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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:3597983..3599952+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001399-T1 ID=KJC3_001399-T1|Name=KJC3_001399-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1970bp|location=Sequence derived from alignment at ch1:3597983..3599952+ (Aspergillus niger KJC3)
TTGGAACAGTGTCATCCTTGCCATTTCACGTCGTGACCTTGTGGTTTTAC
GCAAGACTGCCGTCGCCAGAATGATTGCCAACCTAGCCATTGTAGTGGTC
TTCAGCATTGGTGTGATAACCCTCCTATATGTGATCACCTCGCATCAGCC
CAACAGAAGAGCAGCAACTGATGAGAAGCGACCACCTCTCAAGCTCCCGC
TGATCGGGGATCTTCACAGCTCTCCGATCGATAAGCCCCTCGCCAACTGG
GACGACTGGGCGCGACAAAATGGGCCCATCACCGTTTCTAAATTATTTGG
GATCGTCCCAATCGTGGTACTTAACTCTTACGAGGCGGCCACAGAATTGT
TCAGTCGCCGCAGCCAGTGGTATAGCAACCGGCCGCGTTCGGCGACAATG
GAGATGATCACCGGAGCAAAGCCCGGACAGTCTCGATTCACTTTGATGCA
CGACTACGACGATTACCTCAGGCTGCATCACAGATTACTGGCTCCCAGTC
TCGGGGCCCTCGCGGCGCCGAGGTATCAGCCGTTAATGGAATTAGAGAAC
AACCAGTTGCTCTGTGACTTGTGTGATGCTCTTCACGGGTGTCCTGATGG
CGCCACCATTAGCACCGCGACGATTTATCCCCTCCTGGAACGCACCCAAT
CGAGTATTATTCTGGGATTACATTACGGCCTGCGCATCCTCCACCCCGAA
GACGATCTTCTGCAGGAGATCATCGGTACTCAGGCCCAAGTGACCCATCT
GGCTGCTAATCCTGGCCTACCAGATCTCATTCCAACCTTGCGTCAACTCC
CTGGATTTCTTTCCCCCTGGAAGCGTGCAGCCGATGAGCTGTTCGCAACC
CAATCAAACCTCTACATGCGTCTCTTTCATCGAGGAAGGGATTCAGACAG
CTGGAACGCCACAAAGCAAGCCCTTGCAACGGCCGAGAGGTACACTGCTG
TACCAGATCTCGACCTTGCCTTCACTCTGGCTACATCTATCCAAGGTGGG
ATGGAGACATCTCCCCGTCAAATGCTATGGCTGTTCATTGCGATGCTGCA
CCGACCCTCCGTTCTCTCTCGGGCACATGCCGTGCTTGACGCAGTGGTGG
GACGAAGTCGAGCGCCGCGATTCTCCGACCGACCAAAGCTGGTATATATC
GATGCCATTGCTCATGAGCTCTTCCGCTGGCGGCCCATCTCGCCCGGCTC
CATCCCGCGACGGGCCGACCGGGACGATGAGTTCCAGGGGGTGAAGATTA
GCCAAGGTGTCACCATCATGGCCAATGCATGGGCCGTTGGCCGAGATGCA
CAGATTTTTAATTCCGCCCTGGGCGATCTCCCCGACTTCGTGCCTGACAG
GTGGCTGCTGCAAGGTAACCCCCACAACGCAGAGGCTCAGCTACGGTCGG
ATCTCCCGCTGCCCGTGTTTGGGCAGGGTCGACGCATCTGCCAGGGCAAG
AGAATTGCTACGGATGGAGCGTTTCTGCAGGTAGCCAATTTGTTGTGGGC
ATTTGATATCATGTCCGCGGAAGGGGAAGAGATGGACCCATGGGCCATGA
CTGTCGTGGGGTTCATGACGATGCCCAAGGAGCTGAAGATGCGGCTGAAG
CCTCGAGGTGACTGGGTGATGGAGGCCATCAAACGGGAACCCAAGATCGG
GTCGGAGGACCTGGATCAAGTCATGGGGTCTGTCAACGATGTGGAGAGGT
GACTGGAAATAATATTGCGTTTAATGTGGAGAGGTACCCTCGGTTATGGA
ACCGATGGGCATCGGTTAAGGGATGCTCTAACGTCACGGCCTGAAAGCAC
