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KJC3_001523-T1, KJC3_001523-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001523-T1
Unique NameKJC3_001523-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:4065209..4066793-

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001523-T1 ID=KJC3_001523-T1|Name=KJC3_001523-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1585bp|location=Sequence derived from alignment at ch1:4065209..4066793- (Aspergillus niger KJC3)
ATGAGTAAAGCCACGCGATCTCCATGGTTGAAACACCGAGAATTATTATG
CACTATCACGGTGAGAGGAACCATGGTGGGGATCACGCGAAGCGAGGGTT
GCTTCCATAGCTAGATGCAGTGCAATTTCAGACTTTCTTTGCCAAAGTAT
GCGATGCGATTAGCCTGGTATCGTGAAAGAAAATGATTGTTAAGAGTATC
TCCAGAATACCTACTGCAACATATACGTGATTCTTGCCTAGCCCCATACA
GGCAGTACATCTAACTCATTACTCATATTTCTCCACCAATCGTGCTTTGA
CACATGTCGACCATTCTGCACTAAGATGGTACAAGTCTAGAGATCTTCCA
TCCTCCCTTCCGACTAGAAAAGCTATGGCAGGCAAAAACAAGAGGAAACA
AAGACCACCACAACTGCTCAGTCCGATCGTCTTTTCGGAAATTGAAACCT
TGAATGAAGATTTGCCGCCCACCTCTCGTCAAATCTCGCCCCTTGATGAA
ACGAATAGTATAATGAGAGAAGCACGAGAATTACCGTATTTTGAGTGAGC
TACTCCTTTCAAAGTGCATTTGTAGTAGAGGTTGACCTAAATCAGCTTTC
TAGACTCCGATCCTGTTTCCCTTCAAGTTGGTCAAACGGGACGTTCGTTT
AGGATCCATCGAACGCTGCTTCACTCAAAGTCCTCACCATTGATTGCAGC
CTTGGACAGTAATCTCAAGGAAGGCCAGAGCGGCGTGTATGTATTTGAAG
ACGTGGCAGAGGGTACAATTGCGCGATTTATCGAATGGGCATACCGAGGC
GATTATCCCGCCACAATCAGCGGAACCAACATTGGACAGACTCCAATTTT
GCTGGAAGGCACGGAGACGGATATTGACGAGAAGCCTGAAAACACAACTC
CCGAAACCGACTCGACGTCAGAGAACCACCCCCTTCTTGTCCATATCCGT
CTATACATATTTTCTGAGACTTACATTGTTCCCGATCTTCAACAGCTGGC
TTTTGAAAAAGTGACTGCTTGCATAACGGACTTGGACAAACCGAACCGTC
TCGACACACAACTCGCAGTAATTGATGCTTTACGGTTCTCTTTCCTCGGG
CTCCCGCAACACGATAAATTGTTAGACTGGTTGGCTCAGTACGCTGCATA
TTGTTTAGAAAAGCTCCGGGTACAAGGCCCATTTCATGATCTCCTTAAAG
AGTTCCCGACCTTGAGCTCCCGCATGATACTGTGTCTGGGGCCAGCATCG
ACTCCACCATGGCGGACTACACAACCAAAATACCCATTTATCCAGTACTC
TGCTAAATGGTCGGAAGACAAACATGGTCACTAGCATAAGCACAACAGCC
CTGCTAGATTATGGATCTTTCCATCGTTCTCTATTTAGAACATGACCTTC
TGCGGTGACATCTCAATTTACTTGATCTCGATTGGTTAGGAGAAGTGATC
ACGCTATTCAACTCAGTTTTACGGCAATTTAAAGTCATAGGTATCTTTTG
CATGTACCGCGGTCAATTGTTCCACTGTCATCAACGTCATTATGAGCTTT
GACTCCATTATCTGCTTACTGTACGCACCGCACAC
