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KJC3_001564-T1, KJC3_001564-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001564-T1
Unique NameKJC3_001564-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:78998..80561-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001564-T1 ID=KJC3_001564-T1|Name=KJC3_001564-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1564bp|location=Sequence derived from alignment at ch2:78998..80561- (Aspergillus niger KJC3)
ACCATTTTAACGTAACTTATTTTCGTCAGCAACACAAAAATCCCCTCGAT
CAGGGTACGCGCGAAATCACCTTCGCAGAAACAACAACAATGTCTTTTCC
CTTTCAAATAATTGACCACATCATTCCCGGGCAGCACATCCGAGAGTACC
CACAAAGTACCCGGGGCAGACAAGAAACCCCTCACCAGCTCGCGATCAAA
CAATATATCCCTCTCGACCGCCCCGATCCAGTGCCTGACAACGCGATCAC
CATTATCGGGTCTCCTGGTAATGGCTCTCCGAAGGAAACCTACGAGCCCC
TCTGGGAGGACATCTACACCGAGTTGAAGCATAGAGGGGTGCCTCTGCGG
GGAATCTGGATGGCAGACACATCCAACCAGGGGGAAAGCGGGGTTCTCAA
TGAATATATTCAAGGCGATCGCAGTAGGTCAATGAAGTTCTGCTTGTGTG
CATCGATATGGCAAAGCGCTGGACTTGAGGCTAACTGATATAAATTCATG
TGACGTGCAGCAAATTGGTACGACCATTCCCGCGACCTCCTCCTGATGGT
CAACCAATTCCGCGATGAGATCCCTCGTCCGATCATCGGTGTTGCGCATG
GCATGGGCTGTGCACAACTGTAAGCCTCATCGCTCGGCCATGATTCTTTC
ACACCAAAACCTCTAACAAAGAGAACAGGGTTAATCTTTCGATCATCCAT
CCGCGCCTGCTGTCCACGCTCATCCTCTTCGAGCCCGTCATCATCGAGGC
TTCCTTCGGTGGTCCCAACCCAGCGCTTCCCGCTAGCCTCCGCCGAGACC
TTTGGCCGAATGCCGAAAGCGCCAAAGCATCATTATCGAAAGGCCTCCGA
AATTGGGATCCTCGTACGCGAGAAAGATACCTCCAATACGGGCTACGCAA
AGTCCCAACTGCACTATACCACCCTTCAGATCCAAAAGTTGGCGCCGAAG
CTGTGACGCTAAGAACAACAAAGCACCAAGAAGCGTGGAGCTTCTCTACG
ATGAACCTGGAATCCGAGCATCTGGACCGACTCTTGCTACCTGACTGGGA
TAGTGAACGGGAACGGCCGTATCTCTTTTCACGCCCGGAATGCTGGTCCG
CCATGAGAAATCTACCGTTTCTGAGACCGAGTGTCCTCTGGGTCTTTGGG
GAGAAGAGCTTCCTGTCTTTGCCGGACGCGCAGGACGTCAAGATGCGAGT
AACAGGAATCGGAGTGGGTGGTAGCGGTGGGGTTCAAACTGGAGCGGTAG
AAAAGGCTGTCCTGGTAGATGGGTCGCATACTCTCGTTTTTGAAAATGTC
GGATGGTGTGCAGAGACTGCGGCCGGATGGATTCGGAAGTGGTACGCCGG
CTGGTTGAAAGATGAAAATTTTTGGTCTGAGTACAGAAGCCGGCAGTCGG
ATCATGATATGTTAAGATTGTCAAAGGAAGCAGTCCAGGTGGCGAAAATG
CCAGTTGGAGCAAAGAGAGGAGAGGCTTGTAAACTGAAATTATAAATTGA
TGACACTAGAACTCTGCCACTGTCCTGTCCCATGTCTTCTGGGTAGACGT
GCGTCCAAGGAAAT
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Coding sequence (CDS) from alignment at ch2:78998..80561-

>KJC3_001564-T1 ID=KJC3_001564-T1|Name=KJC3_001564-T1|organism=Aspergillus niger KJC3|type=CDS|length=3780bp|location=Sequence derived from alignment at ch2:78998..80561- (Aspergillus niger KJC3)
