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KJC3_001509-T1, KJC3_001509-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001509-T1
Unique NameKJC3_001509-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:4005207..4006949+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001509-T1 ID=KJC3_001509-T1|Name=KJC3_001509-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1743bp|location=Sequence derived from alignment at ch1:4005207..4006949+ (Aspergillus niger KJC3)
AGTCCTCGAGGAGACACGGAGTTCGTCAGGAAAGTAATACTGAAGCAAAT
CCAAGGGGAGTATCCTGAAGCACCATGTCTGCGGGTTTTGATACACTCAA
AGCATTGTTGTCGCGGTAATTAGCCTCGATCTTGGTTTGAGACATGGGTT
AAGACATAATTTATAGCATGCGAGAAGATGGGAGGTTCTCAGATCTCCTA
GTCAGATGCCAATCTTCAACCTTCCACGTTCATTGCTGCATTGTGTGCCC
ACAGTCGCCATTTTTCGACAAGGCAGCAAATGGCAATTTCGAGGTAAATG
GGTTGGCGGTAGAACCCAAAGCCTGGTCGTTAACTTCCACATACATAGGA
ATCTGAATCCCGCGTCATCAACATTCACGATGACCCTTTCATCGTATCCA
AGTTGTTTGATTTTCTTTACCGTGCGGACTACGATGACTCACCAGACGAT
ACGGATGGTCCAGGTGCGGATAATGAATCTGCTGCGAACCAAGAGGGAAT
ATCACCGACCGAGCGTATCTCCCAAGATGCTCTTTCAAGGCAGTGGAGGC
GTGCACAGACCAATGTGCAAATCTATATTATAGCCGATAAGTATATGATT
GAAGGACTGAAAGATATATCCAAAAGAAAGTTGAACTCCAACATGGAAAA
TAACTGGGACGACTGCGGATTTCTCACGGTTGTCAGCGATGTCTATGGGT
CTCAGTGTCCGCCAAGATCAGACCTACGTGAAATTATCATACGCTTCGCT
CTTCGACATCTCGGTACGCTTCAGAAATTCCGGCAGTTTGATGACGCCCG
AAAAGAATACCCCGAGTTTGTGTATGAACTGTCCACGGCTTTGATAGAAC
GAGTTGTCGAACTGGAAAAGAGAACATGGTAGGGGCGCCTTTGTCTAGAA
CCTCACCCGCCTAGACTGGAAGGCTTAGCAATTCTATTTAGTGACAATCG
GATTGTTAAGCCGAGTATCTTCCGCTCTGTTCCTGTTCCATCCGTGCGAC
AAACGCCCAGACATTTCTACTGCGGGCTTTGTACTAGGTCTTTCGAGAGC
AGAACTGGCCTTCGGCAGCATGACAGCGCTGTACATAGCTGGTGCACTGA
TTGTGGACAACCATTCCGGTCGCCCGAAAAAGCTCGAAAACACCGCCTGA
GCAGACATGGTGGGTTTTAGTGGGAAGAGAACTTGTCCATTGTACTTGAT
GTGGAAGGTACATCTGCTTCGTGGCACGGATGGCGCACGCTCGTTGTTAT
GGTGCCCCTGGAAAATGAAACATACGGATCCTTCTGTAAAGAATGGACGG
CCAGCTGTCAGCAGCGCCCTGTGGAGCAAGAATGACCAATAGGTTAGCCC
CAGCTCGTGGGTCGGGCTCCAGGCGCATTGTTGGACAACTGAGAAGGTAG
ATACCTGCAGTATGGCACCTGTTTAGCCGCACGCAATCGTACAGTGAGGT
CCGTTTCTCGCCATCCAAGTCGCCGTGCTCACGGGCGCGATCCCTTGTTG
CCTTGGGACAATCGGCACGCATTCGGATTTACTCATACTCTGTCCCAGCG
ACTCTGGAAGATCATGGCAATGCGGGAGCTGCTTTTCCGCTTACTATCGT
CTCATAGTAAGTACCCTTGTCACGACACATAAGGTGTGTCTTTCTCGCGC
TGTTATTCTTGTATCGGACAATGCTAACTCAGCAGATAGCGGCTGTCGCA
ATTGAGGTTGAGGAGCGTAGGACGCCAATATTTCTAAGTCAGC
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Coding sequence (CDS) from alignment at ch1:4005207..4006949+

>KJC3_001509-T1 ID=KJC3_001509-T1|Name=KJC3_001509-T1|organism=Aspergillus niger KJC3|type=CDS|length=3708bp|location=Sequence derived from alignment at ch1:4005207..4006949+ (Aspergillus niger KJC3)
