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KJC3_001544-T2, KJC3_001544-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001544-T2
Unique NameKJC3_001544-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:19822..21378-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001544-T2 ID=KJC3_001544-T2|Name=KJC3_001544-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1557bp|location=Sequence derived from alignment at ch2:19822..21378- (Aspergillus niger KJC3)
GTTTATAAATCTGCCCAGATCCCGCTATCTGTTGCCTTGTCGATCTGGAA
TGATTGATAGACCTGGAAGTACTATACCATGGATCTCACCCCTCCAGTCG
GCTTGGATCTGACGGAATCCAAGCGTCCGGAACTGTATGGAGCCTACTCC
GTCACCTATGCCCTGGCTCTCCTGGCCTTTGGTCTCCGCATCGTGTCGCG
CACGCTGATCTCCAAAGCAGGTCTATGGTGGGATGATTATCTGGTCTGCA
TGGCGATGGTGTGTTTTCCCCTCGCTCTTAGCCTTCCCTTTGCGTATCAT
GTTTCATGCTTCAGCCCACCCCCCCCCCCCCCCTCCAATCCCCACTGAGC
AGGATGCAAGCCACTAACAAGACCTAAACAGCTCACAGCAACAGCCAATT
TCGCCACCATGATCGACTGGGTCAATCACGGCGTAGGGCAGCACATCTAC
TTATATGGAATCCAGGGTCTCCATCACTTCCTCTTGAACCTCTTCATCGT
CGAGATTTTGTACACGCTGTCGATCTGTTTCACCAAATATTCAATCCTGA
TGTTCTACTGGCGCATCTTCGGCATGAGCAACATCCGGTACCCAATTTAC
CTCATTGCTTTTGTCGTGACGGGATGGGGCTTAGGGGTTATTTTAACAAC
CATCTTCCAGTGCCTTCCGGTGCATGGATTCTGGGACAAGACCATCCCCT
CGCACTGCGGCGTGAATGTCAACAACTTTTTCATCGGCAATGCCGTCCCC
AATATCCTCACCGACTGGGCGCTCCTGACCCTCCCGCTGCCTTATGTTTG
GAAGCTGCAGCGCAGTGCCTCGCAGAAGTTAGCTCTGACTGGGGTGTTTA
TTATGGGTGGATTGTACGTTCATTGTTATTCCTATTACCCTTTCCACCCC
CAATAGTTGCAGTCACGTCGAACTAACCGGATCGGGCACACCAGCATTTG
CATCATCTCAATTGTGCGTCTCATCATCATGCTCAATGCATACAAGGTAC
CCTCGCTGGACGAAACGTGGGTCTTTGTCGGTCCTTCCAAATGGACGGCG
GTGGAGACAAATATCGGGATCGTGTCTGGTGTGTTGCTGATTCAACCGTA
CGCCATGCATTGTCTACGGACTAATAAAATCAAATAGCATGTCTACCCTC
GCTCCGACCGGTTATCACACTCATAAAGAAGACTGGCTCCAGCACGAAGG
GCGTTTCCCAAGACGGGAGTTTGCAGGAAAGTTACAAATGTTACAGTACT
CTGCATTCGAGCGGCCAGCGCGGCAAGCGCGGCAAACGACTTGGAGAGGA
TGAGACAGCCCTGACGCTCACGGCTATCTCAGTGCAGACCACGCTTGACG
TGGAATCATCGTATTCTGCGGTCGCTCGGTAGGGGATCAGGGATTATGGT
AACTGCTTCCAGAGTTCCTAGCTAGATTTGTAGTAAGGGATAAACACTAC
GATAGTAGAGGAAGGCACTAATGCCAAAGAATACTGACGAGGGAGGATGA
ATCGAACGGTGCCGCTCAATCTAATACTATACTGAACCCTTTGAATATTA
ATCCGGT
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Coding sequence (CDS) from alignment at ch2:19822..21378-

>KJC3_001544-T2 ID=KJC3_001544-T2|Name=KJC3_001544-T2|organism=Aspergillus niger KJC3|type=CDS|length=3480bp|location=Sequence derived from alignment at ch2:19822..21378- (Aspergillus niger KJC3)
