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KJC3_001557-T1, KJC3_001557-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001557-T1
Unique NameKJC3_001557-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:55661..57639-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001557-T1 ID=KJC3_001557-T1|Name=KJC3_001557-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1979bp|location=Sequence derived from alignment at ch2:55661..57639- (Aspergillus niger KJC3)
AAACAATGGGGCTTTCTGCGCAAGCCTGAATCCCTCGCTGTATCCCTCTG
GCCCACTCACTCGACTAAGAAAAAATGGTCGGCGTGCCCGGTCAATATGG
CGGGTGTGCGACATGTCGCAGGAGGAAAAAAGGCGTACGTTGAACTCCGA
GCTGTGACTGTCTCATGCTGATAGCCCCGTCTGGGAAACAGTGCGACAGG
AAGACCCCTTTTTGTACCCAGTGCGTTCACGCTAGGCTCGTATGCGAGGG
CTACTCTCGCAACTATTCGGTCTGGATCAACTCGACAGACGGCGAGAATC
GCAAGTACACCAAGTGTACCGGCAGCGTACAATCTCGTAGACGCGGGGCT
CCAGAAATCACCCTGCATGAGTCGCTGGCGAGAAGTACCAGAGAGGTTAC
TTACGTCGGTCTTTATCTGGCAGCGTTCTTACCAAATGGTCGCCTTTTCA
CCCAGGAGGCCGCGCAGATATCCTCTGCGGGGTGGCTAAGACACCTTGAC
AAATTATGTCGGTCTGAGAAAACTCTGCGCTTCATTACCCTTGCTCACGG
GCTGTCAATGCTGGCTACGAGAGACCACGACAGCCAGCTGAAGTTCAAGG
GCGTCCAGGCACACAGCATAGCGCTGCAGGAAATGCGCACAGCCCTGCGG
GATCCACAAAGGGCCTCGGGAGATGGGATCTTGGCCGCTATTCGGCTGTT
CCGCTTTTATGAGGTAAGTTGTGCTTCCTGTGAAGACTGTCAGGTCACTA
ATTCTTGCCAGATTCTCTATGGCGCCGAGTCCCGTGGTTCGGACAAAGAA
AACCCTACCCTCCAAATCAAGGGGTACTACGCCCATACTGACGGTGAAAT
GGCCTTGTTCATGAACAGGGGCTGGCAGAAGGATTGGAGCGAAGCTGGAA
TGTACTTACTCGTAAGCGGCCGGATTGTGTCAGTAAGTTTCCCACCATCG
AATTCCGTCAACGGACTGTCCATATTCATTGGTATATGTGTAGTTCATTC
TAGGCGTCGGACGAAGAAAGCGTTCGCCCTTCAGCGACAACAACTGGATG
TCAGCACCCTGGAAATACAGAACAAAGTCCCTACTTCATGGTCTGACTGA
CATTCTGGTTCAAGTTCCGGGTTTATTGGAAGAGCTGGACACCATTAGAG
CATCTCCTATTGCGGAGCGTAGTCTACGTGGCTGGGAAAACTTGCTTGGC
GAATGTATCCGCATCGAGCAAATGTTACTTGCCTGGAAGGAAACCATGGG
AGACAAACTGCAGACCTTTGATTACACCCAATCGGGGAATTCCCCCCAGA
TGCCACAGGTGGACAGGGACTTTGCATTGTTGCACATGAGCTGTCTCTAT
TGGAGCTGCTGTATCCTCCTATACACGACAATCCATATGGCTGCGAATGA
GGCGCATCAGGGTCCAAGCTTCACATACTTCTTGACAATTCCCTTTTCTT
CTCCAGGATGCCCCAACTATCGCGATGAGAGGAACCCGACTTTGCACGCC
