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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:4109504..4110973- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001532-T1 ID=KJC3_001532-T1|Name=KJC3_001532-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1470bp|location=Sequence derived from alignment at ch1:4109504..4110973- (Aspergillus niger KJC3)
ATGACATACCCTTATCTTATCACGGACCATGTTATGGATGCACAATTCAT
GAGAGAATATCCTCGAGCCACAGCCAGCCAAGATACTCCGCTAAAACTCT
GCATCAAACAATATACCCCCATAGACAACCCTGATCCTAAGAATGGTGAC
CTTACAATTGTTGCTGCGCACGGTACTGGCTTTGCTAAGGTAAAGTGCCG
GGCTCTGGTCATGCCGGAATAACTACTGAGATGTCCACAGGAACTCTATG
AGCCCCTGTGGGAAGACCTTTATGCCAGGAGCAAAAAGGAAGGATTTAAG
ATCGGCTCGATTTGGATTGCCGATGCCACAAATCAAGGTGTCAGCGGTAT
CATTAACGAAGCCGGTTTGGGTAATGACCGTGAGTGATAGGACCTGATAT
TTTCAAGGGCGTTGGTGGGTGGCTAACTCGAAGCAGCGTCGGCGTTCGAT
CATAGTCGGGACCTACTTCTCCTGATGAATCATTTCCGTCACAAGATGAC
CCGGCCTATTATGGGAGTCGGGCATAGTTTGGGTGCAACACAACTGTTAG
TTTTACACCAATCCCAGGGTGCGATGGCTGCTAATGCGAGCACCAACAGC
GTTTTCCTTTCTCTGATGCATCCCCGGATACTCCAATCCCTTATGCTCAT
CGAGCCTTACATTATCGAGAAAAACACTGACGCAGACGCTCCGCTTCTTG
TTCACCTCACCAAGCACAAGCGAGATGTTTGGCCTTCACGGGCCGCAGCG
GAAGAGAAAGCTCGGCAATATTTGCGGTCGTGGGATCCGCGGGTCCTCGA
ACGCTGGTTCCAGTGGGGCTATCGGGAACTTCCTACAGCCCTCTATCCCA
AGGCCGGCGCGCATGACTCCGAGACGCCAGTTACTTTGACCACAACCAAA
TTCCAGGAGGCAATGATCTATGCCCGTGCGAACCCAAACCGGCATAAGGA
ACTGGGGTTACATACTGAAAACAATGGCGATCGTCTTACAGGGCCCCCTC
ATGATCCGCTGTTCTTTCCTGACGTGATGGCCGGCTTGCCACCTGGCCAA
CAGGCATACCGGCCTGAACCCATTGTGGCTGGAAAATTGCTGCCACACCT
TCGCCCTTCCGCGCTATTTCTTAGCGGTGCATCGAGCCCGTTATTTAAGT
CCGGACTTCATACGACCATGGCAGAAAGAACTGGGAGTAGTATTGGAGGA
AGTGGAGGTGTGCGGTACGATCGCGTCCGACATTTGTGGGTTGAGGGCGC
TGGTCATGCGCTGCCTCTGGAGAGGGTGGATTTGACCGCCAGCACATTAG
CAGGATGGATACAGACAGAAATGGAGCGATGGAGCACTGATGAGCGTCGT
ATTGCTGCAGGATGGGAAGATTTGTCGCCGGGAGAGAGGTCTCGGTATAC
CAAGGAGTGGGAGAGAGTGATGGCAGACTCATTGGCCTTCCTGCGCAATA
