTGCAAC
GATGTTAGAGCGACGTCTGGCGAAGGCTACCGGTCTCTGCCATCGCTTTG
TTGGCCGCATATCCCAGTGCCAGGTGGGATGCGCAGACAAGGGGCTGGGG
ACTATTATACTGGCAGCGGCGGTAGGCCAAGCAGCGCAGAAACTACAGTG
TCGACTGTAGTCACACACGTCCTATGAACACCGCCATCGCTGGACGGAAC
GGTCGATCCTTGATGGTGTACCAGCACCAAGTACAATTGGTCTCGATCTT
TCTCCGCGACTACTTACCCCCGGAGGCTCCAGATTCGACAAAGCACCAGT
CGCCTGTCCACTGGGTAGAATTGTTTTCTTCCTTCGTTCAGTCCGAGTCG
CCAGTCGTCAGGACAGCCCTCGCTGCATTGACACTTGTACATATGGCCTC
CTTGCAACAGGACGACGCGCTGGCACATTACAGCAGACACTATTATGTGC
AAGCAATGCAGCAAATATGTGCACTAACAGAAGTAGACTACTGCTCTGAT
CTCGTCCGCACTGCCATGATCCTTGCACTCTACGAGGTCTGCGCACAACC
GTCAGGGCAAGACCATGCATGGAGCGTCCACGTTCAGGCAGCCTGCAATT
TAGCTAGTGAATCCAACACCGCTACGGAGATGTTAACGGCGCAGGATTTG
CGTCGGCTCCGTACTATTGAGTGCGACAAGACCCGGCCTGCTTGTATGCG
GTGCCAATCCTCAGCTCGCAATTGTGGGGGCTATTCTGACTTATGGGTCG
GAGCACCTGGAGGGCTCAAAGCTGTCGGACTTGCCTGCTGCGCAAGGTCA
AGTATCTTCATATATGTACCAATATCAATCATGAGCCTTATTTCACCTTG
CTCTCACATGCACAGCCGTCAGCTAATAGGTTTGACATACTCCTCGATAT
ACTGTACGAGTTAGGTCAACTACACAGCTATTCACAACAAGAGCTTCGTC
GCAACAAGATTACGTGGGAATCTGCAACATTCTTGATACGAGTGTCTGTC
ATTCTCGAGCGAAAGCTCTTGCACTGGAATCACGAATGGCAGTCGGAAAG
CCGCTATCCTTTGTTCATGATCGTGCCACCCACAGCGGGACCCACGGCCA
CACCGTCCGGCAAGCCGGAAGAGAAGATGTTTATACCGAGAGCTGATGAT
ATACCGCTGTTATTGTTCTACTGGCTGGGAATGACAATGGTTTATGCTAC
GATAGCTAAGGTATTGCGAGGAATCCAAGATGTTCAGCATGTACCTGCAA
CGATGTTAGAGCGACGTCTGGCGAAGGCTACCGGTCTCTGCCATCGCTTT
GTTGGCCGCATATCCCAGTGCCAGGTGGGATGCGCAGACAAGGGGCTGGG
GACTATTATACTGGCAGCGGCGGTAGGCCAAGCAGCGCAGAAACTACAGT
GTCGACTGTAGTCACACACGTCCTATGAACACCGCCATCGCTGGACGGAA
CGGTCGATCCTTGATGGTGTACCAGCACCAAGTACAATTGGTCTCGATCT
TTCTCCGCGACTACTTACCCCCGGAGGCTCCAGATTCGACAAAGCACCAG
TCGCCTGTCCACTGGGTAGAATTGTTTTCTTCCTTCGTTCAGTCCGAGTC
GCCAGTCGTCAGGACAGCCCTCGCTGCATTGACACTTGTACATATGGCCT
CCTTGCAACAGGACGACGCGCTGGCACATTACAGCAGACACTATTATGTG
CAAGCAATGCAGCAAATATGTGCACTAACAGAAGTAGACTACTGCTCTGA
TCTCGTCCGCACTGCCATGATCCTTGCACTCTACGAGGTCTGCGCACAAC
CGTCAGGGCAAGACCATGCATGGAGCGTCCACGTTCAGGCAGCCTGCAAT
TTAGCTAGTGAATCCAACACCGCTACGGAGATGTTAACGGCGCAGGATTT
GCGTCGGCTCCGTACTATTGAGTGCGACAAGACCCGGCCTGCTTGTATGC
GGTGCCAATCCTCAGCTCGCAATTGTGGGGGCTATTCTGACTTATGGGTC
GGAGCACCTGGAGGGCTCAAAGCTGTCGGACTTGCCTGCTGCGCAAGGTC
