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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:387988..389321+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001683-T1 ID=KJC3_001683-T1|Name=KJC3_001683-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1334bp|location=Sequence derived from alignment at ch2:387988..389321+ (Aspergillus niger KJC3)
CCTGGTGTGTCTATTTTGTTTTTACCAGCGTCAATGGGGCATTCCCGGGC
ATTGCTCCTCATTGAGGCAACTTGACACAAACACAGCCATCCACCATTAC
CGCAATACTTGCGGCTGTGCCCACCCCTATACACCTTGTTGGCGGGATTC
TCTTGATCCCTGTCGACCCCCGACGACATGCGGCCCCCAAAGAACCGGCT
TTCTATGCCCGACGCGGCAAACGAGGGGATTCACTACGCCAGTAGTGTTT
GACACTGGCTGACTGACGTCCACTAGGCAGCGACATGCTACTCCATGTAC
AACTGAATACTCGAAGTGGGATGAGTCGTACCAAGTGCCAACAGAACAAG
GCGTGTCATCTATAAACAACGAAAGATATATGAGTAACGTGTTGGAAGCT
CCAGAAACCTAGAAACAAGACAAGACAATCAATCAATCAATCACTCAACT
CACCAAACCTCAATTCCATCTTCACCACTCATCTCTACCCACATACCCAC
AAAACCACTCCCACATCAACACAATGGCCGCTCCCGCTTCCAAGACCATC
CACGACCTTAACGGCTCCTGGACCACCGTAAGACAACCCCAAACTCCCAC
ATCTATCACCCAACTCCAATATACTAACAAGACCCCCAGAACAACGACCT
CTCTGAGTCCTCCGCCGACATCCTCAAGGTTCAGGGTGTGAACTGGCTGA
CCCGCAAGGTGATCGCCATGGCGAACGTGACTCTGAACATCAGCCAGCGC
ACGGACGAGAACGGCAACATCCTGCTGGACATCGAGAACAAGCCCAGTGG
CGGCCTGCCGGCCACGCAGGAGAAGCGAGTCCTGAACTGGGAGCCCGTGG
AGCTCCACCACGGCCTCTTCGGCAACATCCGCGGTCGCTCCCGCCTCTGC
AAGCTCGCCGATCTCGACGACGATTACCTCCGCCAGGGATGGGAGGACGG
CACCGAGGAGGTCATGCACTTCAAGACCGAGCATCTCGAGTCCAAGGGCG
TTGTCACCCAGCAGGTCGCCGGCTTCATTGTTATCGGCGGTGTTCGCTAC
CACGCCAGGCGGGTCCTGGTCACTAAGGACGATGGCGAGAAGCTTGAGGC
TAAGCTTGTCTACGACTTCCAGGGTTAGAGATAGAATCTTCTTCGGTGTA
TATGTGTTGACGATTGTTTCATGGGGGTGGGGCTACATCAAGGGGCACAG
TAAACCTGCCTTCAGGCGATGTATATAGATCTTCTTGTTTGTTTTGACGA
TACCGTTGTTATTTGAATCTAGAAAGCAATTGTTGTATAAATGAGTTCCT
TGCTTGATTTACATAGGAATACATGTCTTTGCGT back to topCoding sequence (CDS) from alignment at ch2:387988..389321+ >KJC3_001683-T1 ID=KJC3_001683-T1|Name=KJC3_001683-T1|organism=Aspergillus niger KJC3|type=CDS|length=1086bp|location=Sequence derived from alignment at ch2:387988..389321+ (Aspergillus niger KJC3)
ATGGCCGCTCCCGCTTCCAAGACCATCCACGACCTTAACGGCTCCTGGAC
CACCAACAACGACCTCTCTGAGTCCTCCGCCGACATCCTCAAGGTTCAGG
GTGTGAACTGGCTGACCCGCAAGGTGATCGCCATGGCGAACGTGACTCTG
AACATCAGCCAGCGCACGGACGAGAACGGCAACATCCTGCTGGACATCGA
GAACAAGCCCAGTGGCGGCCTGCCGGCCACGCAGGAGAAGCGAGTCCTGA
ACTGGGAGCCCGTGGAGCTCCACCACGGCCTCTTCGGCAACATCCGCGGT
CGCTCCCGCCTCTGCAAGCTCGCCGATCTCGACGACGATTACCTCCGCCA
GGGATGGGAGGACGGCACCGAGGAGGTCATGCACTTCAAGACCGAGCATC
TCGAGTCCAAGGGCGTTGTCACCCAGCAGGTCGCCGGCTTCATTGTTATC
GGCGGTGTTCGCTACCACGCCAGGCGGGTCCTGGTCACTAAGGACGATGG
CGAGAAGCTTGAGGCTAAGCTTGTCTACGACTTCCAGGGTTAGATGGCCG
CTCCCGCTTCCAAGACCATCCACGACCTTAACGGCTCCTGGACCACCAAC
AACGACCTCTCTGAGTCCTCCGCCGACATCCTCAAGGTTCAGGGTGTGAA
CTGGCTGACCCGCAAGGTGATCGCCATGGCGAACGTGACTCTGAACATCA
GCCAGCGCACGGACGAGAACGGCAACATCCTGCTGGACATCGAGAACAAG
CCCAGTGGCGGCCTGCCGGCCACGCAGGAGAAGCGAGTCCTGAACTGGGA
GCCCGTGGAGCTCCACCACGGCCTCTTCGGCAACATCCGCGGTCGCTCCC
GCCTCTGCAAGCTCGCCGATCTCGACGACGATTACCTCCGCCAGGGATGG
GAGGACGGCACCGAGGAGGTCATGCACTTCAAGACCGAGCATCTCGAGTC
CAAGGGCGTTGTCACCCAGCAGGTCGCCGGCTTCATTGTTATCGGCGGTG
TTCGCTACCACGCCAGGCGGGTCCTGGTCACTAAGGACGATGGCGAGAAG
CTTGAGGCTAAGCTTGTCTACGACTTCCAGGGTTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001683-T1.utr5p1 | KJC3_001683-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001683-T1.utr3p1 | KJC3_001683-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_2.2 |
| Note | antiSMASH:Cluster_2.1 |
| DBxref | InterPro:IPR012674 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:387988..389321 + |
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