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KJC3_001560-T1, KJC3_001560-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001560-T1
Unique NameKJC3_001560-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:62498..63440+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001560-T1 ID=KJC3_001560-T1|Name=KJC3_001560-T1|organism=Aspergillus niger KJC3|type=mRNA|length=943bp|location=Sequence derived from alignment at ch2:62498..63440+ (Aspergillus niger KJC3)
ATGAACGTACAATCTGCTTCAGGCTCGGCTTCGCCTTCTACTTGGGGTGA
GATCTATCAAGTTCCAGGCCGGACCTCTCGGGAAATCCTTCTGAGAGCAA
GAGAGCTATGCCTCAGTGGGAATATCCAACAATTCCGCGACCTCATTGAC
TCGGCACAATCGTCATCGGAGAACTTTCATATAGAAGACTTCGGTATTAT
CATGGGGCAGGCTGTCGAGCAAGACAGCGTGATCTTCATGCGGGAGCTGA
TGGATCGTGGCTTTCCCACGCATTCAATCTACGCCCGGAACGCAACCAGA
TTCAAATCCAAGAATGCCCTCGCTCTTCTTATTGAGAAGGGATGGGATAT
CAACGAGCCAATGTGCGAGACCCAACCCCCGTCCTAGAGTGAGACCATAC
TCCAATCCTTCGCGAGATAACAATCTACTAATCCCTCTCAGCATTGCCAT
AGAGGACGAAGAGATGACGACTTGGTTCTTGGACCATGGAGCGGATCCTA
ATAGACGAACGTTCATAGACCTTACCCCGCTTTCGTGGGCTGTTGGAAGA
TCACCCGTTTCCGTTATCCGCCTCATGCTGGATTATTGCCAAGATATTCA
TCCAGGTCAGCTGCTTCATCATGCGGTTCAACGCGAATCTGACACTATCG
AAGTACTGGAAATGTTAATCCAGAAGGGAGCGCCTCTTAACACTCCCGTG
CACGAAGACCTTCCTACCTTATCGATTCTTTGCTTTATGCCTCTAGGAAC
TGCTCTGCACCGGGCATGTGAGCTCGGAAAAGTGGATGTGGTTCGCTATC
TCCTCAGCAAAGGAGCCGACCAGAGTGTCAGAGATAGTAATGGACTTACA
GCTATTGAACTGGCTGCTGGATTGAACCAGCAAGAAGTGGTTGAAGTGCT
GCAGAAACATAGAAACGGCGGAAATCCCGTTGACCACCCCTGA
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Coding sequence (CDS) from alignment at ch2:62498..63440+

>KJC3_001560-T1 ID=KJC3_001560-T1|Name=KJC3_001560-T1|organism=Aspergillus niger KJC3|type=CDS|length=1728bp|location=Sequence derived from alignment at ch2:62498..63440+ (Aspergillus niger KJC3)
ATGAACGTACAATCTGCTTCAGGCTCGGCTTCGCCTTCTACTTGGGGTGA
GATCTATCAAGTTCCAGGCCGGACCTCTCGGGAAATCCTTCTGAGAGCAA
GAGAGCTATGCCTCAGTGGGAATATCCAACAATTCCGCGACCTCATTGAC
TCGGCACAATCGTCATCGGAGAACTTTCATATAGAAGACTTCGGTATTAT
CATGGGGCAGGCTGTCGAGCAAGACAGCGTGATCTTCATGCGGGAGCTGA
TGGATCGTGGCTTTCCCACGCATTCAATCTACGCCCGGAACGCAACCAGA
TTCAAATCCAAGAATGCCCTCGCTCTTCTTATTGAGAAGGGATGGGATAT
CAACGAGCCAATCATTGCCATAGAGGACGAAGAGATGACGACTTGGTTCT
TGGACCATGGAGCGGATCCTAATAGACGAACGTTCATAGACCTTACCCCG
CTTTCGTGGGCTGTTGGAAGATCACCCGTTTCCGTTATCCGCCTCATGCT
GGATTATTGCCAAGATATTCATCCAGGTCAGCTGCTTCATCATGCGGTTC
AACGCGAATCTGACACTATCGAAGTACTGGAAATGTTAATCCAGAAGGGA
GCGCCTCTTAACACTCCCGTGCACGAAGACCTTCCTACCTTATCGATTCT
TTGCTTTATGCCTCTAGGAACTGCTCTGCACCGGGCATGTGAGCTCGGAA
AAGTGGATGTGGTTCGCTATCTCCTCAGCAAAGGAGCCGACCAGAGTGTC
AGAGATAGTAATGGACTTACAGCTATTGAACTGGCTGCTGGATTGAACCA
GCAAGAAGTGGTTGAAGTGCTGCAGAAACATAGAAACGGCGGAAATCCCG
TTGACCACCCCTGAATGAACGTACAATCTGCTTCAGGCTCGGCTTCGCCT
TCTACTTGGGGTGAGATCTATCAAGTTCCAGGCCGGACCTCTCGGGAAAT
CCTTCTGAGAGCAAGAGAGCTATGCCTCAGTGGGAATATCCAACAATTCC
GCGACCTCATTGACTCGGCACAATCGTCATCGGAGAACTTTCATATAGAA
GACTTCGGTATTATCATGGGGCAGGCTGTCGAGCAAGACAGCGTGATCTT
CATGCGGGAGCTGATGGATCGTGGCTTTCCCACGCATTCAATCTACGCCC
GGAACGCAACCAGATTCAAATCCAAGAATGCCCTCGCTCTTCTTATTGAG
AAGGGATGGGATATCAACGAGCCAATCATTGCCATAGAGGACGAAGAGAT
GACGACTTGGTTCTTGGACCATGGAGCGGATCCTAATAGACGAACGTTCA
TAGACCTTACCCCGCTTTCGTGGGCTGTTGGAAGATCACCCGTTTCCGTT
ATCCGCCTCATGCTGGATTATTGCCAAGATATTCATCCAGGTCAGCTGCT
TCATCATGCGGTTCAACGCGAATCTGACACTATCGAAGTACTGGAAATGT
TAATCCAGAAGGGAGCGCCTCTTAACACTCCCGTGCACGAAGACCTTCCT
ACCTTATCGATTCTTTGCTTTATGCCTCTAGGAACTGCTCTGCACCGGGC
ATGTGAGCTCGGAAAAGTGGATGTGGTTCGCTATCTCCTCAGCAAAGGAG
CCGACCAGAGTGTCAGAGATAGTAATGGACTTACAGCTATTGAACTGGCT
GCTGGATTGAACCAGCAAGAAGTGGTTGAAGTGCTGCAGAAACATAGAAA
CGGCGGAAATCCCGTTGACCACCCCTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001560KJC3_001560Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001560-T1.exon1KJC3_001560-T1.exon1Aspergillus niger KJC3exon
KJC3_001560-T1.exon2KJC3_001560-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001560-T1.cdsKJC3_001560-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001560-T1KJC3_001560-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR020683
DBxrefInterPro:IPR036770
DBxrefInterPro:IPR002110
DBxrefPFAM:PF13857
DBxrefPFAM:PF13637
DBxrefPFAM:PF13606
DBxrefPFAM:PF12796
DBxrefPFAM:PF00023
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:62498..63440 +
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