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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:3720477..3722126- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001430-T2 ID=KJC3_001430-T2|Name=KJC3_001430-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1650bp|location=Sequence derived from alignment at ch1:3720477..3722126- (Aspergillus niger KJC3)
ATGAAGTGGACATGGACCAACAGGGGTATGAATATATTAATAGTGGGGGA
ATAAATGAAAAGGCTCTTATACATTCTTTATCTGTTGAAGAGAATGCACT
TGGGCACCCCGGCAGTTCAGATTCAGCGGAGCACTTGAGTTCTGCCGATC
ATCAACAGGAGTGGCAGCAAGCTATGGAGCATGGCTTCAACGTATGTGTC
AGCATAGGCCGGAGTTTTCATAACTTCTAACCCAATCATACAGCTAGATA
TTGTTCTTCTTAGACACTTTGGTACGGCTCAAGGGTTGGTCCGGCAAGGA
CCAATCATTCACAACCTAGCCCCAAATTCCACGGGTACTAGACTCCGGAG
GGCACATCCCTGCGTCCAGGGGATCTCCATCTGGAGGCCTATTAGAGGGG
GCCTCGGGGCAGAGAACGGTCTCTTCAAAGTCTATCCCGGATCCCAAGGG
ATCAGAACAGAAAATGAGCTGCGAGATAGTCAAATCAGCACACTTGAAAT
ACGAATCCGTGCTGATCAGGTCTTTATTGCACATGGCGGGCTCTGGATAG
AGGAAGGTAACGGGAACGGCATCCTGATGTGGATGGGAGTGTCGGCGGAT
ATCATTGGTCTATACATTGACAAATACTGCCTACCTTTCGTTGCAGGAGC
GTACAATGCCTCGAGATTCCTTTCGCGAACAGTGCCACCCGGGCTGGTCA
AAGCAGAGACTCAGGCAACTCTAGCCGACTCCTTTTTCCCGCAAGAGAGG
CTAGTAAGGGCAGGCAACCATCGCTCGAACACTGCGGACGTGTTCCTCCG
TAGTGCGATACCTTACACCTCCCGGATTCTGGAGTATTTTACGAACCTGG
ATCCGACCGGTATAATCCTGGCAGCTTGTCCCGCTGGTGAAGATCCGAGG
ATGGCATTTCTCACCGTGGACCGGGGTACTGACATAAGGAAATGGTTTCT
TCGCGCTCTTGCTGTACGATGTCTCATTCGGCGCCATCATTCGAGAGGTG
GTACAATAGAGGATTTTATCCGGGCGGACGGACTACCCAAAACATCACGG
TTAATCAACACTATTAGGCACGGTAAAAAGCTGTATTGGATAGAGTTATC
ATTGAGAAAGTCGGGTATCTGGATTGCCCTCCTGAATGTAATGTCTCGGC
TTGATCATATCACCTGGGAAGAGGTATTCTCCATACCGGACTCGATACAC
CGGTACCCAACACTTTTGGAAATCCCGGAAGAATGGTCTCCACTTATGGA
GGGTTGCACTCAGTTGTTGGGCTCACTCGCGCCTCCGGGCGCCTCTGATG
GATGCGTCACCCCCGGTCAGAGTTTTGATTAATTAGTTAGGTCAATCAAT
AAGAGGGACTGGTGTCGCAGGCAGACCCGCACTTGTCGCTGAGTGGGGCT
CATCGAAAATGAGCCTACAGGCCAGGGCGGCCACCCCTTGCTCGACCCGA
TTCACACAATCAATGACACATTACCAGTCACAGACTTAAGAGAGGTGGCC
TAGAGCAGGACATATGCTGGATCGCTTAGAAACCACCCGAGAACACAACC
AATAGAAGGTGATCAGCTGCTTGGTATTGCGCAATTCCTTGGGAGACTGA
CAAGCCCCCGTCCACCTCCCATTATCCGTGTCCGGAATAGTTCAGTGTGG
back to topCoding sequence (CDS) from alignment at ch1:3720477..3722126- >KJC3_001430-T2 ID=KJC3_001430-T2|Name=KJC3_001430-T2|organism=Aspergillus niger KJC3|type=CDS|length=2160bp|location=Sequence derived from alignment at ch1:3720477..3722126- (Aspergillus niger KJC3)
ACACTTTGGTACGGCTCAAGGGTTGGTCCGGCAAGGACCAATCATTCACA
ACCTAGCCCCAAATTCCACGGGTACTAGACTCCGGAGGGCACATCCCTGC
