You are here

Home

KJC3_001558-T1, KJC3_001558-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001558-T1
Unique NameKJC3_001558-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:58012..60103-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001558-T1 ID=KJC3_001558-T1|Name=KJC3_001558-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2092bp|location=Sequence derived from alignment at ch2:58012..60103- (Aspergillus niger KJC3)
TGCCTTCTCATTGTGATCGTAAGGATACAAACTCATAGGAACCTCAAACC
CACAAAGGCTCGGTCGAATTCAACTGGAAAATAAAGGCAATGGCTATTCC
CGCCCTTCAAGGCTGGCACCCCGGCGAAGTCGCCATCCAACGCCAGCTGG
GTTACGCGACCGCCGTGTCATCTCACTGGACTGCGGTCGAAAACCAACTC
CGTGAACAACATCAATTATTTCACACTTCGAAACTGCCATTCATTCCGCT
GACGACTACGGATGCCGATGGACGGCCCTGGGCAGGAATCGTTGCAGGAT
CAACAGGAACAATCGGGTTCGTAGAAAGTCCAAGCTTAAAGTCGTTGGTT
TTCCGAGCAAAATTATGGGACGGAGATCCAATGTTAGAAACGCTCCGGGA
GTGGAAACCGCTGGAAGATGATCAAATAAAAGGCCCAATATTGCAGGAGA
GGTTACTGACGGCTGGGTTGGGGATTGAGTTTTCCACTCGGAGAAGGAAC
AAGTTCGCCGGGAAGATTGACATGGTGAAGGCGAGGTCAGACCAGGATTA
TGATTTTGGTGTTGAGATCACCGAGGCGTTGGGGTACGTATACGTTCACA
TCTGAGAAGAGTCAAAACAAGGGAAATCAGGACTGAGCGAGATTACAGTA
ATTGCCCGAAGTATATCAATGTGCGTCAGCTCGATCCATACCCATGGGCG
AAACCACACATTGCATACCAATCACTGCATATGGCACCGACGGAGGGCTT
ACCTGACGAAGTAATCGATATGATAAAATCCGCTGACACAGTCTTCGTGG
CAACAATACACAGAACTGACCCCGCCTCCGCAGCAATGTTCCCTTCACAC
GCGGGCATGAACTCTCGTGGCGGTTTTCCGGGGTTTCTACGAGTGAGGCC
ATCAGATCGACGGAGCATTGTGTTGCCTGATTACTCTGGAAACAGATTCA
TGAGTAGTCTTGGCAATATTGAGTCGAGCGGGTTAGCGGGCTTTACGATC
ATTTCGTTCACAACCGGCGACATCCTGTACTTGACCGGTACAGCAAGGAA
TTTGGTCGGGCTATCTGCCCTCGAAATGATGTTTAGACATGCGACGGTTA
CTGTTCTGGAAACCACAGGGTTTACGCTTGTGCGCAATGCGCTTCCCTTG
CGACAGCGCAATGGATCGGAGGTCGGGCGGAGCCCCTACACTCCCAAAGT
CAAATATCTGGTCGAAGAAGGAGAAACGTACGCGGGTGGGATGCAAGGGC
ACAAGGCGGTGCTTGGAACAGGTATGCAACTTTCTAATGACCTGGCTGTC
TTCAGGTTCAAGGTCGTGTCTAAAAGCGGCGTTCAGCCGTTAAGGCTCCG
ACCGGGTCAAGCTATCGTCCTCGATTTCATGGACTGGATAGGTCCACCGC
AGTACCAGCATATGGCGGATTCGGCACCTGGGTCAATTAATGATGACCGC
GTGCGAACCTGGACAGTATCTAGTGCGCACGAGGGTATTGATGTTGCATG
GTTTGAATTAACAATGCGGGAAATGAAGGGTGGCGTTGTGACAACGGCCT
TGTTCAATCTGCTTAGGATGTCCCCTCCCAATAGACGGGATTATCCTGTT
TCTCTAAAGGGGAATGTCGTCTCAGATATTATAGGGGTCACTGGGGATTT
CGCATTGAATAAAGAGGAGGTCAACCTGCTCCTGATTGCTGGTGGAATCG
GGGTGACACCCTTTCTGGCCATGCTGAATGCCTTGAGTAAGCGCAAGAAG
GCTGCGCGAGGCGACATTGTGCTCGTGTTATCAACAAGAGAGCCAGATGC
CATGCTCACCCTGATCAGACGGGCTATGGGTAAGGTTCCACCGACCGTCA
CGGTGAGAATAGATCTGTTCACCAGCCGCCCCCTCGACTTGGATACTAGG
ACTTTGAAGCATGAAAATACGAGCCTCTCGGTATTTGAAGGTAGGGTTGG
ACCGGAATATTGGAAACCGAGCGCCAGAGAAAAGGAAGTGTTCATATGTG
GCCCGAAGGCATTCGCAGACGCTGCTGTGGAAGGATTGCGGGCTATTGGT