CAAAAGGTGCTAAATTATAG back to topCoding sequence (CDS) from alignment at ch1:4109504..4110973- >KJC3_001532-T1 ID=KJC3_001532-T1|Name=KJC3_001532-T1|organism=Aspergillus niger KJC3|type=CDS|length=5232bp|location=Sequence derived from alignment at ch1:4109504..4110973- (Aspergillus niger KJC3)
CGTTTTCCTTTCTCTGATGCATCCCCGGATACTCCAATCCCTTATGCTCA
TCGAGCCTTACATTATCGAGAAAAACACTGACGCAGACGCTCCGCTTCTT
GTTCACCTCACCAAGCACAAGCGAGATGTTTGGCCTTCACGGGCCGCAGC
GGAAGAGAAAGCTCGGCAATATTTGCGGTCGTGGGATCCGCGGGTCCTCG
AACGCTGGTTCCAGTGGGGCTATCGGGAACTTCCTACAGCCCTCTATCCC
AAGGCCGGCGCGCATGACTCCGAGACGCCAGTTACTTTGACCACAACCAA
ATTCCAGGAGGCAATGATCTATGCCCGTGCGAACCCAAACCGGCATAAGG
AACTGGGGTTACATACTGAAAACAATGGCGATCGTCTTACAGGGCCCCCT
CATGATCCGCTGTTCTTTCCTGACGTGATGGCCGGCTTGCCACCTGGCCA
ACAGGCATACCGGCCTGAACCCATTGTGGCTGGAAAATTGCTGCCACACC
TTCGCCCTTCCGCGCTATTTCTTAGCGGTGCATCGAGCCCGTTATTTAAG
TCCGGACTTCATACGACCATGGCAGAAAGAACTGGGAGTAGTATTGGAGG
AAGTGGAGGTGTGCGGTACGATCGCGTCCGACATTTGTGGGTTGAGGGCG
CTGGTCATGCGCTGCCTCTGGAGAGGGTGGATTTGACCGCCAGCACATTA
GCAGGATGGATACAGACAGAAATGGAGCGATGGAGCACTGATGAGCGTCG
TATTGCTGCAGGATGGGAAGATTTGTCGCCGGGAGAGAGGTCTCGGTATA
CCAAGGAGTGGGAGAGAGTGATGGCAGACTCATTGGCCTTCCTGCGCAAT
ACAAAAGGTGCTAAATTATAGCGTCGGCGTTCGATCATAGTCGGGACCTA
CTTCTCCTGATGAATCATTTCCGTCACAAGATGACCCGGCCTATTATGGG
AGTCGGGCATAGTTTGGGTGCAACACAACTGAACTCTATGAGCCCCTGTG
GGAAGACCTTTATGCCAGGAGCAAAAAGGAAGGATTTAAGATCGGCTCGA
TTTGGATTGCCGATGCCACAAATCAAGGTGTCAGCGGTATCATTAACGAA
GCCGGTTTGGGTAATGACCATGACATACCCTTATCTTATCACGGACCATG
TTATGGATGCACAATTCATGAGAGAATATCCTCGAGCCACAGCCAGCCAA
GATACTCCGCTAAAACTCTGCATCAAACAATATACCCCCATAGACAACCC
TGATCCTAAGAATGGTGACCTTACAATTGTTGCTGCGCACGGTACTGGCT
TTGCTAAGCGTTTTCCTTTCTCTGATGCATCCCCGGATACTCCAATCCCT
TATGCTCATCGAGCCTTACATTATCGAGAAAAACACTGACGCAGACGCTC
CGCTTCTTGTTCACCTCACCAAGCACAAGCGAGATGTTTGGCCTTCACGG
GCCGCAGCGGAAGAGAAAGCTCGGCAATATTTGCGGTCGTGGGATCCGCG
GGTCCTCGAACGCTGGTTCCAGTGGGGCTATCGGGAACTTCCTACAGCCC
TCTATCCCAAGGCCGGCGCGCATGACTCCGAGACGCCAGTTACTTTGACC
ACAACCAAATTCCAGGAGGCAATGATCTATGCCCGTGCGAACCCAAACCG
GCATAAGGAACTGGGGTTACATACTGAAAACAATGGCGATCGTCTTACAG
