You are here

Home

KJC3_001651-T1, KJC3_001651-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001651-T1
Unique NameKJC3_001651-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:294811..296290+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001651-T1 ID=KJC3_001651-T1|Name=KJC3_001651-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1480bp|location=Sequence derived from alignment at ch2:294811..296290+ (Aspergillus niger KJC3)
CCGCAACAACACCTCCGTTCTCTTTCTATAACTCACCTTACCACTCTAAG
GATACTGGCTGGTCCCTCAAGGCCTCTAATTGGATCAGGTACTTTATCAT
CTGCCAACATCATCCCCGCCTACTGTCTATCCAAGCACTCCCTTCCCAAG
CTCACTTCGCTGCATGGATCGGCAATGTCGTACATCGCTAGGACTTTATC
ACGTATTCGAGCCCATTTGTCCCGGCCGAGTGCTAAGCCGGAAGAGAATG
ACTATGCAATGACTGTAGGTGCTAGCATCAGTGGAATTGTCTGGACGCTC
TACTTCAAAGCATATGAGTCAACCAACGATCACCTCTTACCGCACGATCT
GGTGGCCTGGGGTATTATTGTTCGACCTTTCGATATCGCGTCTCCTGAAG
CAGTCATGAATACAGAAGCCTCACACACGAACCCAGCATCATACTTCCAG
CCACTTCCCGAGTCTTTTCTTCAGAGCCATCCCGTGGTTATTTCCAGCGA
AGTACAGAAGGATTTTGAACGTTTCGAACACGAGCTGGCGCCCGAGTACC
CTGGTTGGGGCAATAAGCCAGGAACCAAGGGGATCTCGCTAAGCTCCAGA
ATGGAAACATTCGCAAATTTCCTCGAGTTCCAACTTCATTGGCCCAGGGC
GGGGTTTCCCAGGGAGGTGTCTCTCAGGTCTGCCACGAGATGGCGTGAGC
CAGGGTATTTTCTTGGATGTTCACAATTTATAAGACTACACAGGTACTGA
CAGCTTTAACCCATAGGGAATTCCGAATGATGTTCCCCAGGCACGCACTT
CCCCCTAAGCGCGTAGATTGGAGCTTGCGTAGTGTCCATTTATGCTACAC
GCAGCCGAGGTTCCCGCATGTCAAAGCCATAATGAGTCACGGAACAGACG
CACATCCGGATTTACTGCTGCGTGGCGAGTTGATGATGATAGCAGCTGTG
ATGCATACCATGCTGCTTAATGAGAGTTATCTCGACCATGTCATCATGCC
GGTGAGTTTAATTTACGTTTGTTCTCACCAATCTATCCTCTACTATCTGC
TCATGCGCCCTTCACGTACTAGGTAATGCTGTTTTCGTTTGTGGGTCCAT
CACATGTACGAATCTTGATAGCGATCCACGATGGAAGCGTGCTCAGAATC
TCAAAGTCGGACGTACTGCAATGCTCTCCAAGTTCTCGGGATGTTTGGGA
TTTGTTAGTTCGATACTACGCAGGCGGCAACAATCCTAAGATGAGCACAA
CCAAATTGCCGGACGAGGATCTAGAATCAGTTGTTGCTTGACGCCAATAG
GAAGGGAAGATGGAATTAATTTAGAGAGCACAAAGGCCGGACAACTTCCT
CTTATCGCTGACATCACCTCTATAGTGAAGGATAGTAGCAGATTAATGAG
TTTCTAGGCGGTGGTACCTGCTACAGAGACATATGTCGATCATTGTCTCA
TCCTTTCGGTGCATCTGTTAGTACCTAGAC
back to top