CACAGGATAATCTACACCATACCTTTATCACATGGGCCTTATGCCGGGGG
CTATGGAGCGCTGTGTTCAACGTTTCCGCTAGGCATGGCGCTCCGTTATC
TCGCGGTGGCTCATCTTTTCCCGCACGAGGGTGGTGACACCCAAGGCGTG
CACAAACTCTCACAAGAACTACTTTCACAACCGTTCATGAAGGCGTATAC
CGCACGTTTTGTTAGTCATCTACACAATGTTGACGTACCAGGGCAATCTC
TAAAAGACATAGCTGGATGGCATGGGGTAGAACTGAGGATGAGGAGATGG
TGGTTTGGCCCTATGCTTGACCACAACCTCGGTGCTATATAGAGATGTAC
GCTGGAGCCGCCAATAAGCCGAGCCATTAGTGGGGCGTTGGTGGTAGTAT
CATAGCTAGAGGATTTGGACCAGCACTTCGACAAGATCTGCGCGAGACAC
CTGCAGGATCAAACCCCATCATACAGCTC
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Coding sequence (CDS) from alignment at ch2:55661..57639-

>KJC3_001557-T1 ID=KJC3_001557-T1|Name=KJC3_001557-T1|organism=Aspergillus niger KJC3|type=CDS|length=6408bp|location=Sequence derived from alignment at ch2:55661..57639- (Aspergillus niger KJC3)
TTCATTCTAGGCGTCGGACGAAGAAAGCGTTCGCCCTTCAGCGACAACAA
CTGGATGTCAGCACCCTGGAAATACAGAACAAAGTCCCTACTTCATGGTC
TGACTGACATTCTGGTTCAAGTTCCGGGTTTATTGGAAGAGCTGGACACC
ATTAGAGCATCTCCTATTGCGGAGCGTAGTCTACGTGGCTGGGAAAACTT
GCTTGGCGAATGTATCCGCATCGAGCAAATGTTACTTGCCTGGAAGGAAA
CCATGGGAGACAAACTGCAGACCTTTGATTACACCCAATCGGGGAATTCC
CCCCAGATGCCACAGGTGGACAGGGACTTTGCATTGTTGCACATGAGCTG
TCTCTATTGGAGCTGCTGTATCCTCCTATACACGACAATCCATATGGCTG
CGAATGAGGCGCATCAGGGTCCAAGCTTCACATACTTCTTGACAATTCCC
TTTTCTTCTCCAGGATGCCCCAACTATCGCGATGAGAGGAACCCGACTTT
GCACGCCCACAGGATAATCTACACCATACCTTTATCACATGGGCCTTATG
CCGGGGGCTATGGAGCGCTGTGTTCAACGTTTCCGCTAGGCATGGCGCTC
CGTTATCTCGCGGTGGCTCATCTTTTCCCGCACGAGGGTGGTGACACCCA
AGGCGTGCACAAACTCTCACAAGAACTACTTTCACAACCGTTCATGAAGG
CGTATACCGCACGTTTTGTTAGTCATCTACACAATGTTGACGTACCAGGG
CAATCTCTAAAAGACATAGCTGGATGGCATGGGGTAGAACTGAGGATGAG
GAGATGGTGGTTTGGCCCTATGCTTGACCACAACCTCGGTGCTATATAGA
TTCTCTATGGCGCCGAGTCCCGTGGTTCGGACAAAGAAAACCCTACCCTC
CAAATCAAGGGGTACTACGCCCATACTGACGGTGAAATGGCCTTGTTCAT
GAACAGGGGCTGGCAGAAGGATTGGAGCGAAGCTGGAATGTACTTACTCG
TAAGCGGCCGGATTGTGTCATGCGACAGGAAGACCCCTTTTTGTACCCAG
TGCGTTCACGCTAGGCTCGTATGCGAGGGCTACTCTCGCAACTATTCGGT
CTGGATCAACTCGACAGACGGCGAGAATCGCAAGTACACCAAGTGTACCG
GCAGCGTACAATCTCGTAGACGCGGGGCTCCAGAAATCACCCTGCATGAG
