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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:19822..21378- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001544-T1 ID=KJC3_001544-T1|Name=KJC3_001544-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1557bp|location=Sequence derived from alignment at ch2:19822..21378- (Aspergillus niger KJC3)
GTTTATAAATCTGCCCAGATCCCGCTATCTGTTGCCTTGTCGATCTGGAA
TGATTGATAGACCTGGAAGTACTATACCATGGATCTCACCCCTCCAGTCG
GCTTGGATCTGACGGAATCCAAGCGTCCGGAACTGTATGGAGCCTACTCC
GTCACCTATGCCCTGGCTCTCCTGGCCTTTGGTCTCCGCATCGTGTCGCG
CACGCTGATCTCCAAAGCAGGTCTATGGTGGGATGATTATCTGGTCTGCA
TGGCGATGGTGTGTTTTCCCCTCGCTCTTAGCCTTCCCTTTGCGTATCAT
GTTTCATGCTTCAGCCCACCCCCCCCCCCCCCCTCCAATCCCCACTGAGC
AGGATGCAAGCCACTAACAAGACCTAAACAGCTCACAGCAACAGCCAATT
TCGCCACCATGATCGACTGGGTCAATCACGGCGTAGGGCAGCACATCTAC
TTATATGGAATCCAGGGTCTCCATCACTTCCTCTTGAACCTCTTCATCGT
CGAGATTTTGTACACGCTGTCGATCTGTTTCACCAAATATTCAATCCTGA
TGTTCTACTGGCGCATCTTCGGCATGAGCAACATCCGGTACCCAATTTAC
CTCATTGCTTTTGTCGTGACGGGATGGGGCTTAGGGGTTATTTTAACAAC
CATCTTCCAGTGCCTTCCGGTGCATGGATTCTGGGACAAGACCATCCCCT
CGCACTGCGGCGTGAATGTCAACAACTTTTTCATCGGCAATGCCGTCCCC
AATATCCTCACCGACTGGGCGCTCCTGACCCTCCCGCTGCCTTATGTTTG
GAAGCTGCAGCGCAGTGCCTCGCAGAAGTTAGCTCTGACTGGGGTGTTTA
TTATGGGTGGATTGTACGTTCATTGTTATTCCTATTACCCTTTCCACCCC
CAATAGTTGCAGTCACGTCGAACTAACCGGATCGGGCACACCAGCATTTG
CATCATCTCAATTGTGCGTCTCATCATCATGCTCAATGCATACAAGGTAC
CCTCGCTGGACGAAACGTGGGTCTTTGTCGGTCCTTCCAAATGGACGGCG
GTGGAGACAAATATCGGGATCGTGTCTGGTGTGTTGCTGATTCAACCGTA
CGCCATGCATTGTCTACGGACTAATAAAATCAAATAGCATGTCTACCCTC
GCTCCGACCGGTTATCACACTCATAAAGAAGACTGGCTCCAGCACGAAGG
GCGTTTCCCAAGACGGGAGTTTGCAGGAAAGTTACAAATGTTACAGTACT
CTGCATTCGAGCGGCCAGCGCGGCAAGCGCGGCAAACGACTTGGAGAGGA
TGAGACAGCCCTGACGCTCACGGCTATCTCAGTGCAGACCACGCTTGACG
TGGAATCATCGTATTCTGCGGTCGCTCGGTAGGGGATCAGGGATTATGGT
AACTGCTTCCAGAGTTCCTAGCTAGATTTGTAGTAAGGGATAAACACTAC
GATAGTAGAGGAAGGCACTAATGCCAAAGAATACTGACGAGGGAGGATGA
ATCGAACGGTGCCGCTCAATCTAATACTATACTGAACCCTTTGAATATTA
ATCCGGT back to topCoding sequence (CDS) from alignment at ch2:19822..21378- >KJC3_001544-T1 ID=KJC3_001544-T1|Name=KJC3_001544-T1|organism=Aspergillus niger KJC3|type=CDS|length=4164bp|location=Sequence derived from alignment at ch2:19822..21378- (Aspergillus niger KJC3)
CATGTCTACCCTCGCTCCGACCGGTTATCACACTCATAAAGAAGACTGGC
