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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:75436..77572+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001563-T1 ID=KJC3_001563-T1|Name=KJC3_001563-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2137bp|location=Sequence derived from alignment at ch2:75436..77572+ (Aspergillus niger KJC3)
CCAACTTCCGCTCTACCCGTCACTCCCCATCCCATCGAAAATCATGCCTA
CCGTAGATTGTCTGCCTGTGGAAGTGCGACGACGGATTTGCCTTTCTGTA
AGTGGCAGAATGAATTGTCTATAACTACGGAAGCAAAGACTCACAAACCC
ACAGGTCCGTGATTACTCATGGCATGATCTGTCCGCTCTAAGTCGAGCAA
GCAAAGAATGGCATGATTTCGCAGCTACGGAGCTTTACAGGCACCTTCGA
CTGGCATTCTCCGACCGCACAGATCTTCAGAATGACATGTCCGAGCTTCG
CACAGATGGCCTTGGTCGTCAGTACCTACGATATGCACGAACCCTCGAAC
TCGTATGTCTGAAGAAGCCAGGGCTCGAAACCAAAACAGCCAAATGTCTG
TGGCAGCAGAAGAATTGGGCAAATGAATATGTCCTCTTCAACCCTTTAGC
TTCAATGGACACACTCCTTCAGGACTCATTGTTGGAAACCCGTGACGTCT
CACTCCAGTTCCTGACCTGGACCCTCGCCTATTATCGGCAGGAGGACTGG
GAGCCGATAATCGACCTCCTTTCGCGCTTGCAGCATCTTCGGCTACTCAG
CTACGCCGTGCTCAATATGTTTCCTACTTGCCTGTTCCAAGCGCTTCAAC
AGTTACACCCAGCCTGCCAATTGGATGTCTGGACTTCCCAGTCTCCAACT
CTTGACCTACCCGGTCTAGGACGCTCCCACCGTTGCGTTGGTAAACAGTT
CAAAGAGCCTTTTGACCTCAACATCCTGCGTTCCTCAGCACTTCGTACCC
TCAAGGCGGTCTATACAGTGGGCCAGGATCCTGAACAGGGATGGATACAT
AACGACGAGGCCTTCTCTTTCATCTTCACGGCCCCGAATCTTAAACATTT
GCTCGTTGACGAGATGCCCGCCCGGCGTGATAATCCGATTATGAAGGTCA
AACGGGAATGGCAGGAGTTTGCCTCCCAGGCGAAGCCTTCTCGTACCTCA
CCCTGCATAGATACCTTGACTTTCATCAATGGCGATCCTCATCACCCGTA
TGAGCGCATCCTTCTCAATATCTCAACCATGGTTGATCTCTCTAGACTGC
GATCCCTTGATGTGGCCGTCAATTCGGAGCCGGCTATGTTAAGTAAAGCA
GCATCGATCCTCGGTCATTTGGAACGTCTGTATGTACATATGGTTCCCTG
GAATAAGCAACGCATCACCGATTGGTACAATGATCCCGAGGGTTCCACAT
GGGATGATGAAGAAATGATATCTGCAGTGCAAGCATTCAGGCCGCTACGG
TTTTTGTGCCTGCGGGGGTTGCGAAATTTTTCCTCTCTATCCCGCATTCT
CTCCTCCCACCACTCCTTGGAGGGCCTCAGTCTTGAGGGTTCCGATCGGC
ATCCGCGAACACCCCCAGATGGATTCAAATACCCTATCTTCAATAGCGAA
CACATTCGGTCCATAGCCAAGTTATGCCCGCGACTCGAAGAGCTCCGCAT
GCCACTACAGCGGTCTCAGGGTAATGCTCAGGAGTGCGAGATTTATAAGG
CCCTCGGGCAGCTTTCGCGCATTCAGACCGTTTACCTCGATCTTGACTGC
GATCCTCGGAGTTCGCCACAAGAGGACGAAATCCCAGGTCCCAGCTGCCT
CCGGGAGATTCTCATCAACTCCGCCATTGACGAAAGCCTCGTAACCGAAA
TCTTTAAGCTTGTTTTCGTTCACCAGCAGACTCGCAAAATCAAGAACTTG
CGCGTCAATCTCGTGGGAGCAGATGGCTTTAGTCGAGAACTGGAACATGT
GATCCGGCAGCTTGCTAGATCATTCCTTGTCACCCGAAATGACTTTTACC
