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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:337816..338743+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001668-T1 ID=KJC3_001668-T1|Name=KJC3_001668-T1|organism=Aspergillus niger KJC3|type=mRNA|length=928bp|location=Sequence derived from alignment at ch2:337816..338743+ (Aspergillus niger KJC3)
ATGCAGAGACGCTACCGGAAGAAGAGGCAGCCCAAGTCTCGCCAGGTGAG
TACGAGCCTCTTAGATGGACTGATCGGAGTTACCTAGCACTCCTCAGAGC
GACTTCCTCATATGCAATCCGGTAGCAGTGTAACTGACCGATTCAACCTT
CAACCAGGGCACGCCCGAGAGCCTCCACACGGAGGAAAAGCACAGTGATT
GTCGCAGCTCTCTGTCTAGTCGCGAAACAGATGGAACCTCCACTTCATCT
CCCCCAAAGCCGGCACAGGCAGGCTCCGTCCCAAGCCGCCGATTTAACCT
GGACGAGCTATACCCAAAACACTTCACTTTGAGCGACATCGAGGTTCCAG
CACACAACATGGTCTTTCTCGCTTGCCCAGGCTCGGAAAGAAAATGCCCC
CACTGCAAACGCCACACGCGTCACCTGGGCTGTATCGTGATTGCCATAGA
TGGAGCGTGCCGCAATAATGGCAGATACGGAGCCCGGGCGTCAACTGGGG
TCTACCACGGCCACGACCATCCCTTAAACGGAAGTGCCAGTCTTTCCCCC
AATCTCAAGCAAACAAGCCAGGTCGCCGAACTCGCGGCCTGCGAGAGGGC
TCTGCTTGGTGCGTACGTCATGCAAAAGTGCTGGGATGGATTATCCGAAA
TGACAGGAGATGGAGAAGAAAGGCTTCACACCGTGGTGATCAAGTCAGAC
TCGGAGTATGTGGTGCGCGGAATGACCGAATGGATCTTCAAATGGAAAGC
CAATGATTGGACTACCGCGAAGGGCTTGCCCGTCGCCAATCAAGAGCACT
TTAAGAAGATTGATTCTCTTGTCGAATCTCTTGAAAATGAGCAGGTCCCT
GTCCAGTTCTGGCAGGTTCCGAGAGAATTTAACCAGGAGGCGGATAGGCT
GGCAGCGTCTGCTCTGGATGATGATTGA back to topCoding sequence (CDS) from alignment at ch2:337816..338743+ >KJC3_001668-T1 ID=KJC3_001668-T1|Name=KJC3_001668-T1|organism=Aspergillus niger KJC3|type=CDS|length=1632bp|location=Sequence derived from alignment at ch2:337816..338743+ (Aspergillus niger KJC3)
ATGCAGAGACGCTACCGGAAGAAGAGGCAGCCCAAGTCTCGCCAGGGCAC
GCCCGAGAGCCTCCACACGGAGGAAAAGCACAGTGATTGTCGCAGCTCTC
TGTCTAGTCGCGAAACAGATGGAACCTCCACTTCATCTCCCCCAAAGCCG
GCACAGGCAGGCTCCGTCCCAAGCCGCCGATTTAACCTGGACGAGCTATA
CCCAAAACACTTCACTTTGAGCGACATCGAGGTTCCAGCACACAACATGG
TCTTTCTCGCTTGCCCAGGCTCGGAAAGAAAATGCCCCCACTGCAAACGC
CACACGCGTCACCTGGGCTGTATCGTGATTGCCATAGATGGAGCGTGCCG
CAATAATGGCAGATACGGAGCCCGGGCGTCAACTGGGGTCTACCACGGCC
ACGACCATCCCTTAAACGGAAGTGCCAGTCTTTCCCCCAATCTCAAGCAA
ACAAGCCAGGTCGCCGAACTCGCGGCCTGCGAGAGGGCTCTGCTTGGTGC
GTACGTCATGCAAAAGTGCTGGGATGGATTATCCGAAATGACAGGAGATG
GAGAAGAAAGGCTTCACACCGTGGTGATCAAGTCAGACTCGGAGTATGTG
GTGCGCGGAATGACCGAATGGATCTTCAAATGGAAAGCCAATGATTGGAC
TACCGCGAAGGGCTTGCCCGTCGCCAATCAAGAGCACTTTAAGAAGATTG
ATTCTCTTGTCGAATCTCTTGAAAATGAGCAGGTCCCTGTCCAGTTCTGG
CAGGTTCCGAGAGAATTTAACCAGGAGGCGGATAGGCTGGCAGCGTCTGC
TCTGGATGATGATTGAATGCAGAGACGCTACCGGAAGAAGAGGCAGCCCA
AGTCTCGCCAGGGCACGCCCGAGAGCCTCCACACGGAGGAAAAGCACAGT
GATTGTCGCAGCTCTCTGTCTAGTCGCGAAACAGATGGAACCTCCACTTC
ATCTCCCCCAAAGCCGGCACAGGCAGGCTCCGTCCCAAGCCGCCGATTTA
ACCTGGACGAGCTATACCCAAAACACTTCACTTTGAGCGACATCGAGGTT
CCAGCACACAACATGGTCTTTCTCGCTTGCCCAGGCTCGGAAAGAAAATG
CCCCCACTGCAAACGCCACACGCGTCACCTGGGCTGTATCGTGATTGCCA
TAGATGGAGCGTGCCGCAATAATGGCAGATACGGAGCCCGGGCGTCAACT
GGGGTCTACCACGGCCACGACCATCCCTTAAACGGAAGTGCCAGTCTTTC
CCCCAATCTCAAGCAAACAAGCCAGGTCGCCGAACTCGCGGCCTGCGAGA
GGGCTCTGCTTGGTGCGTACGTCATGCAAAAGTGCTGGGATGGATTATCC
GAAATGACAGGAGATGGAGAAGAAAGGCTTCACACCGTGGTGATCAAGTC
AGACTCGGAGTATGTGGTGCGCGGAATGACCGAATGGATCTTCAAATGGA
AAGCCAATGATTGGACTACCGCGAAGGGCTTGCCCGTCGCCAATCAAGAG
CACTTTAAGAAGATTGATTCTCTTGTCGAATCTCTTGAAAATGAGCAGGT
CCCTGTCCAGTTCTGGCAGGTTCCGAGAGAATTTAACCAGGAGGCGGATA
GGCTGGCAGCGTCTGCTCTGGATGATGATTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004523 | RNA-DNA hybrid ribonuclease activity |
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR012337 |
| DBxref | InterPro:IPR002156 |
| DBxref | InterPro:IPR036397 |
| DBxref | PFAM:PF00075 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:337816..338743 + |
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