GGTTAATCTTTCGATCATCCATCCGCGCCTGCTGTCCACGCTCATCCTCT
TCGAGCCCGTCATCATCGAGGCTTCCTTCGGTGGTCCCAACCCAGCGCTT
CCCGCTAGCCTCCGCCGAGACCTTTGGCCGAATGCCGAAAGCGCCAAAGC
ATCATTATCGAAAGGCCTCCGAAATTGGGATCCTCGTACGCGAGAAAGAT
ACCTCCAATACGGGCTACGCAAAGTCCCAACTGCACTATACCACCCTTCA
GATCCAAAAGTTGGCGCCGAAGCTGTGACGCTAAGAACAACAAAGCACCA
AGAAGCGTGGAGCTTCTCTACGATGAACCTGGAATCCGAGCATCTGGACC
GACTCTTGCTACCTGACTGGGATAGTGAACGGGAACGGCCGTATCTCTTT
TCACGCCCGGAATGCTGGTCCGCCATGAGAAATCTACCGTTTCTGAGACC
GAGTGTCCTCTGGGTCTTTGGGGAGAAGAGCTTCCTGTCTTTGCCGGACG
CGCAGGACGTCAAGATGCGAGTAACAGGAATCGGAGTGGGTGGTAGCGGT
GGGGTTCAAACTGGAGCGGTAGAAAAGGCTGTCCTGGTAGATGGGTCGCA
TACTCTCGTTTTTGAAAATGTCGGATGGTGTGCAGAGACTGCGGCCGGAT
GGATTCGGAAGTGGTACGCCGGCTGGTTGAAAGATGAAAATTTTTGGTCT
GAGTACAGAAGCCGGCAGTCGGATCATGATATGTTAAGATTGTCAAAGGA
AGCAGTCCAGGTGGCGAAAATGCCAGTTGGAGCAAAGAGAGGAGAGGCTT
GTAAACTGAAATTATAACAAATTGGTACGACCATTCCCGCGACCTCCTCC
TGATGGTCAACCAATTCCGCGATGAGATCCCTCGTCCGATCATCGGTGTT
GCGCATGGCATGGGCTGTGCACAACTATGTCTTTTCCCTTTCAAATAATT
GACCACATCATTCCCGGGCAGCACATCCGAGAGTACCCACAAAGTACCCG
GGGCAGACAAGAAACCCCTCACCAGCTCGCGATCAAACAATATATCCCTC
TCGACCGCCCCGATCCAGTGCCTGACAACGCGATCACCATTATCGGGTCT
CCTGGTAATGGCTCTCCGAAGGAAACCTACGAGCCCCTCTGGGAGGACAT
CTACACCGAGTTGAAGCATAGAGGGGTGCCTCTGCGGGGAATCTGGATGG
CAGACACATCCAACCAGGGGGAAAGCGGGGTTCTCAATGAATATATTCAA
GGCGATCGCAGGTTAATCTTTCGATCATCCATCCGCGCCTGCTGTCCACG
CTCATCCTCTTCGAGCCCGTCATCATCGAGGCTTCCTTCGGTGGTCCCAA
CCCAGCGCTTCCCGCTAGCCTCCGCCGAGACCTTTGGCCGAATGCCGAAA
GCGCCAAAGCATCATTATCGAAAGGCCTCCGAAATTGGGATCCTCGTACG
CGAGAAAGATACCTCCAATACGGGCTACGCAAAGTCCCAACTGCACTATA
CCACCCTTCAGATCCAAAAGTTGGCGCCGAAGCTGTGACGCTAAGAACAA
CAAAGCACCAAGAAGCGTGGAGCTTCTCTACGATGAACCTGGAATCCGAG
CATCTGGACCGACTCTTGCTACCTGACTGGGATAGTGAACGGGAACGGCC
GTATCTCTTTTCACGCCCGGAATGCTGGTCCGCCATGAGAAATCTACCGT
TTCTGAGACCGAGTGTCCTCTGGGTCTTTGGGGAGAAGAGCTTCCTGTCT
TTGCCGGACGCGCAGGACGTCAAGATGCGAGTAACAGGAATCGGAGTGGG
TGGTAGCGGTGGGGTTCAAACTGGAGCGGTAGAAAAGGCTGTCCTGGTAG
ATGGGTCGCATACTCTCGTTTTTGAAAATGTCGGATGGTGTGCAGAGACT
GCGGCCGGATGGATTCGGAAGTGGTACGCCGGCTGGTTGAAAGATGAAAA
TTTTTGGTCTGAGTACAGAAGCCGGCAGTCGGATCATGATATGTTAAGAT
TGTCAAAGGAAGCAGTCCAGGTGGCGAAAATGCCAGTTGGAGCAAAGAGA
GGAGAGGCTTGTAAACTGAAATTATAACAAATTGGTACGACCATTCCCGC
GACCTCCTCCTGATGGTCAACCAATTCCGCGATGAGATCCCTCGTCCGAT
CATCGGTGTTGCGCATGGCATGGGCTGTGCACAACTATGTCTTTTCCCTT
TCAAATAATTGACCACATCATTCCCGGGCAGCACATCCGAGAGTACCCAC
AAAGTACCCGGGGCAGACAAGAAACCCCTCACCAGCTCGCGATCAAACAA