Coding sequence (CDS) from alignment at ch2:294811..296290+

>KJC3_001651-T1 ID=KJC3_001651-T1|Name=KJC3_001651-T1|organism=Aspergillus niger KJC3|type=CDS|length=2952bp|location=Sequence derived from alignment at ch2:294811..296290+ (Aspergillus niger KJC3)
ATGTCGTACATCGCTAGGACTTTATCACGTATTCGAGCCCATTTGTCCCG
GCCGAGTGCTAAGCCGGAAGAGAATGACTATGCAATGACTGTAGGTGCTA
GCATCAGTGGAATTGTCTGGACGCTCTACTTCAAAGCATATGAGTCAACC
AACGATCACCTCTTACCGCACGATCTGGTGGCCTGGGGTATTATTGTTCG
ACCTTTCGATATCGCGTCTCCTGAAGCAGTCATGAATACAGAAGCCTCAC
ACACGAACCCAGCATCATACTTCCAGCCACTTCCCGAGTCTTTTCTTCAG
AGCCATCCCGTGGTTATTTCCAGCGAAGTACAGAAGGATTTTGAACGTTT
CGAACACGAGCTGGCGCCCGAGTACCCTGGTTGGGGCAATAAGCCAGGAA
CCAAGGGGATCTCGCTAAGCTCCAGAATGGAAACATTCGCAAATTTCCTC
GAGTTCCAACTTCATTGGCCCAGGGCGGGGTTTCCCAGGGAGGTGTCTCT
CAGGTCTGCCACGAGATGGCGTGAGCCAGGGGAATTCCGAATGATGTTCC
CCAGGCACGCACTTCCCCCTAAGCGCGTAGATTGGAGCTTGCGTAGTGTC
CATTTATGCTACACGCAGCCGAGGTTCCCGCATGTCAAAGCCATAATGAG
TCACGGAACAGACGCACATCCGGATTTACTGCTGCGTGGCGAGTTGATGA
TGATAGCAGCTGTGATGCATACCATGCTGCTTAATGAGAGTTATCTCGAC
CATGTCATCATGCCGGTAATGCTGTTTTCGTTTGTGGGTCCATCACATGT
ACGAATCTTGATAGCGATCCACGATGGAAGCGTGCTCAGAATCTCAAAGT
CGGACGTACTGCAATGCTCTCCAAGTTCTCGGGATGTTTGGGATTTGTTA
GTTCGATACTACGCAGGCGGCAACAATCCTAAGATGAGCACAACCAAATT
GCCGGACGAGGATCTAGAATCAGTTGTTGCTTGAATGTCGTACATCGCTA
GGACTTTATCACGTATTCGAGCCCATTTGTCCCGGCCGAGTGCTAAGCCG
GAAGAGAATGACTATGCAATGACTGTAGGTGCTAGCATCAGTGGAATTGT
CTGGACGCTCTACTTCAAAGCATATGAGTCAACCAACGATCACCTCTTAC
CGCACGATCTGGTGGCCTGGGGTATTATTGTTCGACCTTTCGATATCGCG
TCTCCTGAAGCAGTCATGAATACAGAAGCCTCACACACGAACCCAGCATC
ATACTTCCAGCCACTTCCCGAGTCTTTTCTTCAGAGCCATCCCGTGGTTA
TTTCCAGCGAAGTACAGAAGGATTTTGAACGTTTCGAACACGAGCTGGCG
CCCGAGTACCCTGGTTGGGGCAATAAGCCAGGAACCAAGGGGATCTCGCT
AAGCTCCAGAATGGAAACATTCGCAAATTTCCTCGAGTTCCAACTTCATT
GGCCCAGGGCGGGGTTTCCCAGGGAGGTGTCTCTCAGGTCTGCCACGAGA
TGGCGTGAGCCAGGGGAATTCCGAATGATGTTCCCCAGGCACGCACTTCC
CCCTAAGCGCGTAGATTGGAGCTTGCGTAGTGTCCATTTATGCTACACGC
AGCCGAGGTTCCCGCATGTCAAAGCCATAATGAGTCACGGAACAGACGCA
CATCCGGATTTACTGCTGCGTGGCGAGTTGATGATGATAGCAGCTGTGAT
GCATACCATGCTGCTTAATGAGAGTTATCTCGACCATGTCATCATGCCGG
TAATGCTGTTTTCGTTTGTGGGTCCATCACATGTACGAATCTTGATAGCG
ATCCACGATGGAAGCGTGCTCAGAATCTCAAAGTCGGACGTACTGCAATG
CTCTCCAAGTTCTCGGGATGTTTGGGATTTGTTAGTTCGATACTACGCAG
GCGGCAACAATCCTAAGATGAGCACAACCAAATTGCCGGACGAGGATCTA
GAATCAGTTGTTGCTTGAATGTCGTACATCGCTAGGACTTTATCACGTAT
TCGAGCCCATTTGTCCCGGCCGAGTGCTAAGCCGGAAGAGAATGACTATG
CAATGACTGTAGGTGCTAGCATCAGTGGAATTGTCTGGACGCTCTACTTC
AAAGCATATGAGTCAACCAACGATCACCTCTTACCGCACGATCTGGTGGC
CTGGGGTATTATTGTTCGACCTTTCGATATCGCGTCTCCTGAAGCAGTCA
TGAATACAGAAGCCTCACACACGAACCCAGCATCATACTTCCAGCCACTT
CCCGAGTCTTTTCTTCAGAGCCATCCCGTGGTTATTTCCAGCGAAGTACA
GAAGGATTTTGAACGTTTCGAACACGAGCTGGCGCCCGAGTACCCTGGTT
GGGGCAATAAGCCAGGAACCAAGGGGATCTCGCTAAGCTCCAGAATGGAA
ACATTCGCAAATTTCCTCGAGTTCCAACTTCATTGGCCCAGGGCGGGGTT
TCCCAGGGAGGTGTCTCTCAGGTCTGCCACGAGATGGCGTGAGCCAGGGG
AATTCCGAATGATGTTCCCCAGGCACGCACTTCCCCCTAAGCGCGTAGAT
TGGAGCTTGCGTAGTGTCCATTTATGCTACACGCAGCCGAGGTTCCCGCA
TGTCAAAGCCATAATGAGTCACGGAACAGACGCACATCCGGATTTACTGC
TGCGTGGCGAGTTGATGATGATAGCAGCTGTGATGCATACCATGCTGCTT
AATGAGAGTTATCTCGACCATGTCATCATGCCGGTAATGCTGTTTTCGTT
TGTGGGTCCATCACATGTACGAATCTTGATAGCGATCCACGATGGAAGCG
TGCTCAGAATCTCAAAGTCGGACGTACTGCAATGCTCTCCAAGTTCTCGG
GATGTTTGGGATTTGTTAGTTCGATACTACGCAGGCGGCAACAATCCTAA
GATGAGCACAACCAAATTGCCGGACGAGGATCTAGAATCAGTTGTTGCTT
GA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001651KJC3_001651Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001651-T1KJC3_001651-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001651-T1.utr5p1KJC3_001651-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001651-T1.exon1KJC3_001651-T1.exon1Aspergillus niger KJC3exon
KJC3_001651-T1.exon2KJC3_001651-T1.exon2Aspergillus niger KJC3exon
KJC3_001651-T1.exon3KJC3_001651-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001651-T1.cdsKJC3_001651-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001651-T1.utr3p1KJC3_001651-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:294811..296290 +
Powered by Drupal