TCAATACGGATGAGCTAGTGGAGGTCAAGGAGATTGGGGGAGTCGCGTGG
CAATTGTGGCGTGAGGACGAGATTGGCTATTCGGGGCCCGTCCATATCCC
TCGGGATATCAAGGAGGTTTTGGAGGAGTTCTGGCCGTTGCAATCGGATA
GGAATCGAAGTAAGAAGTGGAAGGAGTTTCCATTGCTGGTCCGAAGTTTT
CCCCTGGAGAGTATGCACTGAATAAGCCTAGTGAGGAAGTCAACTTTACC
CGATTTTGTAGTAAGATTCAATACACATTTGCTTGGC back to topCoding sequence (CDS) from alignment at ch2:75436..77572+ >KJC3_001563-T1 ID=KJC3_001563-T1|Name=KJC3_001563-T1|organism=Aspergillus niger KJC3|type=CDS|length=5769bp|location=Sequence derived from alignment at ch2:75436..77572+ (Aspergillus niger KJC3)
ATGCCTACCGTAGATTGTCTGCCTGTGGAAGTGCGACGACGGATTTGCCT
TTCTGTCCGTGATTACTCATGGCATGATCTGTCCGCTCTAAGTCGAGCAA
GCAAAGAATGGCATGATTTCGCAGCTACGGAGCTTTACAGGCACCTTCGA
CTGGCATTCTCCGACCGCACAGATCTTCAGAATGACATGTCCGAGCTTCG
CACAGATGGCCTTGGTCGTCAGTACCTACGATATGCACGAACCCTCGAAC
TCGTATGTCTGAAGAAGCCAGGGCTCGAAACCAAAACAGCCAAATGTCTG
TGGCAGCAGAAGAATTGGGCAAATGAATATGTCCTCTTCAACCCTTTAGC
TTCAATGGACACACTCCTTCAGGACTCATTGTTGGAAACCCGTGACGTCT
CACTCCAGTTCCTGACCTGGACCCTCGCCTATTATCGGCAGGAGGACTGG
GAGCCGATAATCGACCTCCTTTCGCGCTTGCAGCATCTTCGGCTACTCAG
CTACGCCGTGCTCAATATGTTTCCTACTTGCCTGTTCCAAGCGCTTCAAC
AGTTACACCCAGCCTGCCAATTGGATGTCTGGACTTCCCAGTCTCCAACT
CTTGACCTACCCGGTCTAGGACGCTCCCACCGTTGCGTTGGTAAACAGTT
CAAAGAGCCTTTTGACCTCAACATCCTGCGTTCCTCAGCACTTCGTACCC
TCAAGGCGGTCTATACAGTGGGCCAGGATCCTGAACAGGGATGGATACAT
AACGACGAGGCCTTCTCTTTCATCTTCACGGCCCCGAATCTTAAACATTT
GCTCGTTGACGAGATGCCCGCCCGGCGTGATAATCCGATTATGAAGGTCA
AACGGGAATGGCAGGAGTTTGCCTCCCAGGCGAAGCCTTCTCGTACCTCA
CCCTGCATAGATACCTTGACTTTCATCAATGGCGATCCTCATCACCCACT
GCGATCCCTTGATGTGGCCGTCAATTCGGAGCCGGCTATGTTAAGTAAAG
CAGCATCGATCCTCGGTCATTTGGAACGTCTGTATGTACATATGGTTCCC
TGGAATAAGCAACGCATCACCGATTGGTACAATGATCCCGAGGGTTCCAC
ATGGGATGATGAAGAAATGATATCTGCAGTGCAAGCATTCAGGCCGCTAC
GGTTTTTGTGCCTGCGGGGGTTGCGAAATTTTTCCTCTCTATCCCGCATT
CTCTCCTCCCACCACTCCTTGGAGGGCCTCAGTCTTGAGGGTTCCGATCG
GCATCCGCGAACACCCCCAGATGGATTCAAATACCCTATCTTCAATAGCG
AACACATTCGGTCCATAGCCAAGTTATGCCCGCGACTCGAAGAGCTCCGC
ATGCCACTACAGCGGTCTCAGGGTAATGCTCAGGAGTGCGAGATTTATAA
GGCCCTCGGGCAGCTTTCGCGCATTCAGACCGTTTACCTCGATCTTGACT
GCGATCCTCGGAGTTCGCCACAAGAGGACGAAATCCCAGGTCCCAGCTGC
CTCCGGGAGATTCTCATCAACTCCGCCATTGACGAAAGCCTCGTAACCGA
AATCTTTAAGCTTGTTTTCGTTCACCAGCAGACTCGCAAAATCAAGAACT
TGCGCGTCAATCTCGTGGGAGCAGATGGCTTTAGTCGAGAACTGGAACAT
