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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:3681713..3683868+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001423-T1 ID=KJC3_001423-T1|Name=KJC3_001423-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2156bp|location=Sequence derived from alignment at ch1:3681713..3683868+ (Aspergillus niger KJC3)
ATGGTGTTGAGGTACCACCCATGCCCTTCCATTTCGGAGCTCATACCGGA
TGAAGATACTCTAGAGTTGTACCGACAACACGAGCTCGCTGGCCATGGCG
AGACAGGTTTAAGTGGATTGAGTCTGAAGGAGAAGCAGGTTATCGAGCGG
CTCCAGGCCCGGCAACAGGACCTGCCGTTACTGAACATGCTTCTTCAGGT
GCTGCGGATTCCTGGGCTCCGTCCTGGGTTCATGGCGGGAAACATCAACC
GATTGCTGCGTATGAAATGCCCACATGTAGGAAACCCGCAACATCCCAAA
TGTTGCAGATCAACCAGAAATGCAGACTGACATAGTGCAAGGAGCATGCG
CATTACATCCAGCACATCCTGAATGTCTGGGCCTATATCATGGGCCCCCA
ACATGTCTCCGATTTGGATGCCGAATCTGTTCGGCTGTTGCAGGGCCGGT
CGCCGGTATGGTCTACCACTGACCACGATTTTATCAGGCGCCTCCTGTCG
ATAGGCGTACTCTTTCCGGGAGTGACAGACCCAGAGAGACGTGCGCTCCT
TGCCCGTCGGCTTCTTTCTGTAGCGACTATCATTCCGTCGCTACGCACGT
TTATGGAGGATACGAAATATCTCCTGCCGTGTGCGCTGGCATTGCGAAGG
CTCATCCCAGATGCTCCTGGGGATACAATCCAAACTTGCCTCTGGCACTA
TTACAGCGCACCCGAACCGCATACAAAAAATGGCCGAGCGACGTTCCTCC
ACGCATACCGACGGTTATGGCTATTCACCATGCGGTGCTTCCCCCATCTG
GTCAGCATCATGCCTCTACGCGACCGTCGTGGAGCAGCAAAACATGTCCA
TCGATCGCGGGAGAAATCTAAGCGCTGTTGGACGGCCCTGGCTCATCTTG
CGTGGTCGCAGGGCTTTCGTACACCCAAAATTGCTGCGATACTCCAGCAG
TGGGGGTTCCGACCAGTTCAATGTCAACGCCAGGGACACTTCCAAGAGCC
CCACTTAACCCGAAATGGGACAGGCCCCTGGAAGCTGCGCCATCGGTCCG
GCATGCCCTCTGAAATGGCTTTTTTGCAAAGTCAGCCGTTCCTGACGCTG
CACAATATAGACACCCACCGGGATTGTGTTGCAGGAGAGGACCTAACTCC
ATATGCGGTCGCTCGGGACATCTTTCAGGCGTTCCTTGGCAACCTTCCAA
CCTTATCCGAACCGGTCGCAAATGCGTCCCTGCACACGTACAAGGCCCGA
AACAAGGAGCATAGATTCCTTCCATCTCAGCCTGTTGCCACCTTTCATAG
CCCAGATCACAGTGTGCATCTCTTATCCCCCTCCATGTGTCACGAGCCAA
GGAGGGTCCTCGCCACCAATGGCAGTCACCTGGAAACGGATAGGCGGAGG
ACTAGTGCCGAGCCGCTGCTGCACGATGTATGGCAGAATGGTAACACACC
CGGGCAACGAATCGATTACAGCCCGTCTAGCTATGGTTCCCCAGCCGCCT
CATCACATGGTGAGCCACCCAGGAGGCCGCTCTTTGATTCGGCGGAGCTG
GTACGGATAGGCGACAGTAATCCCTTCAGTTCATCCAGCACACGAATAAA
TTCTCCCCACCCCCAACATACACCAGTACACAAATGTCCTCCAATCGCGG
TGGCACCGGTTGCTGGCCCGTCGCACTCTCGGCTCGGGCTTCTAGGGTGG
AAGACTCGGAAGAGGCCGCAAGACCTGTCATCGCCAGGATCATCAGGAGC
AGAGGGTAAAGGCATTCTGTACGAGATGGGAACACCGGCAACTGTGTACT
ATTTGCCTTTGCCCCGCGCGCGTCGCCTTTTTAAGCAATACCTTGACAGC
CATCCTCACTTCGTCTATGCAAGACTGACCTCTAAAGGGCACCGCCTAGT
TGATCCGGCAGCCGTTCCTGGCCACCTGAGACATGCTGTGGTGGTTGCCG
GTCCCAAGCAATTAATGTCCCTATGTGATGAAGATAATGCGCTGATAGAA
