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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:170195..171441- Legend: CDSpolypeptideexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001601-T1 ID=KJC3_001601-T1|Name=KJC3_001601-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1247bp|location=Sequence derived from alignment at ch2:170195..171441- (Aspergillus niger KJC3)
ATGGTTTTTTGCCTTCGCCACCGAAAGTATCCAGCCAAGCGTCCATCACC
ACAGGGCAGTAGTGCCCCTCCAAAAAAGCCATCCGAAGCCGAGATTAAAA
CTTGGTACCGAGTCGCGCTCGACAAGATCGTTGCCGCCCGTCTCGAGCAA
GAATCCAGTACTGCGCAGGGGGAACCAATCTTCCTGTCTCACTACATCAG
CCAAGGTCAATTCCGGCACTGGGTCATGCACACTTATGGCCATAAGTACG
AATTACGCCAGCGACGAGATAGCGACGGCGGGTACGCGGCGAAAATTAGC
TCGTCCAGCTTGGACCTTAACACGTACAGATACTCGCTCTTGGCGAGCTA
CTCGCCTCGAGTCGGCAGCTACTTTTACAGCATGATCGGCTGGACCACGC
TGCCCAAGGAACGGATCGACGAGCATAGTCGGCAACTCTCAGCCTCGTTT
GGGACATACGGCCTGCTGCGGAATAACTGCCACGACTTCCTGCAGCGACT
GGCCGATACGATTGTGACTACGAGGGCGCCGGATTGGGCGTGGTTCCGAT
ATAATACCGTGAGCAATTATCATTATATCCTTGCGTCGCCGCTGGATTAT
TGGACTATAAGTGCTGGTACGTGGCTCAAACATCTTGAGCAATCAAGGCA
TTATCTCGGCGGGCAAGACAGACAGAGGGTGGATGAACTTATGGTCGTAC
TCGAGGATCTTATCGAAGAACGCATGAAACGCTCATCAAATCAGTTATGG
AATATATCAAACCCCGGAGGCGCTGACGGCAGTGGGCATGGTGGGCATGG
TGGGCATGGTGGGCATGGTGGGCATGGCGGGCATGGGGGAGATGGCGGGC
ATGGTGGTGGGCATGGGGGAGATGGCGGCGGTGGTGGAGATGGCGGCGGT
GGTGGCGGAGGATAAGACTCTTTTAGACTGGCTGACGGTCAGGTCAAGTC
GGGTTAATAGCAAGTTTTATACCTTCCGGCAGGCAAACGGTCTGGTTATA
TATTTGAATACCTGAATGGATTAACCTGACCCACAGCTTTCTACTCCGCT
ATAGTAGATGTTGACAATAGTTTAGGGAAACCTTCATATTTACTTCTTTT
TTATTGGTTAAAGTATCCAGCTTTATCAGGTCCCGGCAGTATAAGAAAGA
ATTTATTTTTATATAGCTAGAGATACGACTTGTGGTAATTTGTAAGCAAT
ACTAATAGTTATAAGGTCTGGCTTAGGGGATTATCTGTTATGCTTGC back to topCoding sequence (CDS) from alignment at ch2:170195..171441- >KJC3_001601-T1 ID=KJC3_001601-T1|Name=KJC3_001601-T1|organism=Aspergillus niger KJC3|type=CDS|length=915bp|location=Sequence derived from alignment at ch2:170195..171441- (Aspergillus niger KJC3)
ATGGTTTTTTGCCTTCGCCACCGAAAGTATCCAGCCAAGCGTCCATCACC
ACAGGGCAGTAGTGCCCCTCCAAAAAAGCCATCCGAAGCCGAGATTAAAA
CTTGGTACCGAGTCGCGCTCGACAAGATCGTTGCCGCCCGTCTCGAGCAA
GAATCCAGTACTGCGCAGGGGGAACCAATCTTCCTGTCTCACTACATCAG
CCAAGGTCAATTCCGGCACTGGGTCATGCACACTTATGGCCATAAGTACG
AATTACGCCAGCGACGAGATAGCGACGGCGGGTACGCGGCGAAAATTAGC
TCGTCCAGCTTGGACCTTAACACGTACAGATACTCGCTCTTGGCGAGCTA
CTCGCCTCGAGTCGGCAGCTACTTTTACAGCATGATCGGCTGGACCACGC
TGCCCAAGGAACGGATCGACGAGCATAGTCGGCAACTCTCAGCCTCGTTT
GGGACATACGGCCTGCTGCGGAATAACTGCCACGACTTCCTGCAGCGACT
GGCCGATACGATTGTGACTACGAGGGCGCCGGATTGGGCGTGGTTCCGAT
ATAATACCGTGAGCAATTATCATTATATCCTTGCGTCGCCGCTGGATTAT
TGGACTATAAGTGCTGGTACGTGGCTCAAACATCTTGAGCAATCAAGGCA
TTATCTCGGCGGGCAAGACAGACAGAGGGTGGATGAACTTATGGTCGTAC
TCGAGGATCTTATCGAAGAACGCATGAAACGCTCATCAAATCAGTTATGG
AATATATCAAACCCCGGAGGCGCTGACGGCAGTGGGCATGGTGGGCATGG
TGGGCATGGTGGGCATGGTGGGCATGGCGGGCATGGGGGAGATGGCGGGC
ATGGTGGTGGGCATGGGGGAGATGGCGGCGGTGGTGGAGATGGCGGCGGT
GGTGGCGGAGGATAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001601-T1.utr3p1 | KJC3_001601-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR008580 |
| DBxref | PFAM:PF05903 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:170195..171441 - |
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