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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:3819065..3821239+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001459-T1 ID=KJC3_001459-T1|Name=KJC3_001459-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2175bp|location=Sequence derived from alignment at ch1:3819065..3821239+ (Aspergillus niger KJC3) AGACAATATGAAGCTGCCAACCAGATGGACAGCACACTTCAAATTCTATA
TTCATCCCCAAGAAATCTATCATCCACATACACTACGCTCTACCTCAAAA
TTACCTTTCAGCCCCTTTCCCTGTCTTTTCAACGGGTATTGCCGACATCT
CCGTGTCATGAGCTCTGCAAGCATGCCACACCGCGACACGGATCTCTTCC
AATACACCAGTGGTCGTTGGCTATGGGACGAGGAGCAGCAACTTCGAGAA
AGATTTTCTCCTTTCAATGTGCCTGAGCTGCAGAGAATTGCAGCGCAAAG
TGTTGGAGCAGACACGTGTACTGCAATTACAAAATTGGCCGAAGGATCAT
TCAACAAGACTTTCAGACTTCAAATGGATAATGGATCATCTGTGATTGCA
AGAATACCTCATCCTATTGCCGGGCCTAGACACTATACTACGGCGTCTGA
GGTTGCAACGATGGAATTTGTAAGGATTGAACATGATGTATCAGGTATAA
TATCACTGACAGATCCAGGCCCGTACAATCCTCGGAGTACCAACACCTCG
AGTATATGCTTGGAATGCCGATGTGAATAATGCTGTCGGTTCTGAGTATA
TCATAATGGAAGAAGCCGCCGGTACCAAACTGGACGACATATGGGACGTT
ATCTCTCTTGAAGAGAAGATAGAGATCATGAAGGATCTTGTCCAACTAGA
GAAGAAAATGCTCCAGGTGCCACTAAATAAGTAATATCTTCGAAGCCAAC
TTGGTCTATTATATTGCTAATGATGACTAGTTATGGAAGTTTATACTTTG
CGAACACTAATATCAGGGGTGCTACGCCAGTTGACATATGTGCAGATGTA
TCCCCTGAGCTCAAGGACAAGATAAATCGCCGATTTGTCATTGGCCCAGT
CGCAGAAAGACATTATTGGTTAAAGGAACGTGCAGAGATGGCTTTGGATC
GTGGACCGTGTTTGTTATCTACCCATCTCCTTGTTGTCTTGACTGACCAA
TTGAAGGGAAACAACCGCAGGATTACGTGCTCTCTCTGGCCCATCGAGAA
GAGGCATGGATCCAGAAATATGCAACCCCAAGACCCAAAGACGACCCGCT
AGTGACCTCAGCCTCGCAGAACTCTCCAAACAGCCATATTGATTTACTAC
ACAAGTATCTTAAAGTGGCACCTTATCTTCTCCCAAACGCTCCTGCGGTA
GTTGCACCATACATTTGGCATACAGATCTACATGCTGGAAACATCTTCGT
CCAAAAGGGAAAAATTTCCAGTGTTATAGACTGGCAGGGTCTGTGGGCAG
CACCATTGATACTTCAAGCACGCCATGCACGACTAGTTGATTATAATGGG
GAAGTTATTTTGAAAGCCCCGGCAAACTTTAAAGATCTTGAACCAGCAGA
AAAGACTCGAATTAGAGGCCTTATGAGTAGCTCGATACTACTTTACCTCT
ACGAAAAGCAGATTGCTCAAGACATACCCCTCCTTGATAGAGTCCTTCGG
TTTGACCACGGCAGGATACGGTGCGAGCCAATCTTATTTGTGGGTGACAC
GTGGGATGATGAAATCATACCCTTGCGAGAATCATTGATAAGGGTTGAGA