CATGTCTACCCTCGCTCCGACCGGTTATCACACTCATAAAGAAGACTGGC
TCCAGCACGAAGGGCGTTTCCCAAGACGGGAGTTTGCAGGAAAGTTACAA
ATGTTACAGTACTCTGCATTCGAGCGGCCAGCGCGGCAAGCGCGGCAAAC
GACTTGGAGAGGATGAGACAGCCCTGACGCTCACGGCTATCTCAGTGCAG
ACCACGCTTGACGTGGAATCATCGTATTCTGCGGTCGCTCGGTAGCATTT
GCATCATCTCAATTGTGCGTCTCATCATCATGCTCAATGCATACAAGGTA
CCCTCGCTGGACGAAACGTGGGTCTTTGTCGGTCCTTCCAAATGGACGGC
GGTGGAGACAAATATCGGGATCGTGTCTGCTCACAGCAACAGCCAATTTC
GCCACCATGATCGACTGGGTCAATCACGGCGTAGGGCAGCACATCTACTT
ATATGGAATCCAGGGTCTCCATCACTTCCTCTTGAACCTCTTCATCGTCG
AGATTTTGTACACGCTGTCGATCTGTTTCACCAAATATTCAATCCTGATG
TTCTACTGGCGCATCTTCGGCATGAGCAACATCCGGTACCCAATTTACCT
CATTGCTTTTGTCGTGACGGGATGGGGCTTAGGGGTTATTTTAACAACCA
TCTTCCAGTGCCTTCCGGTGCATGGATTCTGGGACAAGACCATCCCCTCG
CACTGCGGCGTGAATGTCAACAACTTTTTCATCGGCAATGCCGTCCCCAA
TATCCTCACCGACTGGGCGCTCCTGACCCTCCCGCTGCCTTATGTTTGGA
AGCTGCAGCGCAGTGCCTCGCAGAAGTTAGCTCTGACTGGGGTGTTTATT
ATGGGTGGATTATGGCGATGCATGTCTACCCTCGCTCCGACCGGTTATCA
CACTCATAAAGAAGACTGGCTCCAGCACGAAGGGCGTTTCCCAAGACGGG
AGTTTGCAGGAAAGTTACAAATGTTACAGTACTCTGCATTCGAGCGGCCA
GCGCGGCAAGCGCGGCAAACGACTTGGAGAGGATGAGACAGCCCTGACGC
TCACGGCTATCTCAGTGCAGACCACGCTTGACGTGGAATCATCGTATTCT
GCGGTCGCTCGGTAGCATTTGCATCATCTCAATTGTGCGTCTCATCATCA
TGCTCAATGCATACAAGGTACCCTCGCTGGACGAAACGTGGGTCTTTGTC
GGTCCTTCCAAATGGACGGCGGTGGAGACAAATATCGGGATCGTGTCTGC
TCACAGCAACAGCCAATTTCGCCACCATGATCGACTGGGTCAATCACGGC
GTAGGGCAGCACATCTACTTATATGGAATCCAGGGTCTCCATCACTTCCT
CTTGAACCTCTTCATCGTCGAGATTTTGTACACGCTGTCGATCTGTTTCA
CCAAATATTCAATCCTGATGTTCTACTGGCGCATCTTCGGCATGAGCAAC
ATCCGGTACCCAATTTACCTCATTGCTTTTGTCGTGACGGGATGGGGCTT
AGGGGTTATTTTAACAACCATCTTCCAGTGCCTTCCGGTGCATGGATTCT
GGGACAAGACCATCCCCTCGCACTGCGGCGTGAATGTCAACAACTTTTTC
ATCGGCAATGCCGTCCCCAATATCCTCACCGACTGGGCGCTCCTGACCCT
CCCGCTGCCTTATGTTTGGAAGCTGCAGCGCAGTGCCTCGCAGAAGTTAG
CTCTGACTGGGGTGTTTATTATGGGTGGATTATGGCGATGCATGTCTACC
CTCGCTCCGACCGGTTATCACACTCATAAAGAAGACTGGCTCCAGCACGA
AGGGCGTTTCCCAAGACGGGAGTTTGCAGGAAAGTTACAAATGTTACAGT
ACTCTGCATTCGAGCGGCCAGCGCGGCAAGCGCGGCAAACGACTTGGAGA
GGATGAGACAGCCCTGACGCTCACGGCTATCTCAGTGCAGACCACGCTTG
ACGTGGAATCATCGTATTCTGCGGTCGCTCGGTAGCATTTGCATCATCTC
AATTGTGCGTCTCATCATCATGCTCAATGCATACAAGGTACCCTCGCTGG
ACGAAACGTGGGTCTTTGTCGGTCCTTCCAAATGGACGGCGGTGGAGACA
AATATCGGGATCGTGTCTGCTCACAGCAACAGCCAATTTCGCCACCATGA