TCGCTGGCGAGAAGTACCAGAGAGGTTACTTACGTCGGTCTTTATCTGGC
AGCGTTCTTACCAAATGGTCGCCTTTTCACCCAGGAGGCCGCGCAGATAT
CCTCTGCGGGGTGGCTAAGACACCTTGACAAATTATGTCGGTCTGAGAAA
ACTCTGCGCTTCATTACCCTTGCTCACGGGCTGTCAATGCTGGCTACGAG
AGACCACGACAGCCAGCTGAAGTTCAAGGGCGTCCAGGCACACAGCATAG
CGCTGCAGGAAATGCGCACAGCCCTGCGGGATCCACAAAGGGCCTCGGGA
GATGGGATCTTGGCCGCTATTCGGCTGTTCCGCTTTTATGAGATGGTCGG
CGTGCCCGGTCAATATGGCGGGTGTGCGACATGTCGCAGGAGGAAAAAAG
GCTTCATTCTAGGCGTCGGACGAAGAAAGCGTTCGCCCTTCAGCGACAAC
AACTGGATGTCAGCACCCTGGAAATACAGAACAAAGTCCCTACTTCATGG
TCTGACTGACATTCTGGTTCAAGTTCCGGGTTTATTGGAAGAGCTGGACA
CCATTAGAGCATCTCCTATTGCGGAGCGTAGTCTACGTGGCTGGGAAAAC
TTGCTTGGCGAATGTATCCGCATCGAGCAAATGTTACTTGCCTGGAAGGA
AACCATGGGAGACAAACTGCAGACCTTTGATTACACCCAATCGGGGAATT
CCCCCCAGATGCCACAGGTGGACAGGGACTTTGCATTGTTGCACATGAGC
TGTCTCTATTGGAGCTGCTGTATCCTCCTATACACGACAATCCATATGGC
TGCGAATGAGGCGCATCAGGGTCCAAGCTTCACATACTTCTTGACAATTC
CCTTTTCTTCTCCAGGATGCCCCAACTATCGCGATGAGAGGAACCCGACT
TTGCACGCCCACAGGATAATCTACACCATACCTTTATCACATGGGCCTTA
TGCCGGGGGCTATGGAGCGCTGTGTTCAACGTTTCCGCTAGGCATGGCGC
TCCGTTATCTCGCGGTGGCTCATCTTTTCCCGCACGAGGGTGGTGACACC
CAAGGCGTGCACAAACTCTCACAAGAACTACTTTCACAACCGTTCATGAA
GGCGTATACCGCACGTTTTGTTAGTCATCTACACAATGTTGACGTACCAG
GGCAATCTCTAAAAGACATAGCTGGATGGCATGGGGTAGAACTGAGGATG
AGGAGATGGTGGTTTGGCCCTATGCTTGACCACAACCTCGGTGCTATATA
GATTCTCTATGGCGCCGAGTCCCGTGGTTCGGACAAAGAAAACCCTACCC
TCCAAATCAAGGGGTACTACGCCCATACTGACGGTGAAATGGCCTTGTTC
ATGAACAGGGGCTGGCAGAAGGATTGGAGCGAAGCTGGAATGTACTTACT
CGTAAGCGGCCGGATTGTGTCATGCGACAGGAAGACCCCTTTTTGTACCC
AGTGCGTTCACGCTAGGCTCGTATGCGAGGGCTACTCTCGCAACTATTCG
GTCTGGATCAACTCGACAGACGGCGAGAATCGCAAGTACACCAAGTGTAC
CGGCAGCGTACAATCTCGTAGACGCGGGGCTCCAGAAATCACCCTGCATG
AGTCGCTGGCGAGAAGTACCAGAGAGGTTACTTACGTCGGTCTTTATCTG
GCAGCGTTCTTACCAAATGGTCGCCTTTTCACCCAGGAGGCCGCGCAGAT
ATCCTCTGCGGGGTGGCTAAGACACCTTGACAAATTATGTCGGTCTGAGA
AAACTCTGCGCTTCATTACCCTTGCTCACGGGCTGTCAATGCTGGCTACG
AGAGACCACGACAGCCAGCTGAAGTTCAAGGGCGTCCAGGCACACAGCAT
AGCGCTGCAGGAAATGCGCACAGCCCTGCGGGATCCACAAAGGGCCTCGG
GAGATGGGATCTTGGCCGCTATTCGGCTGTTCCGCTTTTATGAGATGGTC
GGCGTGCCCGGTCAATATGGCGGGTGTGCGACATGTCGCAGGAGGAAAAA