GACAAGGACGAGCACTGTGCACAAGATGCGCAAGCCTAAGAACATCATAT
CATGAACAGTGTCCGAACACGAAATTCAATTTATGCTGATTGCATGCGTT
TTGAGCTGTACAGTGGTCCATGTACATGTAATCAGCAGATTTCGCGTCTA
GCAGGT back to topCoding sequence (CDS) from alignment at ch1:3681713..3683868+ >KJC3_001423-T1 ID=KJC3_001423-T1|Name=KJC3_001423-T1|organism=Aspergillus niger KJC3|type=CDS|length=3948bp|location=Sequence derived from alignment at ch1:3681713..3683868+ (Aspergillus niger KJC3)
ATGGTGTTGAGGTACCACCCATGCCCTTCCATTTCGGAGCTCATACCGGA
TGAAGATACTCTAGAGTTGTACCGACAACACGAGCTCGCTGGCCATGGCG
AGACAGGTTTAAGTGGATTGAGTCTGAAGGAGAAGCAGGTTATCGAGCGG
CTCCAGGCCCGGCAACAGGACCTGCCGTTACTGAACATGCTTCTTCAGGT
GCTGCGGATTCCTGGGCTCCGTCCTGGGTTCATGGCGGGAAACATCAACC
GATTGCTGCGTATGAAATGCCCACATGAGCATGCGCATTACATCCAGCAC
ATCCTGAATGTCTGGGCCTATATCATGGGCCCCCAACATGTCTCCGATTT
GGATGCCGAATCTGTTCGGCTGTTGCAGGGCCGGTCGCCGGTATGGTCTA
CCACTGACCACGATTTTATCAGGCGCCTCCTGTCGATAGGCGTACTCTTT
CCGGGAGTGACAGACCCAGAGAGACGTGCGCTCCTTGCCCGTCGGCTTCT
TTCTGTAGCGACTATCATTCCGTCGCTACGCACGTTTATGGAGGATACGA
AATATCTCCTGCCGTGTGCGCTGGCATTGCGAAGGCTCATCCCAGATGCT
CCTGGGGATACAATCCAAACTTGCCTCTGGCACTATTACAGCGCACCCGA
ACCGCATACAAAAAATGGCCGAGCGACGTTCCTCCACGCATACCGACGGT
TATGGCTATTCACCATGCGGTGCTTCCCCCATCTGGTCAGCATCATGCCT
CTACGCGACCGTCGTGGAGCAGCAAAACATGTCCATCGATCGCGGGAGAA
ATCTAAGCGCTGTTGGACGGCCCTGGCTCATCTTGCGTGGTCGCAGGGCT
TTCGTACACCCAAAATTGCTGCGATACTCCAGCAGTGGGGGTTCCGACCA
GTTCAATGTCAACGCCAGGGACACTTCCAAGAGCCCCACTTAACCCGAAA
TGGGACAGGCCCCTGGAAGCTGCGCCATCGGTCCGGCATGCCCTCTGAAA
TGGCTTTTTTGCAAAGTCAGCCGTTCCTGACGCTGCACAATATAGACACC
CACCGGGATTGTGTTGCAGGAGAGGACCTAACTCCATATGCGGTCGCTCG
GGACATCTTTCAGGCGTTCCTTGGCAACCTTCCAACCTTATCCGAACCGG
TCGCAAATGCGTCCCTGCACACGTACAAGGCCCGAAACAAGGAGCATAGA
TTCCTTCCATCTCAGCCTGTTGCCACCTTTCATAGCCCAGATCACAGTGT
GCATCTCTTATCCCCCTCCATGTGTCACGAGCCAAGGAGGGTCCTCGCCA
CCAATGGCAGTCACCTGGAAACGGATAGGCGGAGGACTAGTGCCGAGCCG
CTGCTGCACGATGTATGGCAGAATGGTAACACACCCGGGCAACGAATCGA
TTACAGCCCGTCTAGCTATGGTTCCCCAGCCGCCTCATCACATGGTGAGC
CACCCAGGAGGCCGCTCTTTGATTCGGCGGAGCTGGTACGGATAGGCGAC
AGTAATCCCTTCAGTTCATCCAGCACACGAATAAATTCTCCCCACCCCCA
ACATACACCAGTACACAAATGTCCTCCAATCGCGGTGGCACCGGTTGCTG
GCCCGTCGCACTCTCGGCTCGGGCTTCTAGGGTGGAAGACTCGGAAGAGG
CCGCAAGACCTGTCATCGCCAGGATCATCAGGAGCAGAGGGTAAAGGCAT
TCTGTACGAGATGGGAACACCGGCAACTGTGTACTATTTGCCTTTGCCCC
GCGCGCGTCGCCTTTTTAAGCAATACCTTGACAGCCATCCTCACTTCGTC
TATGCAAGACTGACCTCTAAAGGGCACCGCCTAGTTGATCCGGCAGCCGT
TCCTGGCCACCTGAGACATGCTGTGGTGGTTGCCGGTCCCAAGCAATTAA
