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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:4025621..4027659- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001514-T1 ID=KJC3_001514-T1|Name=KJC3_001514-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2039bp|location=Sequence derived from alignment at ch1:4025621..4027659- (Aspergillus niger KJC3)
ATGGTGTTGAGGTACCACCCTTGCCCTTCCATTTCGGAGCTCATACCGGA
TGAAGATACTTTAGAGTTGTACCGACAACACGAGCTCGCTGGCCATGGCG
AGACAGGTTTAAGTGGATTGAGTCTGAAGGAGAAGCAGGTTATTGAGCGG
CTCCAGGCCCGGCAACAGGACCTGCCGTTACTGAACATGCTTCTTCAGGC
GCTGCGGATTCCTGGGCTCCGTCCTGGGTTCATGGCGGGAAACATCAACC
GATTGCTGCGTATGAAATGCCCACATGTAGGAAACCCGCAACATCCCAAA
TGTTGCAGATCAACCAGAAATGCAGGCTGACATAGTGCAAGGAGCATGCG
CATTACATCCAGCACATCCTGAATGTCTGGGCCTATATCATGGGCCCCCA
ACATGTCTCCGATTTGGATGCCGAATCTGTTCGGCTGTTGCAGGGCCGGT
CGCCGGTATGGTCTACCACTGACCACGATTTTATCAGGCGCCTCCTGTCG
ATAGGCGTACTCTTTCCGGGAGTGACAGACCCAGAGAGACGTGCGCTCCT
TTCCCGTCGGCTTCTTTCTGTAGCGACTATCATTCCGTCGCTACGCACGT
TTATGGAGGATACGAAATATCTCCTGCCGTGTGCGCTGGCATTGCGAAGG
CTCATCCCAGATGCTCCTGGGGATACAATCCAAACTTGCCTCTGGCACTA
TTACAGCGCACCCGAACCGCATACAAAAAATGGCCGAGCGACGTTCCTCC
ACGCATACCGACGGTTATGGCTATTCACCATGCGGTGCTTCCCCCATCTG
GTCAGCATCATGCCTCTTCGCGACCGTCGTGGAGCAGCAAGACGCGTCCA
TCGATCGCGGGAGAAATCTAAGCGCTGTTGGACGGCCCTGGCTCATCTTG
CGTGGTCGCAGGGCTTTCGTACACCCAAAATTGCTGCGATACTCCAGCAG
TGGGGGTTCCGACCAGTTCAATGTCAACGCCAGGGACACTTCCAAGAGCC
CTACTTAACCCGAAATGGGACAGGCCCCTGGAAGCTGCGCCATCGGTGCG
GCATGCCCTCTGAAATGGCTTTTTTGCAAAGTCAGCCGTTCCTGACGCTG
CACAATATAGACACCCACCGGGATTGTGTTGCAGGAGAGGACCTAACTCC
ATTTGCGGTCGCTCGGGGTATCTTTCAGGCGTTCCTTGGCAACCTTCCAA
CCTTACCCGAACCGGTCGCAAATGCGTCCCTGCACACCTACAAGGCCCGA
AACAAGGAGCATAGATTCCTTCCATCTCAGCCTGTGGCCACCTTTCATAG
CCCGGATCACAGTGTGCATCTCTTATCCCCCTCCATGTGTCACGAGCCAA
GGAGGGTTCTTGCCACCAATGGCAGTCACCTGGAAACAGATAGGCGGAGG
ACTAGTGCCGAGCCGCTGCTGCACGATGTATGGCAGGATGGTAACACACC
CGGGCAACGAATCGATTACAGCCCGTCTAGCTATGGTTCCCCAGCCGCCT
CATCACATGGTGAGCTTGCCAGAAGGCCGCTCTTTGATTCGGCGGAGCTG
GTACGAATAGGCGACAGTAATCCCTTCAGTTCATTCACCACACGAATAGA
TTCGCCCCACCCCCAATATACACCAGTCCACAAATGTCCTCCAACCGCGG
TGTCACCGGTTGCTGGCCCGTCGCACTCTCGGCTCGGGCTTCTGGGGTGG
AAGACTCGGAAGAGGCCGCAAGACCTGCCATCGCCAGGATCATCAGGAGC
AGAGGGTAAAGGCATTCTGTACGAGATGGGAACACCGGCAACTGTGTACT
ATTTGCCTTTGCCCCGCGCGCGTCGCCTTTTTAAGCAATACCTTGACAGC
CATCCTCACTTCGTCTATGCAAGACTGACTTCTAAAGGGCACCGCCTAGT
