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KJC3_001461-T1, KJC3_001461-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001461-T1
Unique NameKJC3_001461-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:3827978..3830289+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001461-T1 ID=KJC3_001461-T1|Name=KJC3_001461-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2312bp|location=Sequence derived from alignment at ch1:3827978..3830289+ (Aspergillus niger KJC3)
ATGGCACCGTCTACAGCTACGCCGACCGATTTGCACCGAGCATCCGTGTA
AGGAATCTCCTGGGCCCCTCACCCCACAATTAGGCTGTATCGCGGACTAA
CAGTAGCAGTGCCTGTCTCCAGTGCCGAAAGGCAAAGGTCCGGTGCCTTG
TCACCCAGCGACTGGATCAGTGTAACCGATGTTTAGCAAACAATACAGGC
TGTGTTTTTACTCAGGCAAAAAGAACCAGGGCAAGGCCGCAGCCCTACCC
TCAACCGCCATTGCCACCTGACGTTGAGGAAACGACGAATGATCGAGACG
TAGACGACCAAAATGATGGAACTCGAGTATTGGAAACGACTCACTCTGCT
ACCGTCACAATCAACCAGTCGGGCCTGGGCCCAGCGAAAGCGCCCACCCA
GGTTCCGCCGGCCGACAATGATCACGGCCTACCCGAGAAACCAGGACCCA
TAATCACTGATGCGATCCGCTCAAGACTCATTGCCACTTTATCGTCATTA
AGAAATTATAGGGGTGCTCCATTTAGTTTCATTACCGCTGAGGGGAGCCC
AGTGCAGCACCAGCGCAGTGAATCGCCCCGGACACCGCATTCATTGACTC
TCTCATCGCTGCTACGCCCTCTTAATTCAATAAATGACACCATACCCACA
AATAATAATGCGAACCAGTCGCCTACAAGCTCGATCAAAATGCCCAGTTA
CGTAGTATCCATGACTCTAGGCCACGCCATTAGCGACCCGATTGACGGGG
GTATACTCACCCTTCAAGCTTCAAAAGGGTTCTATGAGTATTTTCTGGTC
CACATGAATGCAAAATGGGAGTATATCCTGGATCCAAGAGATGATACCCA
TGACGATGTCCGACGGCACAGTCCGCTACTATTCGCGACGGTGCTCTTCT
GCTCATCCAAGTTTGCCGGCTTCGTTGAAGGTCGTATCGTCTCCGATACA
GACCCTTTCTTGCAGACTCGTCTATGCAGCCTAGCGAGAAATCTTGTCAT
TAAGACGCTTGCCGAGGGAAATAGGTCCATAGAGACAATGCAAGCTCTCT
ATTTGCTGGCCTGCTGGAAGGACGGGGATGATGACGTCTCATACCTACAC
AGCGGGTACGCGTTTCGCGTCCTCCAGGATATGGACTTACGAGGTAATGA
TGCAGGTAGTAGAGAGATGGCGAGGCGGAGACGAATATGGTTAGCTCTTT
ACCGGCAGGACAAACAGCAGAGTTTGTTCTTCATGCGTCGCTCGTCTTTC
CATCAAGGGGACGAAGCTTTCTTCCTGAGCGATAACGCCGACGTTGACAC
GTTGCTCATAGACACAATATCGCGCTGTAGTGCGGATCTACGGCGGATCC
AGAGCAAGCTTCGGGGATTAGTCGAGAACACATCCTCGTTAATGCTACCC
TGCCTTGAAGATCTGGTGGAAGAGGAGATCAGTACGTGGCGATCGAAGTG
GAATCATCTTGTGAATTGGGATAGGGTAGGAGGATCACGAGATATTCCGT
CTGTCGACCATGCCATGTTGTTTCCAGAACGTCACCATCTCCAAACAACT
ATGCAGCTGTTGGAGCAGAGTGTGAGACTCAACGTGGCTTCCGCTATGCT