GGTAAGTACTTCTCTGTCTGTCTTGTATACCATATTACTAACAATGCTTC
AGGAGCTGGAACGAGTTAGGATTTGATTTTCCATGCCCTATCAATTTTAC
AGAGGATGATCTTCGTATTCATGCAGAAGAAAGTGACGGGTGGAACGACG
TTCAGGAATTTTGGGACTCTGTTGCGCATATAGTATCGAGAGATGGTTGG
ACACCACATCATCTATATGATGATGCCATTTCTCTTTTTACGGAGCTACG
AGATATTGGCCTGAAAGCTATGGTAGGCAAGGAGAGAGACGCATTCGAAA
AACAGACGCAGTGGGTCAAGAAGCATTAATTCGACCGCTTTCTTCCCAAC
TGTTTTTTTAACGATAATCCGTCGGGCTGGTGTTACACTGAGCTCCAACC
GCTCACGTGGTTGCAGATGGGATAGACAGTAATTTTAACTCTGTCGACTG
TAAACTGCTTATTAAGCACTTATTTGTCATGTGCCATCATCCCACCTCTT
TCAATACGACGTATCTTTGAGCCGGACATAGGACCTCGAACCCACTTAGA
TGGCTGGCCATCCAATATTTGCGGC back to topCoding sequence (CDS) from alignment at ch1:3819065..3821239+ >KJC3_001459-T1 ID=KJC3_001459-T1|Name=KJC3_001459-T1|organism=Aspergillus niger KJC3|type=CDS|length=8625bp|location=Sequence derived from alignment at ch1:3819065..3821239+ (Aspergillus niger KJC3) ATGAAGCTGCCAACCAGATGGACAGCACACTTCAAATTCTATATTCATCC CCAAGAAATCTATCATCCACATACACTACGCTCTACCTCAAAATTACCTT TCAGCCCCTTTCCCTGTCTTTTCAACGGGTATTGCCGACATCTCCGTGTC ATGAGCTCTGCAAGCATGCCACACCGCGACACGGATCTCTTCCAATACAC CAGTGGTCGTTGGCTATGGGACGAGGAGCAGCAACTTCGAGAAAGATTTT CTCCTTTCAATGTGCCTGAGCTGCAGAGAATTGCAGCGCAAAGTGTTGGA GCAGACACGTGTACTGCAATTACAAAATTGGCCGAAGGATCATTCAACAA GACTTTCAGACTTCAAATGGATAATGGATCATCTGTGATTGCAAGAATAC CTCATCCTATTGCCGGGCCTAGACACTATACTACGGCGTCTGAGGTTGCA ACGATGGAATTTGCCCGTACAATCCTCGGAGTACCAACACCTCGAGTATA TGCTTGGAATGCCGATGTGAATAATGCTGTCGGTTCTGAGTATATCATAA TGGAAGAAGCCGCCGGTACCAAACTGGACGACATATGGGACGTTATCTCT CTTGAAGAGAAGATAGAGATCATGAAGGATCTTGTCCAACTAGAGAAGAA AATGCTCCAGGTGCCACTAAATAATTATGGAAGTTTATACTTTGCGAACA CTAATATCAGGGGTGCTACGCCAGTTGACATATGTGCAGATGTATCCCCT GAGCTCAAGGACAAGATAAATCGCCGATTTGTCATTGGCCCAGTCGCAGA AAGACATTATTGGTTAAAGGAACGTGCAGAGATGGCTTTGGATCGTGGAC CGTGGAAACAACCGCAGGATTACGTGCTCTCTCTGGCCCATCGAGAAGAG GCATGGATCCAGAAATATGCAACCCCAAGACCCAAAGACGACCCGCTAGT GACCTCAGCCTCGCAGAACTCTCCAAACAGCCATATTGATTTACTACACA AGTATCTTAAAGTGGCACCTTATCTTCTCCCAAACGCTCCTGCGGTAGTT GCACCATACATTTGGCATACAGATCTACATGCTGGAAACATCTTCGTCCA AAAGGGAAAAATTTCCAGTGTTATAGACTGGCAGGGTCTGTGGGCAGCAC