ATGTCTGCGGGTTTTGATACACTCAAAGCATTGTTGTCGCGCATGCGAGA
AGATGGGAGGTTCTCAGATCTCCTAGTCAGATGCCAATCTTCAACCTTCC
ACGTTCATTGCTGCATTGTGTGCCCACAGTCGCCATTTTTCGACAAGGCA
GCAAATGGCAATTTCGAGGAATCTGAATCCCGCGTCATCAACATTCACGA
TGACCCTTTCATCGTATCCAAGTTGTTTGATTTTCTTTACCGTGCGGACT
ACGATGACTCACCAGACGATACGGATGGTCCAGGTGCGGATAATGAATCT
GCTGCGAACCAAGAGGGAATATCACCGACCGAGCGTATCTCCCAAGATGC
TCTTTCAAGGCAGTGGAGGCGTGCACAGACCAATGTGCAAATCTATATTA
TAGCCGATAAGTATATGATTGAAGGACTGAAAGATATATCCAAAAGAAAG
TTGAACTCCAACATGGAAAATAACTGGGACGACTGCGGATTTCTCACGGT
TGTCAGCGATGTCTATGGGTCTCAGTGTCCGCCAAGATCAGACCTACGTG
AAATTATCATACGCTTCGCTCTTCGACATCTCGGTACGCTTCAGAAATTC
CGGCAGTTTGATGACGCCCGAAAAGAATACCCCGAGTTTGTGTATGAACT
GTCCACGGCTTTGATAGAACGAGTTGTCGAACTGGAAAAGAGAACATGTG
ACAATCGGATTGTTAAGCCGAGTATCTTCCGCTCTGTTCCTGTTCCATCC
GTGCGACAAACGCCCAGACATTTCTACTGCGGGCTTTGTACTAGGTCTTT
CGAGAGCAGAACTGGCCTTCGGCAGCATGACAGCGCTGTACATAGCTGGT
GCACTGATTGTGGACAACCATTCCGGTCGCCCGAAAAAGCTCGAAAACAC
CGCCTGAGCAGACATGGTGGGTTTTAGATGTCTGCGGGTTTTGATACACT
CAAAGCATTGTTGTCGCGCATGCGAGAAGATGGGAGGTTCTCAGATCTCC
TAGTCAGATGCCAATCTTCAACCTTCCACGTTCATTGCTGCATTGTGTGC
CCACAGTCGCCATTTTTCGACAAGGCAGCAAATGGCAATTTCGAGGAATC
TGAATCCCGCGTCATCAACATTCACGATGACCCTTTCATCGTATCCAAGT
TGTTTGATTTTCTTTACCGTGCGGACTACGATGACTCACCAGACGATACG
GATGGTCCAGGTGCGGATAATGAATCTGCTGCGAACCAAGAGGGAATATC
ACCGACCGAGCGTATCTCCCAAGATGCTCTTTCAAGGCAGTGGAGGCGTG
CACAGACCAATGTGCAAATCTATATTATAGCCGATAAGTATATGATTGAA
GGACTGAAAGATATATCCAAAAGAAAGTTGAACTCCAACATGGAAAATAA
CTGGGACGACTGCGGATTTCTCACGGTTGTCAGCGATGTCTATGGGTCTC
AGTGTCCGCCAAGATCAGACCTACGTGAAATTATCATACGCTTCGCTCTT
CGACATCTCGGTACGCTTCAGAAATTCCGGCAGTTTGATGACGCCCGAAA
AGAATACCCCGAGTTTGTGTATGAACTGTCCACGGCTTTGATAGAACGAG
TTGTCGAACTGGAAAAGAGAACATGTGACAATCGGATTGTTAAGCCGAGT
ATCTTCCGCTCTGTTCCTGTTCCATCCGTGCGACAAACGCCCAGACATTT
CTACTGCGGGCTTTGTACTAGGTCTTTCGAGAGCAGAACTGGCCTTCGGC
AGCATGACAGCGCTGTACATAGCTGGTGCACTGATTGTGGACAACCATTC
CGGTCGCCCGAAAAAGCTCGAAAACACCGCCTGAGCAGACATGGTGGGTT
TTAGATGTCTGCGGGTTTTGATACACTCAAAGCATTGTTGTCGCGCATGC
GAGAAGATGGGAGGTTCTCAGATCTCCTAGTCAGATGCCAATCTTCAACC
TTCCACGTTCATTGCTGCATTGTGTGCCCACAGTCGCCATTTTTCGACAA
GGCAGCAAATGGCAATTTCGAGGAATCTGAATCCCGCGTCATCAACATTC
ACGATGACCCTTTCATCGTATCCAAGTTGTTTGATTTTCTTTACCGTGCG
GACTACGATGACTCACCAGACGATACGGATGGTCCAGGTGCGGATAATGA
ATCTGCTGCGAACCAAGAGGGAATATCACCGACCGAGCGTATCTCCCAAG
ATGCTCTTTCAAGGCAGTGGAGGCGTGCACAGACCAATGTGCAAATCTAT
ATTATAGCCGATAAGTATATGATTGAAGGACTGAAAGATATATCCAAAAG
AAAGTTGAACTCCAACATGGAAAATAACTGGGACGACTGCGGATTTCTCA