CCGCCAATCTCTCGTGGTTTCTCTATCGCCTTCTAGCCGCCCTGTTCCTT
GCCATCAAGTGCCTCACCTGGATATTGATCTGTCAGCGCTGCGGCGAGAT
CGTTGCTACAATCTAGCAGGACTAAGGAGTGGTATTGAGGGCGCATTTGG
CACTCTTCGTGCACTGCTATGCATTCCCCAGGACGATCTGAGACGAGCTC
CGGATGCGATTCTTCTACTTGCACCGAGCGCAGCTCTTTTCCTTTGTCTA
CTTCTGTGCCTGCCAGACAGCGGTATGCTTGGGCCCAGTTTCCAGAGGAA
AGCAGCCAGCTTTATTTGTCGTATAGCACAGTACATGGCAGGCTCTGTAA
GGTCACACAACGATAGCATGGTTCTGCATTCTGCGTACCTAGAATCTGTG
GTCAACCTTCTGGGCGTTCCTGCACCTGAGAATGGGCATCCCTCGGTCTA
TGTTGAGGAGTTGAATGCACAGCACATGCACGCGGGTCAAAATGATCTAG
ATATCGAGTACACCACCAATCAACCGACCCAAGGCCTGGCAGATAATATT
GGTGCAGGTGACGCAAACGCAGGATACAACGATGATGGAATCAACGGTTT
GTTTGGGGACGCAGAGCAAAATATACCTAGGCAGAGTCTGGTGAACCTTT
TAGAGGGAGATTTGTTCTGGGATATTCCTGCTACAACAAGCAATGTGTCT
CTTAACCACTGA
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Coding sequence (CDS) from alignment at ch1:3827978..3830289+

>KJC3_001461-T1 ID=KJC3_001461-T1|Name=KJC3_001461-T1|organism=Aspergillus niger KJC3|type=CDS|length=4500bp|location=Sequence derived from alignment at ch1:3827978..3830289+ (Aspergillus niger KJC3)
ATGGCACCGTCTACAGCTACGCCGACCGATTTGCACCGAGCATCCGTTGC
CTGTCTCCAGTGCCGAAAGGCAAAGGTCCGGTGCCTTGTCACCCAGCGAC
TGGATCAGTGTAACCGATGTTTAGCAAACAATACAGGCTGTGTTTTTACT
CAGGCAAAAAGAACCAGGGCAAGGCCGCAGCCCTACCCTCAACCGCCATT
GCCACCTGACGTTGAGGAAACGACGAATGATCGAGACGTAGACGACCAAA
ATGATGGAACTCGAGTATTGGAAACGACTCACTCTGCTACCGTCACAATC
AACCAGTCGGGCCTGGGCCCAGCGAAAGCGCCCACCCAGGTTCCGCCGGC
CGACAATGATCACGGCCTACCCGAGAAACCAGGACCCATAATCACTGATG
CGATCCGCTCAAGACTCATTGCCACTTTATCGTCATTAAGAAATTATAGG
GGTGCTCCATTTAGTTTCATTACCGCTGAGGGGAGCCCAGTGCAGCACCA
GCGCAGTGAATCGCCCCGGACACCGCATTCATTGACTCTCTCATCGCTGC
TACGCCCTCTTAATTCAATAAATGACACCATACCCACAAATAATAATGCG
AACCAGTCGCCTACAAGCTCGATCAAAATGCCCAGTTACGTAGTATCCAT
GACTCTAGGCCACGCCATTAGCGACCCGATTGACGGGGGTATACTCACCC
TTCAAGCTTCAAAAGGGTTCTATGAGTATTTTCTGGTCCACATGAATGCA
AAATGGGAGTATATCCTGGATCCAAGAGATGATACCCATGACGATGTCCG
ACGGCACAGTCCGCTACTATTCGCGACGGTGCTCTTCTGCTCATCCAAGT
TTGCCGGCTTCGTTGAAGGTCGTATCGTCTCCGATACAGACCCTTTCTTG
CAGACTCGTCTATGCAGCCTAGCGAGAAATCTTGTCATTAAGACGCTTGC
CGAGGGAAATAGGTCCATAGAGACAATGCAAGCTCTCTATTTGCTGGCCT
GCTGGAAGGACGGGGATGATGACGTCTCATACCTACACAGCGGGTACGCG