CATTGATACTTCAAGCACGCCATGCACGACTAGTTGATTATAATGGGGAA GTTATTTTGAAAGCCCCGGCAAACTTTAAAGATCTTGAACCAGCAGAAAA GACTCGAATTAGAGGCCTTATGAGTAGCTCGATACTACTTTACCTCTACG AAAAGCAGATTGCTCAAGACATACCCCTCCTTGATAGAGTCCTTCGGTTT GACCACGGCAGGATACGGTGCGAGCCAATCTTATTTGTGGGTGACACGTG GGATGATGAAATCATACCCTTGCGAGAATCATTGATAAGGGTTGAGAGGA GCTGGAACGAGTTAGGATTTGATTTTCCATGCCCTATCAATTTTACAGAG GATGATCTTCGTATTCATGCAGAAGAAAGTGACGGGTGGAACGACGTTCA GGAATTTTGGGACTCTGTTGCGCATATAGTATCGAGAGATGGTTGGACAC CACATCATCTATATGATGATGCCATTTCTCTTTTTACGGAGCTACGAGAT ATTGGCCTGAAAGCTATGGTAGGCAAGGAGAGAGACGCATTCGAAAAACA GACGCAGTGGGTCAAGAAGCATTAAATGAAGCTGCCAACCAGATGGACAG CACACTTCAAATTCTATATTCATCCCCAAGAAATCTATCATCCACATACA CTACGCTCTACCTCAAAATTACCTTTCAGCCCCTTTCCCTGTCTTTTCAA CGGGTATTGCCGACATCTCCGTGTCATGAGCTCTGCAAGCATGCCACACC GCGACACGGATCTCTTCCAATACACCAGTGGTCGTTGGCTATGGGACGAG GAGCAGCAACTTCGAGAAAGATTTTCTCCTTTCAATGTGCCTGAGCTGCA GAGAATTGCAGCGCAAAGTGTTGGAGCAGACACGTGTACTGCAATTACAA AATTGGCCGAAGGATCATTCAACAAGACTTTCAGACTTCAAATGGATAAT GGATCATCTGTGATTGCAAGAATACCTCATCCTATTGCCGGGCCTAGACA CTATACTACGGCGTCTGAGGTTGCAACGATGGAATTTGCCCGTACAATCC TCGGAGTACCAACACCTCGAGTATATGCTTGGAATGCCGATGTGAATAAT GCTGTCGGTTCTGAGTATATCATAATGGAAGAAGCCGCCGGTACCAAACT GGACGACATATGGGACGTTATCTCTCTTGAAGAGAAGATAGAGATCATGA AGGATCTTGTCCAACTAGAGAAGAAAATGCTCCAGGTGCCACTAAATAAT TATGGAAGTTTATACTTTGCGAACACTAATATCAGGGGTGCTACGCCAGT TGACATATGTGCAGATGTATCCCCTGAGCTCAAGGACAAGATAAATCGCC GATTTGTCATTGGCCCAGTCGCAGAAAGACATTATTGGTTAAAGGAACGT GCAGAGATGGCTTTGGATCGTGGACCGTGGAAACAACCGCAGGATTACGT GCTCTCTCTGGCCCATCGAGAAGAGGCATGGATCCAGAAATATGCAACCC CAAGACCCAAAGACGACCCGCTAGTGACCTCAGCCTCGCAGAACTCTCCA AACAGCCATATTGATTTACTACACAAGTATCTTAAAGTGGCACCTTATCT TCTCCCAAACGCTCCTGCGGTAGTTGCACCATACATTTGGCATACAGATC TACATGCTGGAAACATCTTCGTCCAAAAGGGAAAAATTTCCAGTGTTATA GACTGGCAGGGTCTGTGGGCAGCACCATTGATACTTCAAGCACGCCATGC ACGACTAGTTGATTATAATGGGGAAGTTATTTTGAAAGCCCCGGCAAACT TTAAAGATCTTGAACCAGCAGAAAAGACTCGAATTAGAGGCCTTATGAGT AGCTCGATACTACTTTACCTCTACGAAAAGCAGATTGCTCAAGACATACC CCTCCTTGATAGAGTCCTTCGGTTTGACCACGGCAGGATACGGTGCGAGC