TATATCCCTCTCGACCGCCCCGATCCAGTGCCTGACAACGCGATCACCAT
TATCGGGTCTCCTGGTAATGGCTCTCCGAAGGAAACCTACGAGCCCCTCT
GGGAGGACATCTACACCGAGTTGAAGCATAGAGGGGTGCCTCTGCGGGGA
ATCTGGATGGCAGACACATCCAACCAGGGGGAAAGCGGGGTTCTCAATGA
ATATATTCAAGGCGATCGCAGGTTAATCTTTCGATCATCCATCCGCGCCT
GCTGTCCACGCTCATCCTCTTCGAGCCCGTCATCATCGAGGCTTCCTTCG
GTGGTCCCAACCCAGCGCTTCCCGCTAGCCTCCGCCGAGACCTTTGGCCG
AATGCCGAAAGCGCCAAAGCATCATTATCGAAAGGCCTCCGAAATTGGGA
TCCTCGTACGCGAGAAAGATACCTCCAATACGGGCTACGCAAAGTCCCAA
CTGCACTATACCACCCTTCAGATCCAAAAGTTGGCGCCGAAGCTGTGACG
CTAAGAACAACAAAGCACCAAGAAGCGTGGAGCTTCTCTACGATGAACCT
GGAATCCGAGCATCTGGACCGACTCTTGCTACCTGACTGGGATAGTGAAC
GGGAACGGCCGTATCTCTTTTCACGCCCGGAATGCTGGTCCGCCATGAGA
AATCTACCGTTTCTGAGACCGAGTGTCCTCTGGGTCTTTGGGGAGAAGAG
CTTCCTGTCTTTGCCGGACGCGCAGGACGTCAAGATGCGAGTAACAGGAA
TCGGAGTGGGTGGTAGCGGTGGGGTTCAAACTGGAGCGGTAGAAAAGGCT
GTCCTGGTAGATGGGTCGCATACTCTCGTTTTTGAAAATGTCGGATGGTG
TGCAGAGACTGCGGCCGGATGGATTCGGAAGTGGTACGCCGGCTGGTTGA
AAGATGAAAATTTTTGGTCTGAGTACAGAAGCCGGCAGTCGGATCATGAT
ATGTTAAGATTGTCAAAGGAAGCAGTCCAGGTGGCGAAAATGCCAGTTGG
AGCAAAGAGAGGAGAGGCTTGTAAACTGAAATTATAACAAATTGGTACGA
CCATTCCCGCGACCTCCTCCTGATGGTCAACCAATTCCGCGATGAGATCC
CTCGTCCGATCATCGGTGTTGCGCATGGCATGGGCTGTGCACAACTATGT
CTTTTCCCTTTCAAATAATTGACCACATCATTCCCGGGCAGCACATCCGA
GAGTACCCACAAAGTACCCGGGGCAGACAAGAAACCCCTCACCAGCTCGC
GATCAAACAATATATCCCTCTCGACCGCCCCGATCCAGTGCCTGACAACG
CGATCACCATTATCGGGTCTCCTGGTAATGGCTCTCCGAAGGAAACCTAC
GAGCCCCTCTGGGAGGACATCTACACCGAGTTGAAGCATAGAGGGGTGCC
TCTGCGGGGAATCTGGATGGCAGACACATCCAACCAGGGGGAAAGCGGGG
TTCTCAATGAATATATTCAAGGCGATCGCA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001564KJC3_001564Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001564-T1KJC3_001564-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001564-T1.cdsKJC3_001564-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001564-T1.utr3p1KJC3_001564-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001564-T1.exon3KJC3_001564-T1.exon3Aspergillus niger KJC3exon
KJC3_001564-T1.exon2KJC3_001564-T1.exon2Aspergillus niger KJC3exon
KJC3_001564-T1.exon1KJC3_001564-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001564-T1.utr5p1KJC3_001564-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR029058
DBxrefInterPro:IPR000073
DBxrefPFAM:PF12697
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:78998..80561 -
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