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KJC3_001545-T1, KJC3_001545-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001545-T1
Unique NameKJC3_001545-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:21436..23039+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001545-T1 ID=KJC3_001545-T1|Name=KJC3_001545-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1604bp|location=Sequence derived from alignment at ch2:21436..23039+ (Aspergillus niger KJC3)
CCAGGGTGTGCCGGAGCTCGACAGGGATTCCTTTAGGGGCCGGATCTCAG
GATCCCCCCAGGGACCACAACCGACTGCGCTGCCAGATTTCATTACAAAT
ACTGTCCGTACCCAATCCTAATCACTGTCAATTCCCTCATCTTCAAGCAT
CTCTCCTTGTCTGCACCTCAATCATCTCTTCCCAAAACCCCAGATCCTCA
GAATGACCACTGTCGTCGTAATTCCCGGTGCCTGGCTCACGCCGGACTTC
TACCAGCCTTTCCTAAACGCTCTCAATCTAGCCGGTTACCGCACGCACTT
GGCACGTTATCCCTCGCTCAATCCTTCCAACCCTGCCACAGCGGACTGCC
AAACCGACAGCGACGCCATTCAGCGTGAGCTACGCAATTTGGTCGAGGAT
CAAAACCGGGACGTGGTGCTGTTAATGCACTCGTACGCCGGCATGCCTGG
CGCATCGGCTGCTTGCGGATTGTCCAAGGTGGAACGACGGCAGCAGGGCA
AGTCTGGAGGCATTGTAGGGCTGATTTTCCTGGCGGCCTTTGTGGTTCCT
GAAGGCCACAGTTGCGCCGGTCTTCAGGGTGGACAACTCCCTCCTTGGAT
CCTTCTCGATAAGGTGAGAGTTAACAATGCTGCATCCTGTGTCCTTCTCC
CCTCTTTATCGTGGCCTCGCACACTCACTGACAGCCCATTCCTTCTCCCA
CTGCAGCCCTCCGCGCAACTCAACATCGTCGACGACCCAGTCAGCAATTT
CGCTCCGGAGGTTGACCAGGCACTCCTGGGCGATCTTAATAGCTACTTGA
AACCCCATTCGTCCTTGGCTTTCTTCTCTCCTCAGCCGGTTCCGGCCTGG
ACAGACGTTGCCTACGCCGGACGGCTTGCCTTTATCATCACTGCGGCGGA
CAAGGCGGTGCCCAAGGAGGCGCAACGCTGGATGATTACCAACACCGAAA
AGGAGTTCATCGTCAAGGAGATGGAGTGCAGCCACCTGGCACCGTTTGTG
GATCGCATCCCCGAGACAGTGGGATTGGTCAACGGGCTGCTCCCGGTATT
CCAGACCAAATGAGAGTGGAGAATTTAATGCCTGGTCTTTCACTCGTGTG
TTTTTCCTTTGGTTTCTAGATGCTTGTAGCTAATTCATACGTACAAACAC
AAACTCCAAGCCGCCTTGATCCGCGGGCATCCAGGCCACATCCTCCTCTT
GCAAGCCCCAATCCCGCTGTAGATCCACCTCGCGCACCTGCATGGTCCAT
TCCGTGGCGGTTTCGCTCTGCACCGATTCCCACAGCGCGACGAACGAGTC
GCGATTATGGAAAAACATTGTGCCCCAGGGTCGCACATCCTCGCGGGGTT
GTCGCCGGCCCTGCTGAAATCCCACCACCGTCGTGCCTGGGTGCGACAGC
GCAATGATCCGCCGGATTACCTCCCGCTGATCGGCCAGGTCGAACAGGTG
GATGAATTGATTAGCGATGATCAGGTCCACGCTGCCGCGAAGCGGGGCCA
GAGGCGATGATTCGGCGGTGATATCGAGGGTGCGAAAGTCGCCGGCCACA
AAGTGCGCTGCCATGCGATCACGATCACGGAACAACTCGTAGCCCAGTTC
CCAC
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Coding sequence (CDS) from alignment at ch2:21436..23039+

>KJC3_001545-T1 ID=KJC3_001545-T1|Name=KJC3_001545-T1|organism=Aspergillus niger KJC3|type=CDS|length=1536bp|location=Sequence derived from alignment at ch2:21436..23039+ (Aspergillus niger KJC3)