CAATCTTATTTGTGGGTGACACGTGGGATGATGAAATCATACCCTTGCGA GAATCATTGATAAGGGTTGAGAGGAGCTGGAACGAGTTAGGATTTGATTT TCCATGCCCTATCAATTTTACAGAGGATGATCTTCGTATTCATGCAGAAG AAAGTGACGGGTGGAACGACGTTCAGGAATTTTGGGACTCTGTTGCGCAT ATAGTATCGAGAGATGGTTGGACACCACATCATCTATATGATGATGCCAT TTCTCTTTTTACGGAGCTACGAGATATTGGCCTGAAAGCTATGGTAGGCA AGGAGAGAGACGCATTCGAAAAACAGACGCAGTGGGTCAAGAAGCATTAA ATGAAGCTGCCAACCAGATGGACAGCACACTTCAAATTCTATATTCATCC CCAAGAAATCTATCATCCACATACACTACGCTCTACCTCAAAATTACCTT TCAGCCCCTTTCCCTGTCTTTTCAACGGGTATTGCCGACATCTCCGTGTC ATGAGCTCTGCAAGCATGCCACACCGCGACACGGATCTCTTCCAATACAC CAGTGGTCGTTGGCTATGGGACGAGGAGCAGCAACTTCGAGAAAGATTTT CTCCTTTCAATGTGCCTGAGCTGCAGAGAATTGCAGCGCAAAGTGTTGGA GCAGACACGTGTACTGCAATTACAAAATTGGCCGAAGGATCATTCAACAA GACTTTCAGACTTCAAATGGATAATGGATCATCTGTGATTGCAAGAATAC CTCATCCTATTGCCGGGCCTAGACACTATACTACGGCGTCTGAGGTTGCA ACGATGGAATTTGCCCGTACAATCCTCGGAGTACCAACACCTCGAGTATA TGCTTGGAATGCCGATGTGAATAATGCTGTCGGTTCTGAGTATATCATAA TGGAAGAAGCCGCCGGTACCAAACTGGACGACATATGGGACGTTATCTCT CTTGAAGAGAAGATAGAGATCATGAAGGATCTTGTCCAACTAGAGAAGAA AATGCTCCAGGTGCCACTAAATAATTATGGAAGTTTATACTTTGCGAACA CTAATATCAGGGGTGCTACGCCAGTTGACATATGTGCAGATGTATCCCCT GAGCTCAAGGACAAGATAAATCGCCGATTTGTCATTGGCCCAGTCGCAGA AAGACATTATTGGTTAAAGGAACGTGCAGAGATGGCTTTGGATCGTGGAC CGTGGAAACAACCGCAGGATTACGTGCTCTCTCTGGCCCATCGAGAAGAG GCATGGATCCAGAAATATGCAACCCCAAGACCCAAAGACGACCCGCTAGT GACCTCAGCCTCGCAGAACTCTCCAAACAGCCATATTGATTTACTACACA AGTATCTTAAAGTGGCACCTTATCTTCTCCCAAACGCTCCTGCGGTAGTT GCACCATACATTTGGCATACAGATCTACATGCTGGAAACATCTTCGTCCA AAAGGGAAAAATTTCCAGTGTTATAGACTGGCAGGGTCTGTGGGCAGCAC CATTGATACTTCAAGCACGCCATGCACGACTAGTTGATTATAATGGGGAA GTTATTTTGAAAGCCCCGGCAAACTTTAAAGATCTTGAACCAGCAGAAAA GACTCGAATTAGAGGCCTTATGAGTAGCTCGATACTACTTTACCTCTACG AAAAGCAGATTGCTCAAGACATACCCCTCCTTGATAGAGTCCTTCGGTTT GACCACGGCAGGATACGGTGCGAGCCAATCTTATTTGTGGGTGACACGTG GGATGATGAAATCATACCCTTGCGAGAATCATTGATAAGGGTTGAGAGGA GCTGGAACGAGTTAGGATTTGATTTTCCATGCCCTATCAATTTTACAGAG GATGATCTTCGTATTCATGCAGAAGAAAGTGACGGGTGGAACGACGTTCA GGAATTTTGGGACTCTGTTGCGCATATAGTATCGAGAGATGGTTGGACAC CACATCATCTATATGATGATGCCATTTCTCTTTTTACGGAGCTACGAGAT