TGATCCGGCAGCCGTTCCTGGCCACCTGAGACATGCTGTGGTGGTTGCCG
GTCCCAAGCAATTAATGTCCCTATGTGATGAAGATAATGCGCTGATAGAA
GACAAGGACGAGCACTGTGCACAAGATGCGCAGGCCTAA back to topCoding sequence (CDS) from alignment at ch1:4025621..4027659- >KJC3_001514-T1 ID=KJC3_001514-T1|Name=KJC3_001514-T1|organism=Aspergillus niger KJC3|type=CDS|length=3948bp|location=Sequence derived from alignment at ch1:4025621..4027659- (Aspergillus niger KJC3)
GAGCATGCGCATTACATCCAGCACATCCTGAATGTCTGGGCCTATATCAT
GGGCCCCCAACATGTCTCCGATTTGGATGCCGAATCTGTTCGGCTGTTGC
AGGGCCGGTCGCCGGTATGGTCTACCACTGACCACGATTTTATCAGGCGC
CTCCTGTCGATAGGCGTACTCTTTCCGGGAGTGACAGACCCAGAGAGACG
TGCGCTCCTTTCCCGTCGGCTTCTTTCTGTAGCGACTATCATTCCGTCGC
TACGCACGTTTATGGAGGATACGAAATATCTCCTGCCGTGTGCGCTGGCA
TTGCGAAGGCTCATCCCAGATGCTCCTGGGGATACAATCCAAACTTGCCT
CTGGCACTATTACAGCGCACCCGAACCGCATACAAAAAATGGCCGAGCGA
CGTTCCTCCACGCATACCGACGGTTATGGCTATTCACCATGCGGTGCTTC
CCCCATCTGGTCAGCATCATGCCTCTTCGCGACCGTCGTGGAGCAGCAAG
ACGCGTCCATCGATCGCGGGAGAAATCTAAGCGCTGTTGGACGGCCCTGG
CTCATCTTGCGTGGTCGCAGGGCTTTCGTACACCCAAAATTGCTGCGATA
CTCCAGCAGTGGGGGTTCCGACCAGTTCAATGTCAACGCCAGGGACACTT
CCAAGAGCCCTACTTAACCCGAAATGGGACAGGCCCCTGGAAGCTGCGCC
ATCGGTGCGGCATGCCCTCTGAAATGGCTTTTTTGCAAAGTCAGCCGTTC
CTGACGCTGCACAATATAGACACCCACCGGGATTGTGTTGCAGGAGAGGA
CCTAACTCCATTTGCGGTCGCTCGGGGTATCTTTCAGGCGTTCCTTGGCA
ACCTTCCAACCTTACCCGAACCGGTCGCAAATGCGTCCCTGCACACCTAC
AAGGCCCGAAACAAGGAGCATAGATTCCTTCCATCTCAGCCTGTGGCCAC
CTTTCATAGCCCGGATCACAGTGTGCATCTCTTATCCCCCTCCATGTGTC
ACGAGCCAAGGAGGGTTCTTGCCACCAATGGCAGTCACCTGGAAACAGAT
AGGCGGAGGACTAGTGCCGAGCCGCTGCTGCACGATGTATGGCAGGATGG
TAACACACCCGGGCAACGAATCGATTACAGCCCGTCTAGCTATGGTTCCC
CAGCCGCCTCATCACATGGTGAGCTTGCCAGAAGGCCGCTCTTTGATTCG
GCGGAGCTGGTACGAATAGGCGACAGTAATCCCTTCAGTTCATTCACCAC
ACGAATAGATTCGCCCCACCCCCAATATACACCAGTCCACAAATGTCCTC
CAACCGCGGTGTCACCGGTTGCTGGCCCGTCGCACTCTCGGCTCGGGCTT
CTGGGGTGGAAGACTCGGAAGAGGCCGCAAGACCTGCCATCGCCAGGATC
ATCAGGAGCAGAGGGTAAAGGCATTCTGTACGAGATGGGAACACCGGCAA
CTGTGTACTATTTGCCTTTGCCCCGCGCGCGTCGCCTTTTTAAGCAATAC
CTTGACAGCCATCCTCACTTCGTCTATGCAAGACTGACTTCTAAAGGGCA
CCGCCTAGTTGATCCGGCAGCCGTTCCTGGCCACCTGAGACATGCTGTGG
TGGTTGCCGGTCCCAAGCAATTAATGTCCCTATGTGATGAAGATAATGCG
CTGATAGAAGACAAGGACGAGCACTGTGCACAAGATGCGCAGGCCTAAAT
GGTGTTGAGGTACCACCCTTGCCCTTCCATTTCGGAGCTCATACCGGATG
AAGATACTTTAGAGTTGTACCGACAACACGAGCTCGCTGGCCATGGCGAG
ACAGGTTTAAGTGGATTGAGTCTGAAGGAGAAGCAGGTTATTGAGCGGCT
CCAGGCCCGGCAACAGGACCTGCCGTTACTGAACATGCTTCTTCAGGCGC