ATGACCACTGTCGTCGTAATTCCCGGTGCCTGGCTCACGCCGGACTTCTA
CCAGCCTTTCCTAAACGCTCTCAATCTAGCCGGTTACCGCACGCACTTGG
CACGTTATCCCTCGCTCAATCCTTCCAACCCTGCCACAGCGGACTGCCAA
ACCGACAGCGACGCCATTCAGCGTGAGCTACGCAATTTGGTCGAGGATCA
AAACCGGGACGTGGTGCTGTTAATGCACTCGTACGCCGGCATGCCTGGCG
CATCGGCTGCTTGCGGATTGTCCAAGGTGGAACGACGGCAGCAGGGCAAG
TCTGGAGGCATTGTAGGGCTGATTTTCCTGGCGGCCTTTGTGGTTCCTGA
AGGCCACAGTTGCGCCGGTCTTCAGGGTGGACAACTCCCTCCTTGGATCC
TTCTCGATAAGCCCTCCGCGCAACTCAACATCGTCGACGACCCAGTCAGC
AATTTCGCTCCGGAGGTTGACCAGGCACTCCTGGGCGATCTTAATAGCTA
CTTGAAACCCCATTCGTCCTTGGCTTTCTTCTCTCCTCAGCCGGTTCCGG
CCTGGACAGACGTTGCCTACGCCGGACGGCTTGCCTTTATCATCACTGCG
GCGGACAAGGCGGTGCCCAAGGAGGCGCAACGCTGGATGATTACCAACAC
CGAAAAGGAGTTCATCGTCAAGGAGATGGAGTGCAGCCACCTGGCACCGT
TTGTGGATCGCATCCCCGAGACAGTGGGATTGGTCAACGGGCTGCTCCCG
GTATTCCAGACCAAATGAATGACCACTGTCGTCGTAATTCCCGGTGCCTG
GCTCACGCCGGACTTCTACCAGCCTTTCCTAAACGCTCTCAATCTAGCCG
GTTACCGCACGCACTTGGCACGTTATCCCTCGCTCAATCCTTCCAACCCT
GCCACAGCGGACTGCCAAACCGACAGCGACGCCATTCAGCGTGAGCTACG
CAATTTGGTCGAGGATCAAAACCGGGACGTGGTGCTGTTAATGCACTCGT
ACGCCGGCATGCCTGGCGCATCGGCTGCTTGCGGATTGTCCAAGGTGGAA
CGACGGCAGCAGGGCAAGTCTGGAGGCATTGTAGGGCTGATTTTCCTGGC
GGCCTTTGTGGTTCCTGAAGGCCACAGTTGCGCCGGTCTTCAGGGTGGAC
AACTCCCTCCTTGGATCCTTCTCGATAAGCCCTCCGCGCAACTCAACATC
GTCGACGACCCAGTCAGCAATTTCGCTCCGGAGGTTGACCAGGCACTCCT
GGGCGATCTTAATAGCTACTTGAAACCCCATTCGTCCTTGGCTTTCTTCT
CTCCTCAGCCGGTTCCGGCCTGGACAGACGTTGCCTACGCCGGACGGCTT
GCCTTTATCATCACTGCGGCGGACAAGGCGGTGCCCAAGGAGGCGCAACG
CTGGATGATTACCAACACCGAAAAGGAGTTCATCGTCAAGGAGATGGAGT
GCAGCCACCTGGCACCGTTTGTGGATCGCATCCCCGAGACAGTGGGATTG
GTCAACGGGCTGCTCCCGGTATTCCAGACCAAATGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001545KJC3_001545Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001545-T1.utr5p1KJC3_001545-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001545-T1.exon1KJC3_001545-T1.exon1Aspergillus niger KJC3exon
KJC3_001545-T1.exon2KJC3_001545-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001545-T1.cdsKJC3_001545-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001545-T1.utr3p1KJC3_001545-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001545-T1KJC3_001545-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR000073
DBxrefInterPro:IPR029058
DBxrefPFAM:PF12697
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:21436..23039 +
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