ATTGGCCTGAAAGCTATGGTAGGCAAGGAGAGAGACGCATTCGAAAAACA GACGCAGTGGGTCAAGAAGCATTAAATGAAGCTGCCAACCAGATGGACAG CACACTTCAAATTCTATATTCATCCCCAAGAAATCTATCATCCACATACA CTACGCTCTACCTCAAAATTACCTTTCAGCCCCTTTCCCTGTCTTTTCAA CGGGTATTGCCGACATCTCCGTGTCATGAGCTCTGCAAGCATGCCACACC GCGACACGGATCTCTTCCAATACACCAGTGGTCGTTGGCTATGGGACGAG GAGCAGCAACTTCGAGAAAGATTTTCTCCTTTCAATGTGCCTGAGCTGCA GAGAATTGCAGCGCAAAGTGTTGGAGCAGACACGTGTACTGCAATTACAA AATTGGCCGAAGGATCATTCAACAAGACTTTCAGACTTCAAATGGATAAT GGATCATCTGTGATTGCAAGAATACCTCATCCTATTGCCGGGCCTAGACA CTATACTACGGCGTCTGAGGTTGCAACGATGGAATTTGCCCGTACAATCC TCGGAGTACCAACACCTCGAGTATATGCTTGGAATGCCGATGTGAATAAT GCTGTCGGTTCTGAGTATATCATAATGGAAGAAGCCGCCGGTACCAAACT GGACGACATATGGGACGTTATCTCTCTTGAAGAGAAGATAGAGATCATGA AGGATCTTGTCCAACTAGAGAAGAAAATGCTCCAGGTGCCACTAAATAAT TATGGAAGTTTATACTTTGCGAACACTAATATCAGGGGTGCTACGCCAGT TGACATATGTGCAGATGTATCCCCTGAGCTCAAGGACAAGATAAATCGCC GATTTGTCATTGGCCCAGTCGCAGAAAGACATTATTGGTTAAAGGAACGT GCAGAGATGGCTTTGGATCGTGGACCGTGGAAACAACCGCAGGATTACGT GCTCTCTCTGGCCCATCGAGAAGAGGCATGGATCCAGAAATATGCAACCC CAAGACCCAAAGACGACCCGCTAGTGACCTCAGCCTCGCAGAACTCTCCA AACAGCCATATTGATTTACTACACAAGTATCTTAAAGTGGCACCTTATCT TCTCCCAAACGCTCCTGCGGTAGTTGCACCATACATTTGGCATACAGATC TACATGCTGGAAACATCTTCGTCCAAAAGGGAAAAATTTCCAGTGTTATA GACTGGCAGGGTCTGTGGGCAGCACCATTGATACTTCAAGCACGCCATGC ACGACTAGTTGATTATAATGGGGAAGTTATTTTGAAAGCCCCGGCAAACT TTAAAGATCTTGAACCAGCAGAAAAGACTCGAATTAGAGGCCTTATGAGT AGCTCGATACTACTTTACCTCTACGAAAAGCAGATTGCTCAAGACATACC CCTCCTTGATAGAGTCCTTCGGTTTGACCACGGCAGGATACGGTGCGAGC CAATCTTATTTGTGGGTGACACGTGGGATGATGAAATCATACCCTTGCGA GAATCATTGATAAGGGTTGAGAGGAGCTGGAACGAGTTAGGATTTGATTT TCCATGCCCTATCAATTTTACAGAGGATGATCTTCGTATTCATGCAGAAG AAAGTGACGGGTGGAACGACGTTCAGGAATTTTGGGACTCTGTTGCGCAT ATAGTATCGAGAGATGGTTGGACACCACATCATCTATATGATGATGCCAT TTCTCTTTTTACGGAGCTACGAGATATTGGCCTGAAAGCTATGGTAGGCA AGGAGAGAGACGCATTCGAAAAACAGACGCAGTGGGTCAAGAAGCATTAA ATGAAGCTGCCAACCAGATGGACAGCACACTTCAAATTCTATATTCATCC CCAAGAAATCTATCATCCACATACACTACGCTCTACCTCAAAATTACCTT TCAGCCCCTTTCCCTGTCTTTTCAACGGGTATTGCCGACATCTCCGTGTC