AGGCTTCATTCTAGGCGTCGGACGAAGAAAGCGTTCGCCCTTCAGCGACA
ACAACTGGATGTCAGCACCCTGGAAATACAGAACAAAGTCCCTACTTCAT
GGTCTGACTGACATTCTGGTTCAAGTTCCGGGTTTATTGGAAGAGCTGGA
CACCATTAGAGCATCTCCTATTGCGGAGCGTAGTCTACGTGGCTGGGAAA
ACTTGCTTGGCGAATGTATCCGCATCGAGCAAATGTTACTTGCCTGGAAG
GAAACCATGGGAGACAAACTGCAGACCTTTGATTACACCCAATCGGGGAA
TTCCCCCCAGATGCCACAGGTGGACAGGGACTTTGCATTGTTGCACATGA
GCTGTCTCTATTGGAGCTGCTGTATCCTCCTATACACGACAATCCATATG
GCTGCGAATGAGGCGCATCAGGGTCCAAGCTTCACATACTTCTTGACAAT
TCCCTTTTCTTCTCCAGGATGCCCCAACTATCGCGATGAGAGGAACCCGA
CTTTGCACGCCCACAGGATAATCTACACCATACCTTTATCACATGGGCCT
TATGCCGGGGGCTATGGAGCGCTGTGTTCAACGTTTCCGCTAGGCATGGC
GCTCCGTTATCTCGCGGTGGCTCATCTTTTCCCGCACGAGGGTGGTGACA
CCCAAGGCGTGCACAAACTCTCACAAGAACTACTTTCACAACCGTTCATG
AAGGCGTATACCGCACGTTTTGTTAGTCATCTACACAATGTTGACGTACC
AGGGCAATCTCTAAAAGACATAGCTGGATGGCATGGGGTAGAACTGAGGA
TGAGGAGATGGTGGTTTGGCCCTATGCTTGACCACAACCTCGGTGCTATA
TAGATTCTCTATGGCGCCGAGTCCCGTGGTTCGGACAAAGAAAACCCTAC
CCTCCAAATCAAGGGGTACTACGCCCATACTGACGGTGAAATGGCCTTGT
TCATGAACAGGGGCTGGCAGAAGGATTGGAGCGAAGCTGGAATGTACTTA
CTCGTAAGCGGCCGGATTGTGTCATGCGACAGGAAGACCCCTTTTTGTAC
CCAGTGCGTTCACGCTAGGCTCGTATGCGAGGGCTACTCTCGCAACTATT
CGGTCTGGATCAACTCGACAGACGGCGAGAATCGCAAGTACACCAAGTGT
ACCGGCAGCGTACAATCTCGTAGACGCGGGGCTCCAGAAATCACCCTGCA
TGAGTCGCTGGCGAGAAGTACCAGAGAGGTTACTTACGTCGGTCTTTATC
TGGCAGCGTTCTTACCAAATGGTCGCCTTTTCACCCAGGAGGCCGCGCAG
ATATCCTCTGCGGGGTGGCTAAGACACCTTGACAAATTATGTCGGTCTGA
GAAAACTCTGCGCTTCATTACCCTTGCTCACGGGCTGTCAATGCTGGCTA
CGAGAGACCACGACAGCCAGCTGAAGTTCAAGGGCGTCCAGGCACACAGC
ATAGCGCTGCAGGAAATGCGCACAGCCCTGCGGGATCCACAAAGGGCCTC
GGGAGATGGGATCTTGGCCGCTATTCGGCTGTTCCGCTTTTATGAGATGG
TCGGCGTGCCCGGTCAATATGGCGGGTGTGCGACATGTCGCAGGAGGAAA
AAAGGCTTCATTCTAGGCGTCGGACGAAGAAAGCGTTCGCCCTTCAGCGA
CAACAACTGGATGTCAGCACCCTGGAAATACAGAACAAAGTCCCTACTTC
ATGGTCTGACTGACATTCTGGTTCAAGTTCCGGGTTTATTGGAAGAGCTG
GACACCATTAGAGCATCTCCTATTGCGGAGCGTAGTCTACGTGGCTGGGA
AAACTTGCTTGGCGAATGTATCCGCATCGAGCAAATGTTACTTGCCTGGA
AGGAAACCATGGGAGACAAACTGCAGACCTTTGATTACACCCAATCGGGG
AATTCCCCCCAGATGCCACAGGTGGACAGGGACTTTGCATTGTTGCACAT
GAGCTGTCTCTATTGGAGCTGCTGTATCCTCCTATACACGACAATCCATA