GTGATCCGGCAGCTTGCTAGATCATTCCTTGTCACCCGAAATGACTTTTA
CCTCAATACGGATGAGCTAGTGGAGGTCAAGGAGATTGGGGGAGTCGCGT
GGCAATTGTGGCGTGAGGACGAGATTGGCTATTCGGGGCCCGTCCATATC
CCTCGGGATATCAAGGAGGTTTTGGAGGAGTTCTGGCCGTTGCAATCGGA
TAGGAATCGAAGTAAGAAGTGGAAGGAGTTTCCATTGCTGGTCCGAAGTT
TTCCCCTGGAGAGTATGCACTGAATGCCTACCGTAGATTGTCTGCCTGTG
GAAGTGCGACGACGGATTTGCCTTTCTGTCCGTGATTACTCATGGCATGA
TCTGTCCGCTCTAAGTCGAGCAAGCAAAGAATGGCATGATTTCGCAGCTA
CGGAGCTTTACAGGCACCTTCGACTGGCATTCTCCGACCGCACAGATCTT
CAGAATGACATGTCCGAGCTTCGCACAGATGGCCTTGGTCGTCAGTACCT
ACGATATGCACGAACCCTCGAACTCGTATGTCTGAAGAAGCCAGGGCTCG
AAACCAAAACAGCCAAATGTCTGTGGCAGCAGAAGAATTGGGCAAATGAA
TATGTCCTCTTCAACCCTTTAGCTTCAATGGACACACTCCTTCAGGACTC
ATTGTTGGAAACCCGTGACGTCTCACTCCAGTTCCTGACCTGGACCCTCG
CCTATTATCGGCAGGAGGACTGGGAGCCGATAATCGACCTCCTTTCGCGC
TTGCAGCATCTTCGGCTACTCAGCTACGCCGTGCTCAATATGTTTCCTAC
TTGCCTGTTCCAAGCGCTTCAACAGTTACACCCAGCCTGCCAATTGGATG
TCTGGACTTCCCAGTCTCCAACTCTTGACCTACCCGGTCTAGGACGCTCC
CACCGTTGCGTTGGTAAACAGTTCAAAGAGCCTTTTGACCTCAACATCCT
GCGTTCCTCAGCACTTCGTACCCTCAAGGCGGTCTATACAGTGGGCCAGG
ATCCTGAACAGGGATGGATACATAACGACGAGGCCTTCTCTTTCATCTTC
ACGGCCCCGAATCTTAAACATTTGCTCGTTGACGAGATGCCCGCCCGGCG
TGATAATCCGATTATGAAGGTCAAACGGGAATGGCAGGAGTTTGCCTCCC
AGGCGAAGCCTTCTCGTACCTCACCCTGCATAGATACCTTGACTTTCATC
AATGGCGATCCTCATCACCCACTGCGATCCCTTGATGTGGCCGTCAATTC
GGAGCCGGCTATGTTAAGTAAAGCAGCATCGATCCTCGGTCATTTGGAAC
GTCTGTATGTACATATGGTTCCCTGGAATAAGCAACGCATCACCGATTGG
TACAATGATCCCGAGGGTTCCACATGGGATGATGAAGAAATGATATCTGC
AGTGCAAGCATTCAGGCCGCTACGGTTTTTGTGCCTGCGGGGGTTGCGAA
ATTTTTCCTCTCTATCCCGCATTCTCTCCTCCCACCACTCCTTGGAGGGC
CTCAGTCTTGAGGGTTCCGATCGGCATCCGCGAACACCCCCAGATGGATT
CAAATACCCTATCTTCAATAGCGAACACATTCGGTCCATAGCCAAGTTAT
GCCCGCGACTCGAAGAGCTCCGCATGCCACTACAGCGGTCTCAGGGTAAT
GCTCAGGAGTGCGAGATTTATAAGGCCCTCGGGCAGCTTTCGCGCATTCA
GACCGTTTACCTCGATCTTGACTGCGATCCTCGGAGTTCGCCACAAGAGG
ACGAAATCCCAGGTCCCAGCTGCCTCCGGGAGATTCTCATCAACTCCGCC
ATTGACGAAAGCCTCGTAACCGAAATCTTTAAGCTTGTTTTCGTTCACCA
GCAGACTCGCAAAATCAAGAACTTGCGCGTCAATCTCGTGGGAGCAGATG
GCTTTAGTCGAGAACTGGAACATGTGATCCGGCAGCTTGCTAGATCATTC
CTTGTCACCCGAAATGACTTTTACCTCAATACGGATGAGCTAGTGGAGGT
CAAGGAGATTGGGGGAGTCGCGTGGCAATTGTGGCGTGAGGACGAGATTG
GCTATTCGGGGCCCGTCCATATCCCTCGGGATATCAAGGAGGTTTTGGAG
GAGTTCTGGCCGTTGCAATCGGATAGGAATCGAAGTAAGAAGTGGAAGGA
GTTTCCATTGCTGGTCCGAAGTTTTCCCCTGGAGAGTATGCACTGAATGC
