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KJC3_001538-T1, KJC3_001538-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001538-T1
Unique NameKJC3_001538-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:4123631..4125185+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001538-T1 ID=KJC3_001538-T1|Name=KJC3_001538-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1555bp|location=Sequence derived from alignment at ch1:4123631..4125185+ (Aspergillus niger KJC3)
CCTGGATTTGATTCCTCTGAAAGGTTTGTAATTATTGATATTGATCCAAA
TGATTGATAAACACTGAAATTGGTGCCATTATATAATTCCCATTTTCGAA
TCATCTCGTACACCAAATAACATGCCCCCCCCTGTTGGTAGCCCGATAGC
CTATTCGGATGTTGCCTGACACGATCCGGATCTGCAGGGCGGTATTTATT
TGGTTACTACTCCATTCAACCGTCTGATCTGGAAGAGTCTAAAAATGTGT
ATATTGGTGGTTGTGGCCTGTTCCTGGTATGTGGTGACATCATCCCAATA
GGCTATCCGGGACTGTCCCAAAAGGGCAATATCCGAAATACCCGACTCAC
ATACAGCATATCAATCCCGCATATATATCGGCTTGCCTTCGAAAAGACCT
ACTCATTGCTCCAATTTATCAGTTTCACATGCATTCAACTTCACGTTCAA
TAAGTATGACGCCCACAACAATGCGTCAACTCCTCCAGCCTTCCGCCGAA
GTCGCCACAAGTGGACTAACCCTCACCACAAGTCCACTTCCCACCCCAGA
TACAACAAAAGGCGAACACCTCATCCGCGTGCATGCTTGCTCCCCCTGCT
CCGGGGAATTATTATGGCCCAAGAACTTCCCTCCACCGAACTCCCGGGCA
CTCGTCCCCTGCCCGGATATGGCTGGGACTGTCATCTCTGCACCACTAGA
CTCCCCGTATCAACCGGGAGACGAGGTCTACGCCCGCACCAATTACGTCC
GTCCCGCTAATGCTCGGGACTACACCATAGCAGTGACCGATGAATTGGCC
CGGAAGCCGAAGACCTTGAGTTGGGTGGAAGCGGCCGCCGTGCCTGTTTC
CGCCCAGACGGCGTGGCAGATTCTCTTCGTCCATGCGGGTGTCGTCCCGA
CTACTACCCCCGATGGGAGTGATGTAAGCTTTGAAGCTGCTAAAGAGGCA
TGGGCGGGAAAGCGGATCCTTGTCACCGCTGCATCAGGCGGCGTGGGGAT
CTGGGTCGTCCAGCTAGCGAGACTTCTCGGGATTGAAGTGGTCGGCACCT
GTGGGAGCGAAGAGAACGCCGCGCTAGTCAAGTCCCTAGGCGCAAGCGAG
GTACTAAACTACCGGACAACGGACTTTCGATCATGGGGAGCGGAATTAGA
CGGTCGTCGCAAGGTCGACATCGTGGTCGATTGTATTGGTCGGCAGGCGT
TGCAGGACGCATGGTGGACGGTGAAGGAGGACGGCACCGTACTGAGCATT
TATGCGCCGCCTGGAAGTACTCGTCCGCGAGGATGTCAGGTCAACGCAAA
TGATGTGTTCTTTATCATGGCGCCTAGTTCGCGGCAGTTGGAGGCGATTA
CTCGGCTGATTGAGGATGGAAAATGTCGTCCGTTGGTGGATAGTGTGTGG
CCGTTGGAGCAATTCCTTTCGGCATTTAGTAGGTTGGATGAGGGTCATAC
GAGGGGAAAGATAGTGTTTGATATCAGGCTGAATCAGTAGAGTTTCTCTA
CTGTCGTTGAACATGCGCTTTTAAATGCGTTCTCTTCTCCTTATCGTTTA
ATGGC
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Coding sequence (CDS) from alignment at ch1:4123631..4125185+

>KJC3_001538-T1 ID=KJC3_001538-T1|Name=KJC3_001538-T1|organism=Aspergillus niger KJC3|type=CDS|length=1062bp|location=Sequence derived from alignment at ch1:4123631..4125185+ (Aspergillus niger KJC3)
ATGCATTCAACTTCACGTTCAATAAGTATGACGCCCACAACAATGCGTCA
ACTCCTCCAGCCTTCCGCCGAAGTCGCCACAAGTGGACTAACCCTCACCA
CAAGTCCACTTCCCACCCCAGATACAACAAAAGGCGAACACCTCATCCGC
GTGCATGCTTGCTCCCCCTGCTCCGGGGAATTATTATGGCCCAAGAACTT
CCCTCCACCGAACTCCCGGGCACTCGTCCCCTGCCCGGATATGGCTGGGA
CTGTCATCTCTGCACCACTAGACTCCCCGTATCAACCGGGAGACGAGGTC
TACGCCCGCACCAATTACGTCCGTCCCGCTAATGCTCGGGACTACACCAT
AGCAGTGACCGATGAATTGGCCCGGAAGCCGAAGACCTTGAGTTGGGTGG
AAGCGGCCGCCGTGCCTGTTTCCGCCCAGACGGCGTGGCAGATTCTCTTC
GTCCATGCGGGTGTCGTCCCGACTACTACCCCCGATGGGAGTGATGTAAG
CTTTGAAGCTGCTAAAGAGGCATGGGCGGGAAAGCGGATCCTTGTCACCG
CTGCATCAGGCGGCGTGGGGATCTGGGTCGTCCAGCTAGCGAGACTTCTC
GGGATTGAAGTGGTCGGCACCTGTGGGAGCGAAGAGAACGCCGCGCTAGT
CAAGTCCCTAGGCGCAAGCGAGGTACTAAACTACCGGACAACGGACTTTC
GATCATGGGGAGCGGAATTAGACGGTCGTCGCAAGGTCGACATCGTGGTC
GATTGTATTGGTCGGCAGGCGTTGCAGGACGCATGGTGGACGGTGAAGGA
GGACGGCACCGTACTGAGCATTTATGCGCCGCCTGGAAGTACTCGTCCGC
GAGGATGTCAGGTCAACGCAAATGATGTGTTCTTTATCATGGCGCCTAGT
TCGCGGCAGTTGGAGGCGATTACTCGGCTGATTGAGGATGGAAAATGTCG
TCCGTTGGTGGATAGTGTGTGGCCGTTGGAGCAATTCCTTTCGGCATTTA
GTAGGTTGGATGAGGGTCATACGAGGGGAAAGATAGTGTTTGATATCAGG
CTGAATCAGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001538KJC3_001538Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001538-T1.utr5p1KJC3_001538-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001538-T1.exon1KJC3_001538-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001538-T1.cdsKJC3_001538-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001538-T1.utr3p1KJC3_001538-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001538-T1KJC3_001538-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR011032
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002364
DBxrefInterPro:IPR020843
DBxrefPFAM:PF13602
DBxrefPFAM:PF00107
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:4123631..4125185 +
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