GTACCAAGTGAGAAAATCCAGAGGGAGGGATTTTATTAGTGT
back to top

Coding sequence (CDS) from alignment at ch2:58012..60103-

>KJC3_001558-T1 ID=KJC3_001558-T1|Name=KJC3_001558-T1|organism=Aspergillus niger KJC3|type=CDS|length=3870bp|location=Sequence derived from alignment at ch2:58012..60103- (Aspergillus niger KJC3)
TAATTGCCCGAAGTATATCAATGTGCGTCAGCTCGATCCATACCCATGGG
CGAAACCACACATTGCATACCAATCACTGCATATGGCACCGACGGAGGGC
TTACCTGACGAAGTAATCGATATGATAAAATCCGCTGACACAGTCTTCGT
GGCAACAATACACAGAACTGACCCCGCCTCCGCAGCAATGTTCCCTTCAC
ACGCGGGCATGAACTCTCGTGGCGGTTTTCCGGGGTTTCTACGAGTGAGG
CCATCAGATCGACGGAGCATTGTGTTGCCTGATTACTCTGGAAACAGATT
CATGAGTAGTCTTGGCAATATTGAGTCGAGCGGGTTAGCGGGCTTTACGA
TCATTTCGTTCACAACCGGCGACATCCTGTACTTGACCGGTACAGCAAGG
AATTTGGTCGGGCTATCTGCCCTCGAAATGATGTTTAGACATGCGACGGT
TACTGTTCTGGAAACCACAGGGTTTACGCTTGTGCGCAATGCGCTTCCCT
TGCGACAGCGCAATGGATCGGAGGTCGGGCGGAGCCCCTACACTCCCAAA
GTCAAATATCTGGTCGAAGAAGGAGAAACGTACGCGGGTGGGATGCAAGG
GCACAAGGCGGTGCTTGGAACAGGTATGCAACTTTCTAATGACCTGGCTG
TCTTCAGGTTCAAGGTCGTGTCTAAAAGCGGCGTTCAGCCGTTAAGGCTC
CGACCGGGTCAAGCTATCGTCCTCGATTTCATGGACTGGATAGGTCCACC
GCAGTACCAGCATATGGCGGATTCGGCACCTGGGTCAATTAATGATGACC
GCGTGCGAACCTGGACAGTATCTAGTGCGCACGAGGGTATTGATGTTGCA
TGGTTTGAATTAACAATGCGGGAAATGAAGGGTGGCGTTGTGACAACGGC
CTTGTTCAATCTGCTTAGGATGTCCCCTCCCAATAGACGGGATTATCCTG
TTTCTCTAAAGGGGAATGTCGTCTCAGATATTATAGGGGTCACTGGGGAT
TTCGCATTGAATAAAGAGGAGGTCAACCTGCTCCTGATTGCTGGTGGAAT
CGGGGTGACACCCTTTCTGGCCATGCTGAATGCCTTGAGTAAGCGCAAGA
AGGCTGCGCGAGGCGACATTGTGCTCGTGTTATCAACAAGAGAGCCAGAT
GCCATGCTCACCCTGATCAGACGGGCTATGGGTAAGGTTCCACCGACCGT
CACGGTGAGAATAGATCTGTTCACCAGCCGCCCCCTCGACTTGGATACTA
GGACTTTGAAGCATGAAAATACGAGCCTCTCGGTATTTGAAGGTAGGGTT
GGACCGGAATATTGGAAACCGAGCGCCAGAGAAAAGGAAGTGTTCATATG
TGGCCCGAAGGCATTCGCAGACGCTGCTGTGGAAGGATTGCGGGCTATTG
GTGTACCAAGTGAGAAAATCCAGAGGGAGGGATTTTATTAGATGGCTATT
CCCGCCCTTCAAGGCTGGCACCCCGGCGAAGTCGCCATCCAACGCCAGCT
GGGTTACGCGACCGCCGTGTCATCTCACTGGACTGCGGTCGAAAACCAAC
TCCGTGAACAACATCAATTATTTCACACTTCGAAACTGCCATTCATTCCG
CTGACGACTACGGATGCCGATGGACGGCCCTGGGCAGGAATCGTTGCAGG
ATCAACAGGAACAATCGGGTTCGTAGAAAGTCCAAGCTTAAAGTCGTTGG
TTTTCCGAGCAAAATTATGGGACGGAGATCCAATGTTAGAAACGCTCCGG
GAGTGGAAACCGCTGGAAGATGATCAAATAAAAGGCCCAATATTGCAGGA
GAGGTTACTGACGGCTGGGTTGGGGATTGAGTTTTCCACTCGGAGAAGGA
ACAAGTTCGCCGGGAAGATTGACATGGTGAAGGCGAGGTCAGACCAGGAT
TATGATTTTGGTGTTGAGATCACCGAGGCGTTGGGTAATTGCCCGAAGTA
TATCAATGTGCGTCAGCTCGATCCATACCCATGGGCGAAACCACACATTG
CATACCAATCACTGCATATGGCACCGACGGAGGGCTTACCTGACGAAGTA
ATCGATATGATAAAATCCGCTGACACAGTCTTCGTGGCAACAATACACAG
AACTGACCCCGCCTCCGCAGCAATGTTCCCTTCACACGCGGGCATGAACT