GGTCTATCAACATGATAGATGAGTGGGAGAAGGGTGTCTAGAGGAAAGTA
AGAATAAAGTTGGCTATGAAAGTAAGCTTGAAACTGTAACTTTATTGTTG
TGCGACACGATTTGGAGATGCCGCCCGATCGCCGAATAGAAAAAGCAAAG
GGCAACAAAGAACATTAAAG back to topCoding sequence (CDS) from alignment at ch1:3597983..3599952+ >KJC3_001399-T1 ID=KJC3_001399-T1|Name=KJC3_001399-T1|organism=Aspergillus niger KJC3|type=CDS|length=1305bp|location=Sequence derived from alignment at ch1:3597983..3599952+ (Aspergillus niger KJC3)
ATGGAGATGATCACCGGAGCAAAGCCCGGACAGTCTCGATTCACTTTGAT
GCACGACTACGACGATTACCTCAGGCTGCATCACAGATTACTGGCTCCCA
GTCTCGGGGCCCTCGCGGCGCCGAGGTATCAGCCGTTAATGGAATTAGAG
AACAACCAGTTGCTCTGTGACTTGTGTGATGCTCTTCACGGGTGTCCTGA
TGGCGCCACCATTAGCACCGCGACGATTTATCCCCTCCTGGAACGCACCC
AATCGAGTATTATTCTGGGATTACATTACGGCCTGCGCATCCTCCACCCC
GAAGACGATCTTCTGCAGGAGATCATCGGTACTCAGGCCCAAGTGACCCA
TCTGGCTGCTAATCCTGGCCTACCAGATCTCATTCCAACCTTGCGTCAAC
TCCCTGGATTTCTTTCCCCCTGGAAGCGTGCAGCCGATGAGCTGTTCGCA
ACCCAATCAAACCTCTACATGCGTCTCTTTCATCGAGGAAGGGATTCAGA
CAGCTGGAACGCCACAAAGCAAGCCCTTGCAACGGCCGAGAGGTACACTG
CTGTACCAGATCTCGACCTTGCCTTCACTCTGGCTACATCTATCCAAGGT
GGGATGGAGACATCTCCCCGTCAAATGCTATGGCTGTTCATTGCGATGCT
GCACCGACCCTCCGTTCTCTCTCGGGCACATGCCGTGCTTGACGCAGTGG
TGGGACGAAGTCGAGCGCCGCGATTCTCCGACCGACCAAAGCTGGTATAT
ATCGATGCCATTGCTCATGAGCTCTTCCGCTGGCGGCCCATCTCGCCCGG
CTCCATCCCGCGACGGGCCGACCGGGACGATGAGTTCCAGGGGGTGAAGA
TTAGCCAAGGTGTCACCATCATGGCCAATGCATGGGCCGTTGGCCGAGAT
GCACAGATTTTTAATTCCGCCCTGGGCGATCTCCCCGACTTCGTGCCTGA
CAGGTGGCTGCTGCAAGGTAACCCCCACAACGCAGAGGCTCAGCTACGGT
CGGATCTCCCGCTGCCCGTGTTTGGGCAGGGTCGACGCATCTGCCAGGGC
AAGAGAATTGCTACGGATGGAGCGTTTCTGCAGGTAGCCAATTTGTTGTG
GGCATTTGATATCATGTCCGCGGAAGGGGAAGAGATGGACCCATGGGCCA
TGACTGTCGTGGGGTTCATGACGATGCCCAAGGAGCTGAAGATGCGGCTG
AAGCCTCGAGGTGACTGGGTGATGGAGGCCATCAAACGGGAACCCAAGAT
CGGGTCGGAGGACCTGGATCAAGTCATGGGGTCTGTCAACGATGTGGAGA
GGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0020037 | heme binding |
| GO:0005506 | iron ion binding |
| GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001399-T1.utr3p1 | KJC3_001399-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR001128 |
| DBxref | InterPro:IPR036396 |
| DBxref | InterPro:IPR002401 |
| DBxref | PFAM:PF00067 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:3597983..3599952 + |
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