TGGCTGCGAATGAGGCGCATCAGGGTCCAAGCTTCACATACTTCTTGACA
ATTCCCTTTTCTTCTCCAGGATGCCCCAACTATCGCGATGAGAGGAACCC
GACTTTGCACGCCCACAGGATAATCTACACCATACCTTTATCACATGGGC
CTTATGCCGGGGGCTATGGAGCGCTGTGTTCAACGTTTCCGCTAGGCATG
GCGCTCCGTTATCTCGCGGTGGCTCATCTTTTCCCGCACGAGGGTGGTGA
CACCCAAGGCGTGCACAAACTCTCACAAGAACTACTTTCACAACCGTTCA
TGAAGGCGTATACCGCACGTTTTGTTAGTCATCTACACAATGTTGACGTA
CCAGGGCAATCTCTAAAAGACATAGCTGGATGGCATGGGGTAGAACTGAG
GATGAGGAGATGGTGGTTTGGCCCTATGCTTGACCACAACCTCGGTGCTA
TATAGATTCTCTATGGCGCCGAGTCCCGTGGTTCGGACAAAGAAAACCCT
ACCCTCCAAATCAAGGGGTACTACGCCCATACTGACGGTGAAATGGCCTT
GTTCATGAACAGGGGCTGGCAGAAGGATTGGAGCGAAGCTGGAATGTACT
TACTCGTAAGCGGCCGGATTGTGTCATGCGACAGGAAGACCCCTTTTTGT
ACCCAGTGCGTTCACGCTAGGCTCGTATGCGAGGGCTACTCTCGCAACTA
TTCGGTCTGGATCAACTCGACAGACGGCGAGAATCGCAAGTACACCAAGT
GTACCGGCAGCGTACAATCTCGTAGACGCGGGGCTCCAGAAATCACCCTG
CATGAGTCGCTGGCGAGAAGTACCAGAGAGGTTACTTACGTCGGTCTTTA
TCTGGCAGCGTTCTTACCAAATGGTCGCCTTTTCACCCAGGAGGCCGCGC
AGATATCCTCTGCGGGGTGGCTAAGACACCTTGACAAATTATGTCGGTCT
GAGAAAACTCTGCGCTTCATTACCCTTGCTCACGGGCTGTCAATGCTGGC
TACGAGAGACCACGACAGCCAGCTGAAGTTCAAGGGCGTCCAGGCACACA
GCATAGCGCTGCAGGAAATGCGCACAGCCCTGCGGGATCCACAAAGGGCC
TCGGGAGATGGGATCTTGGCCGCTATTCGGCTGTTCCGCTTTTATGAGAT
GGTCGGCGTGCCCGGTCAATATGGCGGGTGTGCGACATGTCGCAGGAGGA
AAAAAGGC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001557KJC3_001557Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001557-T1KJC3_001557-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001557-T1.cdsKJC3_001557-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001557-T1.utr3p1KJC3_001557-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001557-T1.exon4KJC3_001557-T1.exon4Aspergillus niger KJC3exon
KJC3_001557-T1.exon3KJC3_001557-T1.exon3Aspergillus niger KJC3exon
KJC3_001557-T1.exon2KJC3_001557-T1.exon2Aspergillus niger KJC3exon
KJC3_001557-T1.exon1KJC3_001557-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001557-T1.utr5p1KJC3_001557-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:55661..57639 -
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