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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:3847415..3848795+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001467-T1 ID=KJC3_001467-T1|Name=KJC3_001467-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1381bp|location=Sequence derived from alignment at ch1:3847415..3848795+ (Aspergillus niger KJC3)
CTTTTCCCTCTCCACATCTCGACATGGCTGGATTTCTAGGCCCCCGGGCC
ATCTTCTGGGCCTTCATCGTCCTCGCCACAGCCGTGATTTACAAAACCTA
CATACACAACTTCATCTTCCTCACCCTCGGTATTGGACGAGAGATCCAAC
CAATCGAGGACTTCCAATGGACCTGTGAACGTGTCCGACACTCTCTCTTG
GAGGGCTGTGAAGACCTGTGGCTCGATGAACAGAACCGAAAGCTGTACGC
AGCATGCAACAGCCTCGAGTCTCGCAAGGGTTGGTCGCCTGGAGGCAACC
ATTACAACATCTCCGCGAGATCCCGCACGGATCACATCGCTGTTATGGAT
GTTGACCAGCCTGGCTCAGATGGACTGTACGGTCTACGTCAGCTCAAGAT
CAGTGGATATCAGGATGATCTGGACTTGCATGGATTTGATGTCCGCAGGA
TTAAAGGCCGGCTTCGGTTCTGGTTGATCAATCACAGACCTCCTGTTAAC
CATGCCACTGGAGAATTCCTAGATGCTCCGGTCGTTGGGGCAAACTCTAC
TGTTGAGATTTTTGATCTGGATGAGACCTTGGACACGCTTGAGCATGTTA
ATACTGTGGCCAGCGAGGCGATTTTCACGCCCAACGGCGTGGCAGTGGAA
GAAGATGGTCTAGGATTCGTGATCACAAACGACCACAACACCAAGACTGG
AACGTTCCGTAATCTGGAAATGCTGTCTGGAGGCGGAAGTCTCGCATACT
GTCGATCTAACACAGGAAAATGCCATATCGCGGCTGACAGGGGATTTTCC
ATGGCTAACGGAATAGCCCATGACAAGAATGGCTACTACTATGTCGCTAA
CTCTGCGTCTGGGCTTATTACCGTTCATAAACTCGTCAATAACGAATTGA
TTCAGGTTGGATCGATCAATACCGGGTATCCAATGGATAACCTGCGGCTT
GATGTGGATGGTAACCTTATTGCAGCTGCGATCCCTGATTCAATTGCCCT
TATGAGATCTAGCATAGATCCATATAATTTTGTTGCCCCTGCTACTGTCC
TCACGATAAATGAGATTGCAAAGCAATTGAAGGCTTATGGAAGGAATGTC
AAAGTGTCAAAATTGGTGGAGGATAGAGATGCTAAACGCCTTCCCAGCTC
GACAGTCGCTGTGCATGATGCGAAGGGTCATAAGCTGTTTTTGGCGGGTA
TATTCTCTCCATTTATCACAATTTGTGAACAACGTCTCTAATTATCTATG
CCCAAGAGCGAGCACTATCTCGATCGATATATTTCAGAAACCTTTTTGTA
CATAACTCTACAGGCAGACCACTCACTCCGTTGGGCTGTGATAGGTGCAA
GGGGAATGAACATTCATTAAGAGTTTCCTCG back to topCoding sequence (CDS) from alignment at ch1:3847415..3848795+ >KJC3_001467-T1 ID=KJC3_001467-T1|Name=KJC3_001467-T1|organism=Aspergillus niger KJC3|type=CDS|length=1218bp|location=Sequence derived from alignment at ch1:3847415..3848795+ (Aspergillus niger KJC3)
ATGGCTGGATTTCTAGGCCCCCGGGCCATCTTCTGGGCCTTCATCGTCCT
CGCCACAGCCGTGATTTACAAAACCTACATACACAACTTCATCTTCCTCA
CCCTCGGTATTGGACGAGAGATCCAACCAATCGAGGACTTCCAATGGACC
TGTGAACGTGTCCGACACTCTCTCTTGGAGGGCTGTGAAGACCTGTGGCT
CGATGAACAGAACCGAAAGCTGTACGCAGCATGCAACAGCCTCGAGTCTC
GCAAGGGTTGGTCGCCTGGAGGCAACCATTACAACATCTCCGCGAGATCC
CGCACGGATCACATCGCTGTTATGGATGTTGACCAGCCTGGCTCAGATGG
ACTGTACGGTCTACGTCAGCTCAAGATCAGTGGATATCAGGATGATCTGG
ACTTGCATGGATTTGATGTCCGCAGGATTAAAGGCCGGCTTCGGTTCTGG
TTGATCAATCACAGACCTCCTGTTAACCATGCCACTGGAGAATTCCTAGA
TGCTCCGGTCGTTGGGGCAAACTCTACTGTTGAGATTTTTGATCTGGATG
AGACCTTGGACACGCTTGAGCATGTTAATACTGTGGCCAGCGAGGCGATT
TTCACGCCCAACGGCGTGGCAGTGGAAGAAGATGGTCTAGGATTCGTGAT
CACAAACGACCACAACACCAAGACTGGAACGTTCCGTAATCTGGAAATGC
TGTCTGGAGGCGGAAGTCTCGCATACTGTCGATCTAACACAGGAAAATGC
CATATCGCGGCTGACAGGGGATTTTCCATGGCTAACGGAATAGCCCATGA
CAAGAATGGCTACTACTATGTCGCTAACTCTGCGTCTGGGCTTATTACCG
TTCATAAACTCGTCAATAACGAATTGATTCAGGTTGGATCGATCAATACC
GGGTATCCAATGGATAACCTGCGGCTTGATGTGGATGGTAACCTTATTGC
AGCTGCGATCCCTGATTCAATTGCCCTTATGAGATCTAGCATAGATCCAT
ATAATTTTGTTGCCCCTGCTACTGTCCTCACGATAAATGAGATTGCAAAG
CAATTGAAGGCTTATGGAAGGAATGTCAAAGTGTCAAAATTGGTGGAGGA
TAGAGATGCTAAACGCCTTCCCAGCTCGACAGTCGCTGTGCATGATGCGA
AGGGTCATAAGCTGTTTTTGGCGGGTATATTCTCTCCATTTATCACAATT
TGTGAACAACGTCTCTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001467-T1.utr5p1 | KJC3_001467-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001467-T1.utr3p1 | KJC3_001467-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011042 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:3847415..3848795 + |
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