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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:127575..129588- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001588-T2 ID=KJC3_001588-T2|Name=KJC3_001588-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2014bp|location=Sequence derived from alignment at ch2:127575..129588- (Aspergillus niger KJC3)
CCCGGATTGCTTGCCCTTTTCAGCCAGCAATCTCAAATACTCGTCCATCC
CATTCGTGTAGCTTCGTCCAAGCACCTGCCCGACATCCTCGTGAGATCTA
TCCCACTGGTCTGGGACAGTGCGCAGGACGCCATCTGTCCCTAGTCTGGG
GCTCGATCGCCACTATGTCGCCCTCCAAGCAGTCTGGTATGTGCGTCGTC
TCCATACCAAGTTTTCCTCGCTTCTTCTGTAGCCCAATGAATGCCTCTCT
TACCTCTTCCGTACTATAGTCGCCATGGCGGACATGCCCTTCATCGTCTC
CACCGGCACCAAGAAGGTCGATCCCCGTACCCGCAAACTCATTCGCAGCC
ATGTCATGATTGGCAAAAACCGTGGCAAATCCCGCTATCGCCAAGCAGAA
GCCGATCCATCGACACCGGCGGACACGAGCACAGACGATACTTCGGCTCC
TCCTGCCGATGGGGCGGGTTCATCATCCACATCGCCTGCGGCACAAGTGC
CAGCCACCCGCTTGCCGTTAAATCTTCCCCGCAGAGTCGGCAACGACATG
TCCCTCATCCGGCTGGCTGATGACACCACTAGCCCAGCAGCCCTAGCCAC
TATTCTTCGCTGTAGGTGCCGCGTCCCTGATTCCCACCTGCCGGTGATTC
GATGGGGCCCACTAAAAGAGTAAACCTCCATAGTCACCGACCGGGCAAAG
ATGGAGTTCTACCCCCTTGCCGTATGCATCGTATTCAACAAGTCTAGTCG
ATCCTGGATTCTTGACATGCTGTCACTAGATGCGGCCTATCTCAACGCCA
TGGTCATCACTACCCAATCATACTTTGGGATCTACAAGGGTCCCGATGCG
GCCCAATCCCCTCATCTGGGGAAAGCAATCCGCCTGTTACGCAACCGGCT
CGAAGACGAGCAGGTTCGCGTGTCCAATGCAACCGTAATGGTCGTCATTA
TCCTCATCCTGCACGCGCATATCGTCAGTGATTATGCTGCCGTACAACAT
CACACCCAGGGTCTCCGCAAGATGGTCCGTCTGCGCGGGGGCTTGGGGGC
GTTCACATCCAATAACAAACTGGTCATTGATCTTATCCGGTGGGTCCTTT
CCCCTGTCCGTTACTTTCCTCCTACTTTCCTTGCCGGTTATTATATTCCC
CTTTCGTATTAGACTACATACTTGCTTGCAACCTAACCCTGTGATCAGAT
GCGATGTGGGACTAGCGATCCACAGTGGAGACAAACCCGCGTTTTTCGAG
AACCGTGATCTCGACATCTTCGTCCCTTCCGAACTCTGCTTCACGGCGCG
CTCTCGTCCCGACCCGTCGTTCGTCCGGGAGCTTGACCCCGGTCTTGCTC
GGATCTGGCACATTATGCAGGGATTCTGTGCCCAGGTCAACCTGACCACC
AAGACGAACGGCATGATCCCCGAGACCGATTTCATGAAAACAATGGCCTC
CGTCATGTACCCTCTGTTACACATGAGCTTTGATCCCGGGTCCCGTGACG
AGGCGATTCGTCTAGCTTTACTCAGCTACGGATTCGACATCTTCCTGCAG
TTCCGCAGCGACCCCACTCCGTACGTCCACCTGGCTGCCTCGTACCAGCG
CTGTCTCAATGGTTTAGCCAAGCGAGATGATGTGTCCCCGCAACTGTGGA
TCTGGCTGTTAACCGTCGGTGGTCTTGTGGTGTTTTTACCTGCCGTCAGG
CGGAATTTCCGGCACTGGCTGCTGTATTACCTGGGGAGCTGTCGAGTTCG
CTCGTGGGAGGAGATGCGGGCCATTCTCTCTTCTTTCATTTGGATCGGAC
TTGTGCATGATAAAGGAGGAAAAGAGATCTTTGATACGTTGTTTGCCAAC
CTGGAGCCGGGGGCGGAGACATTTGTTGATCAGACGTCTTCGTCGAAATT
AATCACCTGTTAGAGGTGTTACGATTTATGTGAACTGGTATTGTTTAAGG
TTCGAAAATGGATATAGGGCACAAATACTATATATTGATACATACACTAC
TGTTCTAGTCTGCG back to topCoding sequence (CDS) from alignment at ch2:127575..129588- >KJC3_001588-T2 ID=KJC3_001588-T2|Name=KJC3_001588-T2|organism=Aspergillus niger KJC3|type=CDS|length=2208bp|location=Sequence derived from alignment at ch2:127575..129588- (Aspergillus niger KJC3)