GTCCAGGGGATCTCCATCTGGAGGCCTATTAGAGGGGGCCTCGGGGCAGA
GAACGGTCTCTTCAAAGTCTATCCCGGATCCCAAGGGATCAGAACAGAAA
ATGAGCTGCGAGATAGTCAAATCAGCACACTTGAAATACGAATCCGTGCT
GATCAGGTCTTTATTGCACATGGCGGGCTCTGGATAGAGGAAGGTAACGG
GAACGGCATCCTGATGTGGATGGGAGTGTCGGCGGATATCATTGGTCTAT
ACATTGACAAATACTGCCTACCTTTCGTTGCAGGAGCGTACAATGCCTCG
AGATTCCTTTCGCGAACAGTGCCACCCGGGCTGGTCAAAGCAGAGACTCA
GGCAACTCTAGCCGACTCCTTTTTCCCGCAAGAGAGGCTAGTAAGGGCAG
GCAACCATCGCTCGAACACTGCGGACGTGTTCCTCCGTAGTGCGATACCT
TACACCTCCCGGATTCTGGAGTATTTTACGAACCTGGATCCGACCGGTAT
AATCCTGGCAGCTTGTCCCGCTGGTGAAGATCCGAGGATGGCATTTCTCA
CCGTGGACCGGGGTACTGACATAAGGAAATGGTTTCTTCGCGCTCTTGCT
GTACGATGTCTCATTCGGCGCCATCATTCGAGAGGTGGTACAATAGAGGA
TTTTATCCGGGCGGACGGACTACCCAAAACATCACGGTTAATCAACACTA
TTAGGCACGGTAAAAAGCTGTATTGGATAGAGTTATCATTGAGAAAGTCG
GGTATCTGGATTGCCCTCCTGAATGTAATGTCTCGGCTTGATCATATCAC
CTGGGAAGAGGTATTCTCCATACCGGACTCGATACACCGGTACCCAACAC
TTTTGGAAATCCCGGAAGAATGGTCTCCACTTATGGAGGGTTGCACTCAG
TTGTTGGGCTCACTCGCGCCTCCGGGCGCCTCTGATGGATGCGTCACCCC
CGGTCAGAGTTTTGATTAAATGGCTTCAACACACTTTGGTACGGCTCAAG
GGTTGGTCCGGCAAGGACCAATCATTCACAACCTAGCCCCAAATTCCACG
GGTACTAGACTCCGGAGGGCACATCCCTGCGTCCAGGGGATCTCCATCTG
GAGGCCTATTAGAGGGGGCCTCGGGGCAGAGAACGGTCTCTTCAAAGTCT
ATCCCGGATCCCAAGGGATCAGAACAGAAAATGAGCTGCGAGATAGTCAA
ATCAGCACACTTGAAATACGAATCCGTGCTGATCAGGTCTTTATTGCACA
TGGCGGGCTCTGGATAGAGGAAGGTAACGGGAACGGCATCCTGATGTGGA
TGGGAGTGTCGGCGGATATCATTGGTCTATACATTGACAAATACTGCCTA
CCTTTCGTTGCAGGAGCGTACAATGCCTCGAGATTCCTTTCGCGAACAGT
GCCACCCGGGCTGGTCAAAGCAGAGACTCAGGCAACTCTAGCCGACTCCT
TTTTCCCGCAAGAGAGGCTAGTAAGGGCAGGCAACCATCGCTCGAACACT
GCGGACGTGTTCCTCCGTAGTGCGATACCTTACACCTCCCGGATTCTGGA
GTATTTTACGAACCTGGATCCGACCGGTATAATCCTGGCAGCTTGTCCCG
CTGGTGAAGATCCGAGGATGGCATTTCTCACCGTGGACCGGGGTACTGAC
ATAAGGAAATGGTTTCTTCGCGCTCTTGCTGTACGATGTCTCATTCGGCG
CCATCATTCGAGAGGTGGTACAATAGAGGATTTTATCCGGGCGGACGGAC
TACCCAAAACATCACGGTTAATCAACACTATTAGGCACGGTAAAAAGCTG
TATTGGATAGAGTTATCATTGAGAAAGTCGGGTATCTGGATTGCCCTCCT
GAATGTAATGTCTCGGCTTGATCATATCACCTGGGAAGAGGTATTCTCCA
TACCGGACTCGATACACCGGTACCCAACACTTTTGGAAATCCCGGAAGAA
TGGTCTCCACTTATGGAGGGTTGCACTCAGTTGTTGGGCTCACTCGCGCC
TCCGGGCGCCTCTGATGGATGCGTCACCCCCGGTCAGAGTTTTGATTAAA
TGGCTTCAAC back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001430-T2.utr3p1 | KJC3_001430-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001430-T2.utr5p1 | KJC3_001430-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:3720477..3722126 - |
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