GGCCCCCTCATGATCCGCTGTTCTTTCCTGACGTGATGGCCGGCTTGCCA
CCTGGCCAACAGGCATACCGGCCTGAACCCATTGTGGCTGGAAAATTGCT
GCCACACCTTCGCCCTTCCGCGCTATTTCTTAGCGGTGCATCGAGCCCGT
TATTTAAGTCCGGACTTCATACGACCATGGCAGAAAGAACTGGGAGTAGT
ATTGGAGGAAGTGGAGGTGTGCGGTACGATCGCGTCCGACATTTGTGGGT
TGAGGGCGCTGGTCATGCGCTGCCTCTGGAGAGGGTGGATTTGACCGCCA
GCACATTAGCAGGATGGATACAGACAGAAATGGAGCGATGGAGCACTGAT
GAGCGTCGTATTGCTGCAGGATGGGAAGATTTGTCGCCGGGAGAGAGGTC
TCGGTATACCAAGGAGTGGGAGAGAGTGATGGCAGACTCATTGGCCTTCC
TGCGCAATACAAAAGGTGCTAAATTATAGCGTCGGCGTTCGATCATAGTC
GGGACCTACTTCTCCTGATGAATCATTTCCGTCACAAGATGACCCGGCCT
ATTATGGGAGTCGGGCATAGTTTGGGTGCAACACAACTGAACTCTATGAG
CCCCTGTGGGAAGACCTTTATGCCAGGAGCAAAAAGGAAGGATTTAAGAT
CGGCTCGATTTGGATTGCCGATGCCACAAATCAAGGTGTCAGCGGTATCA
TTAACGAAGCCGGTTTGGGTAATGACCATGACATACCCTTATCTTATCAC
GGACCATGTTATGGATGCACAATTCATGAGAGAATATCCTCGAGCCACAG
CCAGCCAAGATACTCCGCTAAAACTCTGCATCAAACAATATACCCCCATA
GACAACCCTGATCCTAAGAATGGTGACCTTACAATTGTTGCTGCGCACGG
TACTGGCTTTGCTAAGCGTTTTCCTTTCTCTGATGCATCCCCGGATACTC
CAATCCCTTATGCTCATCGAGCCTTACATTATCGAGAAAAACACTGACGC
AGACGCTCCGCTTCTTGTTCACCTCACCAAGCACAAGCGAGATGTTTGGC
CTTCACGGGCCGCAGCGGAAGAGAAAGCTCGGCAATATTTGCGGTCGTGG
GATCCGCGGGTCCTCGAACGCTGGTTCCAGTGGGGCTATCGGGAACTTCC
TACAGCCCTCTATCCCAAGGCCGGCGCGCATGACTCCGAGACGCCAGTTA
CTTTGACCACAACCAAATTCCAGGAGGCAATGATCTATGCCCGTGCGAAC
CCAAACCGGCATAAGGAACTGGGGTTACATACTGAAAACAATGGCGATCG
TCTTACAGGGCCCCCTCATGATCCGCTGTTCTTTCCTGACGTGATGGCCG
GCTTGCCACCTGGCCAACAGGCATACCGGCCTGAACCCATTGTGGCTGGA
AAATTGCTGCCACACCTTCGCCCTTCCGCGCTATTTCTTAGCGGTGCATC
GAGCCCGTTATTTAAGTCCGGACTTCATACGACCATGGCAGAAAGAACTG
GGAGTAGTATTGGAGGAAGTGGAGGTGTGCGGTACGATCGCGTCCGACAT
TTGTGGGTTGAGGGCGCTGGTCATGCGCTGCCTCTGGAGAGGGTGGATTT
GACCGCCAGCACATTAGCAGGATGGATACAGACAGAAATGGAGCGATGGA
GCACTGATGAGCGTCGTATTGCTGCAGGATGGGAAGATTTGTCGCCGGGA
GAGAGGTCTCGGTATACCAAGGAGTGGGAGAGAGTGATGGCAGACTCATT
GGCCTTCCTGCGCAATACAAAAGGTGCTAAATTATAGCGTCGGCGTTCGA
TCATAGTCGGGACCTACTTCTCCTGATGAATCATTTCCGTCACAAGATGA
CCCGGCCTATTATGGGAGTCGGGCATAGTTTGGGTGCAACACAACTGAAC