TGCGGATTCCTGGGCTCCGTCCTGGGTTCATGGCGGGAAACATCAACCGA
TTGCTGCGTATGAAATGCCCACATGAGCATGCGCATTACATCCAGCACAT
CCTGAATGTCTGGGCCTATATCATGGGCCCCCAACATGTCTCCGATTTGG
ATGCCGAATCTGTTCGGCTGTTGCAGGGCCGGTCGCCGGTATGGTCTACC
ACTGACCACGATTTTATCAGGCGCCTCCTGTCGATAGGCGTACTCTTTCC
GGGAGTGACAGACCCAGAGAGACGTGCGCTCCTTTCCCGTCGGCTTCTTT
CTGTAGCGACTATCATTCCGTCGCTACGCACGTTTATGGAGGATACGAAA
TATCTCCTGCCGTGTGCGCTGGCATTGCGAAGGCTCATCCCAGATGCTCC
TGGGGATACAATCCAAACTTGCCTCTGGCACTATTACAGCGCACCCGAAC
CGCATACAAAAAATGGCCGAGCGACGTTCCTCCACGCATACCGACGGTTA
TGGCTATTCACCATGCGGTGCTTCCCCCATCTGGTCAGCATCATGCCTCT
TCGCGACCGTCGTGGAGCAGCAAGACGCGTCCATCGATCGCGGGAGAAAT
CTAAGCGCTGTTGGACGGCCCTGGCTCATCTTGCGTGGTCGCAGGGCTTT
CGTACACCCAAAATTGCTGCGATACTCCAGCAGTGGGGGTTCCGACCAGT
TCAATGTCAACGCCAGGGACACTTCCAAGAGCCCTACTTAACCCGAAATG
GGACAGGCCCCTGGAAGCTGCGCCATCGGTGCGGCATGCCCTCTGAAATG
GCTTTTTTGCAAAGTCAGCCGTTCCTGACGCTGCACAATATAGACACCCA
CCGGGATTGTGTTGCAGGAGAGGACCTAACTCCATTTGCGGTCGCTCGGG
GTATCTTTCAGGCGTTCCTTGGCAACCTTCCAACCTTACCCGAACCGGTC
GCAAATGCGTCCCTGCACACCTACAAGGCCCGAAACAAGGAGCATAGATT
CCTTCCATCTCAGCCTGTGGCCACCTTTCATAGCCCGGATCACAGTGTGC
ATCTCTTATCCCCCTCCATGTGTCACGAGCCAAGGAGGGTTCTTGCCACC
AATGGCAGTCACCTGGAAACAGATAGGCGGAGGACTAGTGCCGAGCCGCT
GCTGCACGATGTATGGCAGGATGGTAACACACCCGGGCAACGAATCGATT
ACAGCCCGTCTAGCTATGGTTCCCCAGCCGCCTCATCACATGGTGAGCTT
GCCAGAAGGCCGCTCTTTGATTCGGCGGAGCTGGTACGAATAGGCGACAG
TAATCCCTTCAGTTCATTCACCACACGAATAGATTCGCCCCACCCCCAAT
ATACACCAGTCCACAAATGTCCTCCAACCGCGGTGTCACCGGTTGCTGGC
CCGTCGCACTCTCGGCTCGGGCTTCTGGGGTGGAAGACTCGGAAGAGGCC
GCAAGACCTGCCATCGCCAGGATCATCAGGAGCAGAGGGTAAAGGCATTC
TGTACGAGATGGGAACACCGGCAACTGTGTACTATTTGCCTTTGCCCCGC
GCGCGTCGCCTTTTTAAGCAATACCTTGACAGCCATCCTCACTTCGTCTA
TGCAAGACTGACTTCTAAAGGGCACCGCCTAGTTGATCCGGCAGCCGTTC
CTGGCCACCTGAGACATGCTGTGGTGGTTGCCGGTCCCAAGCAATTAATG
TCCCTATGTGATGAAGATAATGCGCTGATAGAAGACAAGGACGAGCACTG
TGCACAAGATGCGCAGGCCTAAATGGTGTTGAGGTACCACCCTTGCCCTT
CCATTTCGGAGCTCATACCGGATGAAGATACTTTAGAGTTGTACCGACAA
CACGAGCTCGCTGGCCATGGCGAGACAGGTTTAAGTGGATTGAGTCTGAA
GGAGAAGCAGGTTATTGAGCGGCTCCAGGCCCGGCAACAGGACCTGCCGT
TACTGAACATGCTTCTTCAGGCGCTGCGGATTCCTGGGCTCCGTCCTGGG
TTCATGGCGGGAAACATCAACCGATTGCTGCGTATGAAATGCCCACAT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR022198 |
| DBxref | PFAM:PF12520 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:4025621..4027659 - |
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