CTACCGTAGATTGTCTGCCTGTGGAAGTGCGACGACGGATTTGCCTTTCT
GTCCGTGATTACTCATGGCATGATCTGTCCGCTCTAAGTCGAGCAAGCAA
AGAATGGCATGATTTCGCAGCTACGGAGCTTTACAGGCACCTTCGACTGG
CATTCTCCGACCGCACAGATCTTCAGAATGACATGTCCGAGCTTCGCACA
GATGGCCTTGGTCGTCAGTACCTACGATATGCACGAACCCTCGAACTCGT
ATGTCTGAAGAAGCCAGGGCTCGAAACCAAAACAGCCAAATGTCTGTGGC
AGCAGAAGAATTGGGCAAATGAATATGTCCTCTTCAACCCTTTAGCTTCA
ATGGACACACTCCTTCAGGACTCATTGTTGGAAACCCGTGACGTCTCACT
CCAGTTCCTGACCTGGACCCTCGCCTATTATCGGCAGGAGGACTGGGAGC
CGATAATCGACCTCCTTTCGCGCTTGCAGCATCTTCGGCTACTCAGCTAC
GCCGTGCTCAATATGTTTCCTACTTGCCTGTTCCAAGCGCTTCAACAGTT
ACACCCAGCCTGCCAATTGGATGTCTGGACTTCCCAGTCTCCAACTCTTG
ACCTACCCGGTCTAGGACGCTCCCACCGTTGCGTTGGTAAACAGTTCAAA
GAGCCTTTTGACCTCAACATCCTGCGTTCCTCAGCACTTCGTACCCTCAA
GGCGGTCTATACAGTGGGCCAGGATCCTGAACAGGGATGGATACATAACG
ACGAGGCCTTCTCTTTCATCTTCACGGCCCCGAATCTTAAACATTTGCTC
GTTGACGAGATGCCCGCCCGGCGTGATAATCCGATTATGAAGGTCAAACG
GGAATGGCAGGAGTTTGCCTCCCAGGCGAAGCCTTCTCGTACCTCACCCT
GCATAGATACCTTGACTTTCATCAATGGCGATCCTCATCACCCACTGCGA
TCCCTTGATGTGGCCGTCAATTCGGAGCCGGCTATGTTAAGTAAAGCAGC
ATCGATCCTCGGTCATTTGGAACGTCTGTATGTACATATGGTTCCCTGGA
ATAAGCAACGCATCACCGATTGGTACAATGATCCCGAGGGTTCCACATGG
GATGATGAAGAAATGATATCTGCAGTGCAAGCATTCAGGCCGCTACGGTT
TTTGTGCCTGCGGGGGTTGCGAAATTTTTCCTCTCTATCCCGCATTCTCT
CCTCCCACCACTCCTTGGAGGGCCTCAGTCTTGAGGGTTCCGATCGGCAT
CCGCGAACACCCCCAGATGGATTCAAATACCCTATCTTCAATAGCGAACA
CATTCGGTCCATAGCCAAGTTATGCCCGCGACTCGAAGAGCTCCGCATGC
CACTACAGCGGTCTCAGGGTAATGCTCAGGAGTGCGAGATTTATAAGGCC
CTCGGGCAGCTTTCGCGCATTCAGACCGTTTACCTCGATCTTGACTGCGA
TCCTCGGAGTTCGCCACAAGAGGACGAAATCCCAGGTCCCAGCTGCCTCC
GGGAGATTCTCATCAACTCCGCCATTGACGAAAGCCTCGTAACCGAAATC
TTTAAGCTTGTTTTCGTTCACCAGCAGACTCGCAAAATCAAGAACTTGCG
CGTCAATCTCGTGGGAGCAGATGGCTTTAGTCGAGAACTGGAACATGTGA
TCCGGCAGCTTGCTAGATCATTCCTTGTCACCCGAAATGACTTTTACCTC
AATACGGATGAGCTAGTGGAGGTCAAGGAGATTGGGGGAGTCGCGTGGCA
ATTGTGGCGTGAGGACGAGATTGGCTATTCGGGGCCCGTCCATATCCCTC
GGGATATCAAGGAGGTTTTGGAGGAGTTCTGGCCGTTGCAATCGGATAGG
AATCGAAGTAAGAAGTGGAAGGAGTTTCCATTGCTGGTCCGAAGTTTTCC
CCTGGAGAGTATGCACTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001563-T1.utr5p1 | KJC3_001563-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001563-T1.utr3p1 | KJC3_001563-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:75436..77572 + |
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