TCTATGAGCCCCTGTGGGAAGACCTTTATGCCAGGAGCAAAAAGGAAGGA
TTTAAGATCGGCTCGATTTGGATTGCCGATGCCACAAATCAAGGTGTCAG
CGGTATCATTAACGAAGCCGGTTTGGGTAATGACCATGACATACCCTTAT
CTTATCACGGACCATGTTATGGATGCACAATTCATGAGAGAATATCCTCG
AGCCACAGCCAGCCAAGATACTCCGCTAAAACTCTGCATCAAACAATATA
CCCCCATAGACAACCCTGATCCTAAGAATGGTGACCTTACAATTGTTGCT
GCGCACGGTACTGGCTTTGCTAAGCGTTTTCCTTTCTCTGATGCATCCCC
GGATACTCCAATCCCTTATGCTCATCGAGCCTTACATTATCGAGAAAAAC
ACTGACGCAGACGCTCCGCTTCTTGTTCACCTCACCAAGCACAAGCGAGA
TGTTTGGCCTTCACGGGCCGCAGCGGAAGAGAAAGCTCGGCAATATTTGC
GGTCGTGGGATCCGCGGGTCCTCGAACGCTGGTTCCAGTGGGGCTATCGG
GAACTTCCTACAGCCCTCTATCCCAAGGCCGGCGCGCATGACTCCGAGAC
GCCAGTTACTTTGACCACAACCAAATTCCAGGAGGCAATGATCTATGCCC
GTGCGAACCCAAACCGGCATAAGGAACTGGGGTTACATACTGAAAACAAT
GGCGATCGTCTTACAGGGCCCCCTCATGATCCGCTGTTCTTTCCTGACGT
GATGGCCGGCTTGCCACCTGGCCAACAGGCATACCGGCCTGAACCCATTG
TGGCTGGAAAATTGCTGCCACACCTTCGCCCTTCCGCGCTATTTCTTAGC
GGTGCATCGAGCCCGTTATTTAAGTCCGGACTTCATACGACCATGGCAGA
AAGAACTGGGAGTAGTATTGGAGGAAGTGGAGGTGTGCGGTACGATCGCG
TCCGACATTTGTGGGTTGAGGGCGCTGGTCATGCGCTGCCTCTGGAGAGG
GTGGATTTGACCGCCAGCACATTAGCAGGATGGATACAGACAGAAATGGA
GCGATGGAGCACTGATGAGCGTCGTATTGCTGCAGGATGGGAAGATTTGT
CGCCGGGAGAGAGGTCTCGGTATACCAAGGAGTGGGAGAGAGTGATGGCA
GACTCATTGGCCTTCCTGCGCAATACAAAAGGTGCTAAATTATAGCGTCG
GCGTTCGATCATAGTCGGGACCTACTTCTCCTGATGAATCATTTCCGTCA
CAAGATGACCCGGCCTATTATGGGAGTCGGGCATAGTTTGGGTGCAACAC
AACTGAACTCTATGAGCCCCTGTGGGAAGACCTTTATGCCAGGAGCAAAA
AGGAAGGATTTAAGATCGGCTCGATTTGGATTGCCGATGCCACAAATCAA
GGTGTCAGCGGTATCATTAACGAAGCCGGTTTGGGTAATGACCATGACAT
ACCCTTATCTTATCACGGACCATGTTATGGATGCACAATTCATGAGAGAA
TATCCTCGAGCCACAGCCAGCCAAGATACTCCGCTAAAACTCTGCATCAA
ACAATATACCCCCATAGACAACCCTGATCCTAAGAATGGTGACCTTACAA
TTGTTGCTGCGCACGGTACTGGCTTTGCTAAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029058 |
| DBxref | InterPro:IPR000073 |
| DBxref | PFAM:PF12697 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:4109504..4110973 - |
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