CTCGTGGCGGTTTTCCGGGGTTTCTACGAGTGAGGCCATCAGATCGACGG
AGCATTGTGTTGCCTGATTACTCTGGAAACAGATTCATGAGTAGTCTTGG
CAATATTGAGTCGAGCGGGTTAGCGGGCTTTACGATCATTTCGTTCACAA
CCGGCGACATCCTGTACTTGACCGGTACAGCAAGGAATTTGGTCGGGCTA
TCTGCCCTCGAAATGATGTTTAGACATGCGACGGTTACTGTTCTGGAAAC
CACAGGGTTTACGCTTGTGCGCAATGCGCTTCCCTTGCGACAGCGCAATG
GATCGGAGGTCGGGCGGAGCCCCTACACTCCCAAAGTCAAATATCTGGTC
GAAGAAGGAGAAACGTACGCGGGTGGGATGCAAGGGCACAAGGCGGTGCT
TGGAACAGGTATGCAACTTTCTAATGACCTGGCTGTCTTCAGGTTCAAGG
TCGTGTCTAAAAGCGGCGTTCAGCCGTTAAGGCTCCGACCGGGTCAAGCT
ATCGTCCTCGATTTCATGGACTGGATAGGTCCACCGCAGTACCAGCATAT
GGCGGATTCGGCACCTGGGTCAATTAATGATGACCGCGTGCGAACCTGGA
CAGTATCTAGTGCGCACGAGGGTATTGATGTTGCATGGTTTGAATTAACA
ATGCGGGAAATGAAGGGTGGCGTTGTGACAACGGCCTTGTTCAATCTGCT
TAGGATGTCCCCTCCCAATAGACGGGATTATCCTGTTTCTCTAAAGGGGA
ATGTCGTCTCAGATATTATAGGGGTCACTGGGGATTTCGCATTGAATAAA
GAGGAGGTCAACCTGCTCCTGATTGCTGGTGGAATCGGGGTGACACCCTT
TCTGGCCATGCTGAATGCCTTGAGTAAGCGCAAGAAGGCTGCGCGAGGCG
ACATTGTGCTCGTGTTATCAACAAGAGAGCCAGATGCCATGCTCACCCTG
ATCAGACGGGCTATGGGTAAGGTTCCACCGACCGTCACGGTGAGAATAGA
TCTGTTCACCAGCCGCCCCCTCGACTTGGATACTAGGACTTTGAAGCATG
AAAATACGAGCCTCTCGGTATTTGAAGGTAGGGTTGGACCGGAATATTGG
AAACCGAGCGCCAGAGAAAAGGAAGTGTTCATATGTGGCCCGAAGGCATT
CGCAGACGCTGCTGTGGAAGGATTGCGGGCTATTGGTGTACCAAGTGAGA
AAATCCAGAGGGAGGGATTTTATTAGATGGCTATTCCCGCCCTTCAAGGC
TGGCACCCCGGCGAAGTCGCCATCCAACGCCAGCTGGGTTACGCGACCGC
CGTGTCATCTCACTGGACTGCGGTCGAAAACCAACTCCGTGAACAACATC
AATTATTTCACACTTCGAAACTGCCATTCATTCCGCTGACGACTACGGAT
GCCGATGGACGGCCCTGGGCAGGAATCGTTGCAGGATCAACAGGAACAAT
CGGGTTCGTAGAAAGTCCAAGCTTAAAGTCGTTGGTTTTCCGAGCAAAAT
TATGGGACGGAGATCCAATGTTAGAAACGCTCCGGGAGTGGAAACCGCTG
GAAGATGATCAAATAAAAGGCCCAATATTGCAGGAGAGGTTACTGACGGC
TGGGTTGGGGATTGAGTTTTCCACTCGGAGAAGGAACAAGTTCGCCGGGA
AGATTGACATGGTGAAGGCGAGGTCAGACCAGGATTATGATTTTGGTGTT
GAGATCACCGAGGCGTTGGG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001558KJC3_001558Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001558-T1KJC3_001558-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001558-T1.cdsKJC3_001558-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001558-T1.utr3p1KJC3_001558-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001558-T1.exon2KJC3_001558-T1.exon2Aspergillus niger KJC3exon
KJC3_001558-T1.exon1KJC3_001558-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001558-T1.utr5p1KJC3_001558-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR017938
DBxrefInterPro:IPR039261
DBxrefInterPro:IPR001433
DBxrefInterPro:IPR012349
DBxrefPFAM:PF00175
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:58012..60103 -
Powered by Drupal