TTTCGCGTCCTCCAGGATATGGACTTACGAGGTAATGATGCAGGTAGTAG
AGAGATGGCGAGGCGGAGACGAATATGGTTAGCTCTTTACCGGCAGGACA
AACAGCAGAGTTTGTTCTTCATGCGTCGCTCGTCTTTCCATCAAGGGGAC
GAAGCTTTCTTCCTGAGCGATAACGCCGACGTTGACACGTTGCTCATAGA
CACAATATCGCGCTGTAGTGCGGATCTACGGCGGATCCAGAGCAAGCTTC
GGGGATTAGTCGAGAACACATCCTCGTTAATGCTACCCTGCCTTGAAGAT
CTGGTGGAAGAGGAGATCAGTACGTGGCGATCGAAGTGGAATCATCTTGT
GAATTGGGATAGGGTAGGAGGATCACGAGATATTCCGTCTGTCGACCATG
CCATGTTGTTTCCAGAACGTCACCATCTCCAAACAACTATGCAGCTGTTG
GAGCAGAGTGTGAGACTCAACGTGGCTTCCGCTATGCTCCGCCAATCTCT
CGTGGTTTCTCTATCGCCTTCTAGCCGCCCTGTTCCTTGCCATCAAGTGC
CTCACCTGGATATTGATCTGTCAGCGCTGCGGCGAGATCGTTGCTACAAT
CTAGCAGGACTAAGGAGTGGTATTGAGGGCGCATTTGGCACTCTTCGTGC
ACTGCTATGCATTCCCCAGGACGATCTGAGACGAGCTCCGGATGCGATTC
TTCTACTTGCACCGAGCGCAGCTCTTTTCCTTTGTCTACTTCTGTGCCTG
CCAGACAGCGGTATGCTTGGGCCCAGTTTCCAGAGGAAAGCAGCCAGCTT
TATTTGTCGTATAGCACAGTACATGGCAGGCTCTGTAAGGTCACACAACG
ATAGCATGGTTCTGCATTCTGCGTACCTAGAATCTGTGGTCAACCTTCTG
GGCGTTCCTGCACCTGAGAATGGGCATCCCTCGGTCTATGTTGAGGAGTT
GAATGCACAGCACATGCACGCGGGTCAAAATGATCTAGATATCGAGTACA
CCACCAATCAACCGACCCAAGGCCTGGCAGATAATATTGGTGCAGGTGAC
GCAAACGCAGGATACAACGATGATGGAATCAACGGTTTGTTTGGGGACGC
AGAGCAAAATATACCTAGGCAGAGTCTGGTGAACCTTTTAGAGGGAGATT
TGTTCTGGGATATTCCTGCTACAACAAGCAATGTGTCTCTTAACCACTGA
ATGGCACCGTCTACAGCTACGCCGACCGATTTGCACCGAGCATCCGTTGC
CTGTCTCCAGTGCCGAAAGGCAAAGGTCCGGTGCCTTGTCACCCAGCGAC
TGGATCAGTGTAACCGATGTTTAGCAAACAATACAGGCTGTGTTTTTACT
CAGGCAAAAAGAACCAGGGCAAGGCCGCAGCCCTACCCTCAACCGCCATT
GCCACCTGACGTTGAGGAAACGACGAATGATCGAGACGTAGACGACCAAA
ATGATGGAACTCGAGTATTGGAAACGACTCACTCTGCTACCGTCACAATC
AACCAGTCGGGCCTGGGCCCAGCGAAAGCGCCCACCCAGGTTCCGCCGGC
CGACAATGATCACGGCCTACCCGAGAAACCAGGACCCATAATCACTGATG
CGATCCGCTCAAGACTCATTGCCACTTTATCGTCATTAAGAAATTATAGG
GGTGCTCCATTTAGTTTCATTACCGCTGAGGGGAGCCCAGTGCAGCACCA
GCGCAGTGAATCGCCCCGGACACCGCATTCATTGACTCTCTCATCGCTGC
TACGCCCTCTTAATTCAATAAATGACACCATACCCACAAATAATAATGCG
AACCAGTCGCCTACAAGCTCGATCAAAATGCCCAGTTACGTAGTATCCAT
GACTCTAGGCCACGCCATTAGCGACCCGATTGACGGGGGTATACTCACCC
TTCAAGCTTCAAAAGGGTTCTATGAGTATTTTCTGGTCCACATGAATGCA
AAATGGGAGTATATCCTGGATCCAAGAGATGATACCCATGACGATGTCCG
ACGGCACAGTCCGCTACTATTCGCGACGGTGCTCTTCTGCTCATCCAAGT