TCCAGCACGAAGGGCGTTTCCCAAGACGGGAGTTTGCAGGAAAGTTACAA
ATGTTACAGTACTCTGCATTCGAGCGGCCAGCGCGGCAAGCGCGGCAAAC
GACTTGGAGAGGATGAGACAGCCCTGACGCTCACGGCTATCTCAGTGCAG
ACCACGCTTGACGTGGAATCATCGTATTCTGCGGTCGCTCGGTAGCATTT
GCATCATCTCAATTGTGCGTCTCATCATCATGCTCAATGCATACAAGGTA
CCCTCGCTGGACGAAACGTGGGTCTTTGTCGGTCCTTCCAAATGGACGGC
GGTGGAGACAAATATCGGGATCGTGTCTGCTCACAGCAACAGCCAATTTC
GCCACCATGATCGACTGGGTCAATCACGGCGTAGGGCAGCACATCTACTT
ATATGGAATCCAGGGTCTCCATCACTTCCTCTTGAACCTCTTCATCGTCG
AGATTTTGTACACGCTGTCGATCTGTTTCACCAAATATTCAATCCTGATG
TTCTACTGGCGCATCTTCGGCATGAGCAACATCCGGTACCCAATTTACCT
CATTGCTTTTGTCGTGACGGGATGGGGCTTAGGGGTTATTTTAACAACCA
TCTTCCAGTGCCTTCCGGTGCATGGATTCTGGGACAAGACCATCCCCTCG
CACTGCGGCGTGAATGTCAACAACTTTTTCATCGGCAATGCCGTCCCCAA
TATCCTCACCGACTGGGCGCTCCTGACCCTCCCGCTGCCTTATGTTTGGA
AGCTGCAGCGCAGTGCCTCGCAGAAGTTAGCTCTGACTGGGGTGTTTATT
ATGGGTGGATTATGGATCTCACCCCTCCAGTCGGCTTGGATCTGACGGAA
TCCAAGCGTCCGGAACTGTATGGAGCCTACTCCGTCACCTATGCCCTGGC
TCTCCTGGCCTTTGGTCTCCGCATCGTGTCGCGCACGCTGATCTCCAAAG
CAGGTCTATGGTGGGATGATTATCTGGTCTGCATGGCGATGCATGTCTAC
CCTCGCTCCGACCGGTTATCACACTCATAAAGAAGACTGGCTCCAGCACG
AAGGGCGTTTCCCAAGACGGGAGTTTGCAGGAAAGTTACAAATGTTACAG
TACTCTGCATTCGAGCGGCCAGCGCGGCAAGCGCGGCAAACGACTTGGAG
AGGATGAGACAGCCCTGACGCTCACGGCTATCTCAGTGCAGACCACGCTT
GACGTGGAATCATCGTATTCTGCGGTCGCTCGGTAGCATTTGCATCATCT
CAATTGTGCGTCTCATCATCATGCTCAATGCATACAAGGTACCCTCGCTG
GACGAAACGTGGGTCTTTGTCGGTCCTTCCAAATGGACGGCGGTGGAGAC
AAATATCGGGATCGTGTCTGCTCACAGCAACAGCCAATTTCGCCACCATG
ATCGACTGGGTCAATCACGGCGTAGGGCAGCACATCTACTTATATGGAAT
CCAGGGTCTCCATCACTTCCTCTTGAACCTCTTCATCGTCGAGATTTTGT
ACACGCTGTCGATCTGTTTCACCAAATATTCAATCCTGATGTTCTACTGG
CGCATCTTCGGCATGAGCAACATCCGGTACCCAATTTACCTCATTGCTTT
TGTCGTGACGGGATGGGGCTTAGGGGTTATTTTAACAACCATCTTCCAGT
GCCTTCCGGTGCATGGATTCTGGGACAAGACCATCCCCTCGCACTGCGGC
GTGAATGTCAACAACTTTTTCATCGGCAATGCCGTCCCCAATATCCTCAC
CGACTGGGCGCTCCTGACCCTCCCGCTGCCTTATGTTTGGAAGCTGCAGC
GCAGTGCCTCGCAGAAGTTAGCTCTGACTGGGGTGTTTATTATGGGTGGA
TTATGGATCTCACCCCTCCAGTCGGCTTGGATCTGACGGAATCCAAGCGT
CCGGAACTGTATGGAGCCTACTCCGTCACCTATGCCCTGGCTCTCCTGGC
CTTTGGTCTCCGCATCGTGTCGCGCACGCTGATCTCCAAAGCAGGTCTAT
GGTGGGATGATTATCTGGTCTGCATGGCGATGCATGTCTACCCTCGCTCC
GACCGGTTATCACACTCATAAAGAAGACTGGCTCCAGCACGAAGGGCGTT
TCCCAAGACGGGAGTTTGCAGGAAAGTTACAAATGTTACAGTACTCTGCA
TTCGAGCGGCCAGCGCGGCAAGCGCGGCAAACGACTTGGAGAGGATGAGA