CGGTTGTCAGCGATGTCTATGGGTCTCAGTGTCCGCCAAGATCAGACCTA
CGTGAAATTATCATACGCTTCGCTCTTCGACATCTCGGTACGCTTCAGAA
ATTCCGGCAGTTTGATGACGCCCGAAAAGAATACCCCGAGTTTGTGTATG
AACTGTCCACGGCTTTGATAGAACGAGTTGTCGAACTGGAAAAGAGAACA
TGTGACAATCGGATTGTTAAGCCGAGTATCTTCCGCTCTGTTCCTGTTCC
ATCCGTGCGACAAACGCCCAGACATTTCTACTGCGGGCTTTGTACTAGGT
CTTTCGAGAGCAGAACTGGCCTTCGGCAGCATGACAGCGCTGTACATAGC
TGGTGCACTGATTGTGGACAACCATTCCGGTCGCCCGAAAAAGCTCGAAA
ACACCGCCTGAGCAGACATGGTGGGTTTTAGATGTCTGCGGGTTTTGATA
CACTCAAAGCATTGTTGTCGCGCATGCGAGAAGATGGGAGGTTCTCAGAT
CTCCTAGTCAGATGCCAATCTTCAACCTTCCACGTTCATTGCTGCATTGT
GTGCCCACAGTCGCCATTTTTCGACAAGGCAGCAAATGGCAATTTCGAGG
AATCTGAATCCCGCGTCATCAACATTCACGATGACCCTTTCATCGTATCC
AAGTTGTTTGATTTTCTTTACCGTGCGGACTACGATGACTCACCAGACGA
TACGGATGGTCCAGGTGCGGATAATGAATCTGCTGCGAACCAAGAGGGAA
TATCACCGACCGAGCGTATCTCCCAAGATGCTCTTTCAAGGCAGTGGAGG
CGTGCACAGACCAATGTGCAAATCTATATTATAGCCGATAAGTATATGAT
TGAAGGACTGAAAGATATATCCAAAAGAAAGTTGAACTCCAACATGGAAA
ATAACTGGGACGACTGCGGATTTCTCACGGTTGTCAGCGATGTCTATGGG
TCTCAGTGTCCGCCAAGATCAGACCTACGTGAAATTATCATACGCTTCGC
TCTTCGACATCTCGGTACGCTTCAGAAATTCCGGCAGTTTGATGACGCCC
GAAAAGAATACCCCGAGTTTGTGTATGAACTGTCCACGGCTTTGATAGAA
CGAGTTGTCGAACTGGAAAAGAGAACATGTGACAATCGGATTGTTAAGCC
GAGTATCTTCCGCTCTGTTCCTGTTCCATCCGTGCGACAAACGCCCAGAC
ATTTCTACTGCGGGCTTTGTACTAGGTCTTTCGAGAGCAGAACTGGCCTT
CGGCAGCATGACAGCGCTGTACATAGCTGGTGCACTGATTGTGGACAACC
ATTCCGGTCGCCCGAAAAAGCTCGAAAACACCGCCTGAGCAGACATGGTG
GGTTTTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001509KJC3_001509Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001509-T1KJC3_001509-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001509-T1.utr5p1KJC3_001509-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001509-T1.exon1KJC3_001509-T1.exon1Aspergillus niger KJC3exon
KJC3_001509-T1.exon2KJC3_001509-T1.exon2Aspergillus niger KJC3exon
KJC3_001509-T1.exon3KJC3_001509-T1.exon3Aspergillus niger KJC3exon
KJC3_001509-T1.exon4KJC3_001509-T1.exon4Aspergillus niger KJC3exon
KJC3_001509-T1.exon5KJC3_001509-T1.exon5Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001509-T1.cdsKJC3_001509-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001509-T1.utr3p1KJC3_001509-T1.utr3p1Aspergillus niger KJC3three_prime_UTR
KJC3_001509-T1.utr3p2KJC3_001509-T1.utr3p2Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR011333
DBxrefInterPro:IPR000210
DBxrefInterPro:IPR013087
DBxrefPFAM:PF00651
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:4005207..4006949 +
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