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Coding sequence (CDS) from alignment at ch1:4065209..4066793-

>KJC3_001523-T1 ID=KJC3_001523-T1|Name=KJC3_001523-T1|organism=Aspergillus niger KJC3|type=CDS|length=3276bp|location=Sequence derived from alignment at ch1:4065209..4066793- (Aspergillus niger KJC3)
CTTTCTAGACTCCGATCCTGTTTCCCTTCAAGTTGGTCAAACGGGACGTT
CGTTTAGGATCCATCGAACGCTGCTTCACTCAAAGTCCTCACCATTGATT
GCAGCCTTGGACAGTAATCTCAAGGAAGGCCAGAGCGGCGTGTATGTATT
TGAAGACGTGGCAGAGGGTACAATTGCGCGATTTATCGAATGGGCATACC
GAGGCGATTATCCCGCCACAATCAGCGGAACCAACATTGGACAGACTCCA
ATTTTGCTGGAAGGCACGGAGACGGATATTGACGAGAAGCCTGAAAACAC
AACTCCCGAAACCGACTCGACGTCAGAGAACCACCCCCTTCTTGTCCATA
TCCGTCTATACATATTTTCTGAGACTTACATTGTTCCCGATCTTCAACAG
CTGGCTTTTGAAAAAGTGACTGCTTGCATAACGGACTTGGACAAACCGAA
CCGTCTCGACACACAACTCGCAGTAATTGATGCTTTACGGTTCTCTTTCC
TCGGGCTCCCGCAACACGATAAATTGTTAGACTGGTTGGCTCAGTACGCT
GCATATTGTTTAGAAAAGCTCCGGGTACAAGGCCCATTTCATGATCTCCT
TAAAGAGTTCCCGACCTTGAGCTCCCGCATGATACTGTGTCTGGGGCCAG
CATCGACTCCACCATGGCGGACTACACAACCAAAATACCCATTTATCCAG
TACTCTGCTAAATGGTCGGAAGACAAACATGGTCACTAGGCAGTACATCT
AACTCATTACTCATATTTCTCCACCAATCGTGCTTTGACACATGTCGACC
ATTCTGCACTAAGATGGTACAAGTCTAGAGATCTTCCATCCTCCCTTCCG
ACTAGAAAAGCTATGGCAGGCAAAAACAAGAGGAAACAAAGACCACCACA
ACTGCTCAGTCCGATCGTCTTTTCGGAAATTGAAACCTTGAATGAAGATT
TGCCGCCCACCTCTCGTCAAATCTCGCCCCTTGATGAAACGAATAGTATA
ATGAGAGAAGCACGAGAATTACCGTATTTTGAATGAGTAAAGCCACGCGA
TCTCCATGGTTGAAACACCGAGAATTATTATGCACTATCACGCTTTCTAG
ACTCCGATCCTGTTTCCCTTCAAGTTGGTCAAACGGGACGTTCGTTTAGG
ATCCATCGAACGCTGCTTCACTCAAAGTCCTCACCATTGATTGCAGCCTT
GGACAGTAATCTCAAGGAAGGCCAGAGCGGCGTGTATGTATTTGAAGACG
TGGCAGAGGGTACAATTGCGCGATTTATCGAATGGGCATACCGAGGCGAT
TATCCCGCCACAATCAGCGGAACCAACATTGGACAGACTCCAATTTTGCT
GGAAGGCACGGAGACGGATATTGACGAGAAGCCTGAAAACACAACTCCCG
AAACCGACTCGACGTCAGAGAACCACCCCCTTCTTGTCCATATCCGTCTA
TACATATTTTCTGAGACTTACATTGTTCCCGATCTTCAACAGCTGGCTTT
TGAAAAAGTGACTGCTTGCATAACGGACTTGGACAAACCGAACCGTCTCG
ACACACAACTCGCAGTAATTGATGCTTTACGGTTCTCTTTCCTCGGGCTC
CCGCAACACGATAAATTGTTAGACTGGTTGGCTCAGTACGCTGCATATTG
TTTAGAAAAGCTCCGGGTACAAGGCCCATTTCATGATCTCCTTAAAGAGT
TCCCGACCTTGAGCTCCCGCATGATACTGTGTCTGGGGCCAGCATCGACT
CCACCATGGCGGACTACACAACCAAAATACCCATTTATCCAGTACTCTGC
TAAATGGTCGGAAGACAAACATGGTCACTAGGCAGTACATCTAACTCATT