AAGTATCTTCATATATGTACCAATATCAATCATGAGCCTTATTTCACCTT
GCTCTCACATGCACAGCCGTCAGCTAATAGGTTTGACATACTCCTCGATA
TACTGTACGAGTTAGGTCAACTACACAGCTATTCACAACAAGAGCTTCGT
CGCAACAAGATTACGTGGGAATCTGCAACATTCTTGATACGAGTGTCTGT
CATTCTCGAGCGAAAGCTCTTGCACTGGAATCACGAATGGCAGTCGGAAA
GCCGCTATCCTTTGTTCATGATCGTGCCACCCACAGCGGGACCCACGGCC
ACACCGTCCGGCAAGCCGGAAGAGAAGATGTTTATACCGAGAGCTGATGA
TATACCGCTGTTATTGTTCTACTGGCTGGGAATGACAATGGTTTATGCTA
CGATAGCTAAGGTATTGCGAGGAATCCAAGATGTTCAGCATGTACCTGCA
ACGATGTTAGAGCGACGTCTGGCGAAGGCTACCGGTCTCTGCCATCGCTT
TGTTGGCCGCATATCCCAGTGCCAGGTGGGATGCGCAGACAAGGGGCTGG
GGACTATTATACTGGCAGCGGCGGTAGGCCAAGCAGCGCAGAAACTACAG
TGTCGACTGTAGTCACACACGTCCTATGAACACCGCCATCGCTGGACGGA
ACGGTCGATCCTTGATGGTGTACCAGCACCAAGTACAATTGGTCTCGATC
TTTCTCCGCGACTACTTACCCCCGGAGGCTCCAGATTCGACAAAGCACCA
GTCGCCTGTCCACTGGGTAGAATTGTTTTCTTCCTTCGTTCAGTCCGAGT
CGCCAGTCGTCAGGACAGCCCTCGCTGCATTGACACTTGTACATATGGCC
TCCTTGCAACAGGACGACGCGCTGGCACATTACAGCAGACACTATTATGT
GCAAGCAATGCAGCAAATATGTGCACTAACAGAAGTAGACTACTGCTCTG
ATCTCGTCCGCACTGCCATGATCCTTGCACTCTACGAGGTCTGCGCACAA
CCGTCAGGGCAAGACCATGCATGGAGCGTCCACGTTCAGGCAGCCTGCAA
TTTAGCTAGTGAATCCAACACCGCTACGGAGATGTTAACGGCGCAGGATT
TGCGTCGGCTCCGTACTATTGAGTGCGACAAGACCCGGCCTGCTTGTATG
CGGTGCCAATCCTCAGCTCGCAATTGTGGGGGCTATTCTGACTTATGGGT
CGGAGCACCTGGAGGGCTCAAAGCTGTCGGACTTGCCTGCTGCGCAAGGT
CAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001374KJC3_001374Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001374-T1KJC3_001374-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001374-T1.cdsKJC3_001374-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001374-T1.utr3p1KJC3_001374-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001374-T1.exon4KJC3_001374-T1.exon4Aspergillus niger KJC3exon
KJC3_001374-T1.exon3KJC3_001374-T1.exon3Aspergillus niger KJC3exon
KJC3_001374-T1.exon2KJC3_001374-T1.exon2Aspergillus niger KJC3exon
KJC3_001374-T1.exon1KJC3_001374-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001374-T1.utr5p1KJC3_001374-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR021858
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:3545223..3548138 -
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