TTGCCGGCTTCGTTGAAGGTCGTATCGTCTCCGATACAGACCCTTTCTTG
CAGACTCGTCTATGCAGCCTAGCGAGAAATCTTGTCATTAAGACGCTTGC
CGAGGGAAATAGGTCCATAGAGACAATGCAAGCTCTCTATTTGCTGGCCT
GCTGGAAGGACGGGGATGATGACGTCTCATACCTACACAGCGGGTACGCG
TTTCGCGTCCTCCAGGATATGGACTTACGAGGTAATGATGCAGGTAGTAG
AGAGATGGCGAGGCGGAGACGAATATGGTTAGCTCTTTACCGGCAGGACA
AACAGCAGAGTTTGTTCTTCATGCGTCGCTCGTCTTTCCATCAAGGGGAC
GAAGCTTTCTTCCTGAGCGATAACGCCGACGTTGACACGTTGCTCATAGA
CACAATATCGCGCTGTAGTGCGGATCTACGGCGGATCCAGAGCAAGCTTC
GGGGATTAGTCGAGAACACATCCTCGTTAATGCTACCCTGCCTTGAAGAT
CTGGTGGAAGAGGAGATCAGTACGTGGCGATCGAAGTGGAATCATCTTGT
GAATTGGGATAGGGTAGGAGGATCACGAGATATTCCGTCTGTCGACCATG
CCATGTTGTTTCCAGAACGTCACCATCTCCAAACAACTATGCAGCTGTTG
GAGCAGAGTGTGAGACTCAACGTGGCTTCCGCTATGCTCCGCCAATCTCT
CGTGGTTTCTCTATCGCCTTCTAGCCGCCCTGTTCCTTGCCATCAAGTGC
CTCACCTGGATATTGATCTGTCAGCGCTGCGGCGAGATCGTTGCTACAAT
CTAGCAGGACTAAGGAGTGGTATTGAGGGCGCATTTGGCACTCTTCGTGC
ACTGCTATGCATTCCCCAGGACGATCTGAGACGAGCTCCGGATGCGATTC
TTCTACTTGCACCGAGCGCAGCTCTTTTCCTTTGTCTACTTCTGTGCCTG
CCAGACAGCGGTATGCTTGGGCCCAGTTTCCAGAGGAAAGCAGCCAGCTT
TATTTGTCGTATAGCACAGTACATGGCAGGCTCTGTAAGGTCACACAACG
ATAGCATGGTTCTGCATTCTGCGTACCTAGAATCTGTGGTCAACCTTCTG
GGCGTTCCTGCACCTGAGAATGGGCATCCCTCGGTCTATGTTGAGGAGTT
GAATGCACAGCACATGCACGCGGGTCAAAATGATCTAGATATCGAGTACA
CCACCAATCAACCGACCCAAGGCCTGGCAGATAATATTGGTGCAGGTGAC
GCAAACGCAGGATACAACGATGATGGAATCAACGGTTTGTTTGGGGACGC
AGAGCAAAATATACCTAGGCAGAGTCTGGTGAACCTTTTAGAGGGAGATT
TGTTCTGGGATATTCCTGCTACAACAAGCAATGTGTCTCTTAACCACTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0042025host cell nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001461KJC3_001461Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001461-T1.exon1KJC3_001461-T1.exon1Aspergillus niger KJC3exon
KJC3_001461-T1.exon2KJC3_001461-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001461-T1.cdsKJC3_001461-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001461-T1KJC3_001461-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR007219
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
DBxrefPFAM:PF04082
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:3827978..3830289 +
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