ATGCGATGTGGGACTAGCGATCCACAGTGGAGACAAACCCGCGTTTTTCG
AGAACCGTGATCTCGACATCTTCGTCCCTTCCGAACTCTGCTTCACGGCG
CGCTCTCGTCCCGACCCGTCGTTCGTCCGGGAGCTTGACCCCGGTCTTGC
TCGGATCTGGCACATTATGCAGGGATTCTGTGCCCAGGTCAACCTGACCA
CCAAGACGAACGGCATGATCCCCGAGACCGATTTCATGAAAACAATGGCC
TCCGTCATGTACCCTCTGTTACACATGAGCTTTGATCCCGGGTCCCGTGA
CGAGGCGATTCGTCTAGCTTTACTCAGCTACGGATTCGACATCTTCCTGC
AGTTCCGCAGCGACCCCACTCCGTACGTCCACCTGGCTGCCTCGTACCAG
CGCTGTCTCAATGGTTTAGCCAAGCGAGATGATGTGTCCCCGCAACTGTG
GATCTGGCTGTTAACCGTCGGTGGTCTTGTGGTGTTTTTACCTGCCGTCA
GGCGGAATTTCCGGCACTGGCTGCTGTATTACCTGGGGAGCTGTCGAGTT
CGCTCGTGGGAGGAGATGCGGGCCATTCTCTCTTCTTTCATTTGGATCGG
ACTTGTGCATGATAAAGGAGGAAAAGAGATCTTTGATACGTTGTTTGCCA
ACCTGGAGCCGGGGGCGGAGACATTTGTTGATCAGACGTCTTCGTCGAAA
TTAATCACCTGTTAGATGGAGTTCTACCCCCTTGCCGTATGCATCGTATT
CAACAAGTCTAGTCGATCCTGGATTCTTGACATGCTGTCACTAGATGCGG
CCTATCTCAACGCCATGGTCATCACTACCCAATCATACTTTGGGATCTAC
AAGGGTCCCGATGCGGCCCAATCCCCTCATCTGGGGAAAGCAATCCGCCT
GTTACGCAACCGGCTCGAAGACGAGCAGGTTCGCGTGTCCAATGCAACCG
TAATGGTCGTCATTATCCTCATCCTGCACGCGCATATCGTCAGTGATTAT
GCTGCCGTACAACATCACACCCAGGGTCTCCGCAAGATGGTCCGTCTGCG
CGGGGGCTTGGGGGCGTTCACATCCAATAACAAACTGGTCATTGATCTTA
TCCGATGCGATGTGGGACTAGCGATCCACAGTGGAGACAAACCCGCGTTT
TTCGAGAACCGTGATCTCGACATCTTCGTCCCTTCCGAACTCTGCTTCAC
GGCGCGCTCTCGTCCCGACCCGTCGTTCGTCCGGGAGCTTGACCCCGGTC
TTGCTCGGATCTGGCACATTATGCAGGGATTCTGTGCCCAGGTCAACCTG
ACCACCAAGACGAACGGCATGATCCCCGAGACCGATTTCATGAAAACAAT
GGCCTCCGTCATGTACCCTCTGTTACACATGAGCTTTGATCCCGGGTCCC
GTGACGAGGCGATTCGTCTAGCTTTACTCAGCTACGGATTCGACATCTTC
CTGCAGTTCCGCAGCGACCCCACTCCGTACGTCCACCTGGCTGCCTCGTA
CCAGCGCTGTCTCAATGGTTTAGCCAAGCGAGATGATGTGTCCCCGCAAC
TGTGGATCTGGCTGTTAACCGTCGGTGGTCTTGTGGTGTTTTTACCTGCC
GTCAGGCGGAATTTCCGGCACTGGCTGCTGTATTACCTGGGGAGCTGTCG
AGTTCGCTCGTGGGAGGAGATGCGGGCCATTCTCTCTTCTTTCATTTGGA
TCGGACTTGTGCATGATAAAGGAGGAAAAGAGATCTTTGATACGTTGTTT
GCCAACCTGGAGCCGGGGGCGGAGACATTTGTTGATCAGACGTCTTCGTC
GAAATTAATCACCTGTTAGATGGAGTTCTACCCCCTTGCCGTATGCATCG
TATTCAACAAGTCTAGTCGATCCTGGATTCTTGACATGCTGTCACTAGAT
GCGGCCTATCTCAACGCCATGGTCATCACTACCCAATCATACTTTGGGAT
CTACAAGGGTCCCGATGCGGCCCAATCCCCTCATCTGGGGAAAGCAATCC
GCCTGTTACGCAACCGGCTCGAAGACGAGCAGGTTCGCGTGTCCAATGCA
ACCGTAATGGTCGTCATTATCCTCATCCTGCACGCGCATATCGTCAGTGA
TTATGCTGCCGTACAACATCACACCCAGGGTCTCCGCAAGATGGTCCGTC
TGCGCGGGGGCTTGGGGGCGTTCACATCCAATAACAAACTGGTCATTGAT
CTTATCCG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001588-T2.utr3p1 | KJC3_001588-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR021858 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:127575..129588 - |
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