TCGACTGGGTCAATCACGGCGTAGGGCAGCACATCTACTTATATGGAATC
CAGGGTCTCCATCACTTCCTCTTGAACCTCTTCATCGTCGAGATTTTGTA
CACGCTGTCGATCTGTTTCACCAAATATTCAATCCTGATGTTCTACTGGC
GCATCTTCGGCATGAGCAACATCCGGTACCCAATTTACCTCATTGCTTTT
GTCGTGACGGGATGGGGCTTAGGGGTTATTTTAACAACCATCTTCCAGTG
CCTTCCGGTGCATGGATTCTGGGACAAGACCATCCCCTCGCACTGCGGCG
TGAATGTCAACAACTTTTTCATCGGCAATGCCGTCCCCAATATCCTCACC
GACTGGGCGCTCCTGACCCTCCCGCTGCCTTATGTTTGGAAGCTGCAGCG
CAGTGCCTCGCAGAAGTTAGCTCTGACTGGGGTGTTTATTATGGGTGGAT
TATGGCGATGCATGTCTACCCTCGCTCCGACCGGTTATCACACTCATAAA
GAAGACTGGCTCCAGCACGAAGGGCGTTTCCCAAGACGGGAGTTTGCAGG
AAAGTTACAAATGTTACAGTACTCTGCATTCGAGCGGCCAGCGCGGCAAG
CGCGGCAAACGACTTGGAGAGGATGAGACAGCCCTGACGCTCACGGCTAT
CTCAGTGCAGACCACGCTTGACGTGGAATCATCGTATTCTGCGGTCGCTC
GGTAGCATTTGCATCATCTCAATTGTGCGTCTCATCATCATGCTCAATGC
ATACAAGGTACCCTCGCTGGACGAAACGTGGGTCTTTGTCGGTCCTTCCA
AATGGACGGCGGTGGAGACAAATATCGGGATCGTGTCTGCTCACAGCAAC
AGCCAATTTCGCCACCATGATCGACTGGGTCAATCACGGCGTAGGGCAGC
ACATCTACTTATATGGAATCCAGGGTCTCCATCACTTCCTCTTGAACCTC
TTCATCGTCGAGATTTTGTACACGCTGTCGATCTGTTTCACCAAATATTC
AATCCTGATGTTCTACTGGCGCATCTTCGGCATGAGCAACATCCGGTACC
CAATTTACCTCATTGCTTTTGTCGTGACGGGATGGGGCTTAGGGGTTATT
TTAACAACCATCTTCCAGTGCCTTCCGGTGCATGGATTCTGGGACAAGAC
CATCCCCTCGCACTGCGGCGTGAATGTCAACAACTTTTTCATCGGCAATG
CCGTCCCCAATATCCTCACCGACTGGGCGCTCCTGACCCTCCCGCTGCCT
TATGTTTGGAAGCTGCAGCGCAGTGCCTCGCAGAAGTTAGCTCTGACTGG
GGTGTTTATTATGGGTGGATTATGGCGATG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001544KJC3_001544Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001544-T2KJC3_001544-T2-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001544-T2.cdsKJC3_001544-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001544-T2.utr3p1KJC3_001544-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001544-T2.exon5KJC3_001544-T2.exon5Aspergillus niger KJC3exon
KJC3_001544-T2.exon4KJC3_001544-T2.exon4Aspergillus niger KJC3exon
KJC3_001544-T2.exon3KJC3_001544-T2.exon3Aspergillus niger KJC3exon
KJC3_001544-T2.exon2KJC3_001544-T2.exon2Aspergillus niger KJC3exon
KJC3_001544-T2.exon1KJC3_001544-T2.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001544-T2.utr5p2KJC3_001544-T2.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_001544-T2.utr5p1KJC3_001544-T2.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:19822..21378 -
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