ACTCATATTTCTCCACCAATCGTGCTTTGACACATGTCGACCATTCTGCA
CTAAGATGGTACAAGTCTAGAGATCTTCCATCCTCCCTTCCGACTAGAAA
AGCTATGGCAGGCAAAAACAAGAGGAAACAAAGACCACCACAACTGCTCA
GTCCGATCGTCTTTTCGGAAATTGAAACCTTGAATGAAGATTTGCCGCCC
ACCTCTCGTCAAATCTCGCCCCTTGATGAAACGAATAGTATAATGAGAGA
AGCACGAGAATTACCGTATTTTGAATGAGTAAAGCCACGCGATCTCCATG
GTTGAAACACCGAGAATTATTATGCACTATCACGCTTTCTAGACTCCGAT
CCTGTTTCCCTTCAAGTTGGTCAAACGGGACGTTCGTTTAGGATCCATCG
AACGCTGCTTCACTCAAAGTCCTCACCATTGATTGCAGCCTTGGACAGTA
ATCTCAAGGAAGGCCAGAGCGGCGTGTATGTATTTGAAGACGTGGCAGAG
GGTACAATTGCGCGATTTATCGAATGGGCATACCGAGGCGATTATCCCGC
CACAATCAGCGGAACCAACATTGGACAGACTCCAATTTTGCTGGAAGGCA
CGGAGACGGATATTGACGAGAAGCCTGAAAACACAACTCCCGAAACCGAC
TCGACGTCAGAGAACCACCCCCTTCTTGTCCATATCCGTCTATACATATT
TTCTGAGACTTACATTGTTCCCGATCTTCAACAGCTGGCTTTTGAAAAAG
TGACTGCTTGCATAACGGACTTGGACAAACCGAACCGTCTCGACACACAA
CTCGCAGTAATTGATGCTTTACGGTTCTCTTTCCTCGGGCTCCCGCAACA
CGATAAATTGTTAGACTGGTTGGCTCAGTACGCTGCATATTGTTTAGAAA
AGCTCCGGGTACAAGGCCCATTTCATGATCTCCTTAAAGAGTTCCCGACC
TTGAGCTCCCGCATGATACTGTGTCTGGGGCCAGCATCGACTCCACCATG
GCGGACTACACAACCAAAATACCCATTTATCCAGTACTCTGCTAAATGGT
CGGAAGACAAACATGGTCACTAGGCAGTACATCTAACTCATTACTCATAT
TTCTCCACCAATCGTGCTTTGACACATGTCGACCATTCTGCACTAAGATG
GTACAAGTCTAGAGATCTTCCATCCTCCCTTCCGACTAGAAAAGCTATGG
CAGGCAAAAACAAGAGGAAACAAAGACCACCACAACTGCTCAGTCCGATC
GTCTTTTCGGAAATTGAAACCTTGAATGAAGATTTGCCGCCCACCTCTCG
TCAAATCTCGCCCCTTGATGAAACGAATAGTATAATGAGAGAAGCACGAG
AATTACCGTATTTTGAATGAGTAAAGCCACGCGATCTCCATGGTTGAAAC
ACCGAGAATTATTATGCACTATCACG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001523KJC3_001523Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001523-T1KJC3_001523-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001523-T1.cdsKJC3_001523-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001523-T1.utr3p1KJC3_001523-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001523-T1.exon3KJC3_001523-T1.exon3Aspergillus niger KJC3exon
KJC3_001523-T1.exon2KJC3_001523-T1.exon2Aspergillus niger KJC3exon
KJC3_001523-T1.exon1KJC3_001523-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR011333
DBxrefInterPro:IPR000210
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:4065209..4066793 -
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