ATGAGCTCTGCAAGCATGCCACACCGCGACACGGATCTCTTCCAATACAC CAGTGGTCGTTGGCTATGGGACGAGGAGCAGCAACTTCGAGAAAGATTTT CTCCTTTCAATGTGCCTGAGCTGCAGAGAATTGCAGCGCAAAGTGTTGGA GCAGACACGTGTACTGCAATTACAAAATTGGCCGAAGGATCATTCAACAA GACTTTCAGACTTCAAATGGATAATGGATCATCTGTGATTGCAAGAATAC CTCATCCTATTGCCGGGCCTAGACACTATACTACGGCGTCTGAGGTTGCA ACGATGGAATTTGCCCGTACAATCCTCGGAGTACCAACACCTCGAGTATA TGCTTGGAATGCCGATGTGAATAATGCTGTCGGTTCTGAGTATATCATAA TGGAAGAAGCCGCCGGTACCAAACTGGACGACATATGGGACGTTATCTCT CTTGAAGAGAAGATAGAGATCATGAAGGATCTTGTCCAACTAGAGAAGAA AATGCTCCAGGTGCCACTAAATAATTATGGAAGTTTATACTTTGCGAACA CTAATATCAGGGGTGCTACGCCAGTTGACATATGTGCAGATGTATCCCCT GAGCTCAAGGACAAGATAAATCGCCGATTTGTCATTGGCCCAGTCGCAGA AAGACATTATTGGTTAAAGGAACGTGCAGAGATGGCTTTGGATCGTGGAC CGTGGAAACAACCGCAGGATTACGTGCTCTCTCTGGCCCATCGAGAAGAG GCATGGATCCAGAAATATGCAACCCCAAGACCCAAAGACGACCCGCTAGT GACCTCAGCCTCGCAGAACTCTCCAAACAGCCATATTGATTTACTACACA AGTATCTTAAAGTGGCACCTTATCTTCTCCCAAACGCTCCTGCGGTAGTT GCACCATACATTTGGCATACAGATCTACATGCTGGAAACATCTTCGTCCA AAAGGGAAAAATTTCCAGTGTTATAGACTGGCAGGGTCTGTGGGCAGCAC CATTGATACTTCAAGCACGCCATGCACGACTAGTTGATTATAATGGGGAA GTTATTTTGAAAGCCCCGGCAAACTTTAAAGATCTTGAACCAGCAGAAAA GACTCGAATTAGAGGCCTTATGAGTAGCTCGATACTACTTTACCTCTACG AAAAGCAGATTGCTCAAGACATACCCCTCCTTGATAGAGTCCTTCGGTTT GACCACGGCAGGATACGGTGCGAGCCAATCTTATTTGTGGGTGACACGTG GGATGATGAAATCATACCCTTGCGAGAATCATTGATAAGGGTTGAGAGGA GCTGGAACGAGTTAGGATTTGATTTTCCATGCCCTATCAATTTTACAGAG GATGATCTTCGTATTCATGCAGAAGAAAGTGACGGGTGGAACGACGTTCA GGAATTTTGGGACTCTGTTGCGCATATAGTATCGAGAGATGGTTGGACAC CACATCATCTATATGATGATGCCATTTCTCTTTTTACGGAGCTACGAGAT ATTGGCCTGAAAGCTATGGTAGGCAAGGAGAGAGACGCATTCGAAAAACA GACGCAGTGGGTCAAGAAGCATTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
| KJC3_001459-T1.utr5p1 | KJC3_001459-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
| KJC3_001459-T1.utr3p1 | KJC3_001459-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
| DBxref | InterPro:IPR011009 |
| DBxref | InterPro:IPR002575 |
| DBxref | PFAM:PF01636 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| ch1 | supercontig | ch1:3819065..3821239 + |
|