CAGCCCTGACGCTCACGGCTATCTCAGTGCAGACCACGCTTGACGTGGAA
TCATCGTATTCTGCGGTCGCTCGGTAGCATTTGCATCATCTCAATTGTGC
GTCTCATCATCATGCTCAATGCATACAAGGTACCCTCGCTGGACGAAACG
TGGGTCTTTGTCGGTCCTTCCAAATGGACGGCGGTGGAGACAAATATCGG
GATCGTGTCTGCTCACAGCAACAGCCAATTTCGCCACCATGATCGACTGG
GTCAATCACGGCGTAGGGCAGCACATCTACTTATATGGAATCCAGGGTCT
CCATCACTTCCTCTTGAACCTCTTCATCGTCGAGATTTTGTACACGCTGT
CGATCTGTTTCACCAAATATTCAATCCTGATGTTCTACTGGCGCATCTTC
GGCATGAGCAACATCCGGTACCCAATTTACCTCATTGCTTTTGTCGTGAC
GGGATGGGGCTTAGGGGTTATTTTAACAACCATCTTCCAGTGCCTTCCGG
TGCATGGATTCTGGGACAAGACCATCCCCTCGCACTGCGGCGTGAATGTC
AACAACTTTTTCATCGGCAATGCCGTCCCCAATATCCTCACCGACTGGGC
GCTCCTGACCCTCCCGCTGCCTTATGTTTGGAAGCTGCAGCGCAGTGCCT
CGCAGAAGTTAGCTCTGACTGGGGTGTTTATTATGGGTGGATTATGGATC
TCACCCCTCCAGTCGGCTTGGATCTGACGGAATCCAAGCGTCCGGAACTG
TATGGAGCCTACTCCGTCACCTATGCCCTGGCTCTCCTGGCCTTTGGTCT
CCGCATCGTGTCGCGCACGCTGATCTCCAAAGCAGGTCTATGGTGGGATG
ATTATCTGGTCTGCATGGCGATGCATGTCTACCCTCGCTCCGACCGGTTA
TCACACTCATAAAGAAGACTGGCTCCAGCACGAAGGGCGTTTCCCAAGAC
GGGAGTTTGCAGGAAAGTTACAAATGTTACAGTACTCTGCATTCGAGCGG
CCAGCGCGGCAAGCGCGGCAAACGACTTGGAGAGGATGAGACAGCCCTGA
CGCTCACGGCTATCTCAGTGCAGACCACGCTTGACGTGGAATCATCGTAT
TCTGCGGTCGCTCGGTAGCATTTGCATCATCTCAATTGTGCGTCTCATCA
TCATGCTCAATGCATACAAGGTACCCTCGCTGGACGAAACGTGGGTCTTT
GTCGGTCCTTCCAAATGGACGGCGGTGGAGACAAATATCGGGATCGTGTC
TGCTCACAGCAACAGCCAATTTCGCCACCATGATCGACTGGGTCAATCAC
GGCGTAGGGCAGCACATCTACTTATATGGAATCCAGGGTCTCCATCACTT
CCTCTTGAACCTCTTCATCGTCGAGATTTTGTACACGCTGTCGATCTGTT
TCACCAAATATTCAATCCTGATGTTCTACTGGCGCATCTTCGGCATGAGC
AACATCCGGTACCCAATTTACCTCATTGCTTTTGTCGTGACGGGATGGGG
CTTAGGGGTTATTTTAACAACCATCTTCCAGTGCCTTCCGGTGCATGGAT
TCTGGGACAAGACCATCCCCTCGCACTGCGGCGTGAATGTCAACAACTTT
TTCATCGGCAATGCCGTCCCCAATATCCTCACCGACTGGGCGCTCCTGAC
CCTCCCGCTGCCTTATGTTTGGAAGCTGCAGCGCAGTGCCTCGCAGAAGT
TAGCTCTGACTGGGGTGTTTATTATGGGTGGATTATGGATCTCACCCCTC
CAGTCGGCTTGGATCTGACGGAATCCAAGCGTCCGGAACTGTATGGAGCC
TACTCCGTCACCTATGCCCTGGCTCTCCTGGCCTTTGGTCTCCGCATCGT
GTCGCGCACGCTGATCTCCAAAGCAGGTCTATGGTGGGATGATTATCTGG
TCTGCATGGCGATG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001544-T1.utr3p1 | KJC3_001544-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001544-T1.utr5p1 | KJC3_001544-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:19822..21378 - |
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