TGTCCCTATGTGATGAAGATAATGCGCTGATAGAAGACAAGGACGAGCAC
TGTGCACAAGATGCGCAAGCCTAAATGGTGTTGAGGTACCACCCATGCCC
TTCCATTTCGGAGCTCATACCGGATGAAGATACTCTAGAGTTGTACCGAC
AACACGAGCTCGCTGGCCATGGCGAGACAGGTTTAAGTGGATTGAGTCTG
AAGGAGAAGCAGGTTATCGAGCGGCTCCAGGCCCGGCAACAGGACCTGCC
GTTACTGAACATGCTTCTTCAGGTGCTGCGGATTCCTGGGCTCCGTCCTG
GGTTCATGGCGGGAAACATCAACCGATTGCTGCGTATGAAATGCCCACAT
GAGCATGCGCATTACATCCAGCACATCCTGAATGTCTGGGCCTATATCAT
GGGCCCCCAACATGTCTCCGATTTGGATGCCGAATCTGTTCGGCTGTTGC
AGGGCCGGTCGCCGGTATGGTCTACCACTGACCACGATTTTATCAGGCGC
CTCCTGTCGATAGGCGTACTCTTTCCGGGAGTGACAGACCCAGAGAGACG
TGCGCTCCTTGCCCGTCGGCTTCTTTCTGTAGCGACTATCATTCCGTCGC
TACGCACGTTTATGGAGGATACGAAATATCTCCTGCCGTGTGCGCTGGCA
TTGCGAAGGCTCATCCCAGATGCTCCTGGGGATACAATCCAAACTTGCCT
CTGGCACTATTACAGCGCACCCGAACCGCATACAAAAAATGGCCGAGCGA
CGTTCCTCCACGCATACCGACGGTTATGGCTATTCACCATGCGGTGCTTC
CCCCATCTGGTCAGCATCATGCCTCTACGCGACCGTCGTGGAGCAGCAAA
ACATGTCCATCGATCGCGGGAGAAATCTAAGCGCTGTTGGACGGCCCTGG
CTCATCTTGCGTGGTCGCAGGGCTTTCGTACACCCAAAATTGCTGCGATA
CTCCAGCAGTGGGGGTTCCGACCAGTTCAATGTCAACGCCAGGGACACTT
CCAAGAGCCCCACTTAACCCGAAATGGGACAGGCCCCTGGAAGCTGCGCC
ATCGGTCCGGCATGCCCTCTGAAATGGCTTTTTTGCAAAGTCAGCCGTTC
CTGACGCTGCACAATATAGACACCCACCGGGATTGTGTTGCAGGAGAGGA
CCTAACTCCATATGCGGTCGCTCGGGACATCTTTCAGGCGTTCCTTGGCA
ACCTTCCAACCTTATCCGAACCGGTCGCAAATGCGTCCCTGCACACGTAC
AAGGCCCGAAACAAGGAGCATAGATTCCTTCCATCTCAGCCTGTTGCCAC
CTTTCATAGCCCAGATCACAGTGTGCATCTCTTATCCCCCTCCATGTGTC
ACGAGCCAAGGAGGGTCCTCGCCACCAATGGCAGTCACCTGGAAACGGAT
AGGCGGAGGACTAGTGCCGAGCCGCTGCTGCACGATGTATGGCAGAATGG
TAACACACCCGGGCAACGAATCGATTACAGCCCGTCTAGCTATGGTTCCC
CAGCCGCCTCATCACATGGTGAGCCACCCAGGAGGCCGCTCTTTGATTCG
GCGGAGCTGGTACGGATAGGCGACAGTAATCCCTTCAGTTCATCCAGCAC
ACGAATAAATTCTCCCCACCCCCAACATACACCAGTACACAAATGTCCTC
CAATCGCGGTGGCACCGGTTGCTGGCCCGTCGCACTCTCGGCTCGGGCTT
CTAGGGTGGAAGACTCGGAAGAGGCCGCAAGACCTGTCATCGCCAGGATC
ATCAGGAGCAGAGGGTAAAGGCATTCTGTACGAGATGGGAACACCGGCAA
CTGTGTACTATTTGCCTTTGCCCCGCGCGCGTCGCCTTTTTAAGCAATAC
CTTGACAGCCATCCTCACTTCGTCTATGCAAGACTGACCTCTAAAGGGCA
CCGCCTAGTTGATCCGGCAGCCGTTCCTGGCCACCTGAGACATGCTGTGG
TGGTTGCCGGTCCCAAGCAATTAATGTCCCTATGTGATGAAGATAATGCG
CTGATAGAAGACAAGGACGAGCACTGTGCACAAGATGCGCAAGCCTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001423-T1.utr3p1 | KJC3_001423-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR022198 |
| DBxref | PFAM:PF12520 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:3681713..3683868 + |
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