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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:431812..432949+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001692-T1 ID=KJC3_001692-T1|Name=KJC3_001692-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1138bp|location=Sequence derived from alignment at ch2:431812..432949+ (Aspergillus niger KJC3)
CATCCTCTTCCTCCCCTCTTCATCATCAGACCCCTGCATTAATTGTCATC
CGCCCAAGTTGATTCAATCTTCTGCCCACATCCATCATGGCCCCTCCCAC
CGCCACCGAAACAACCATCTTCTCTCCCGTTCCCGCCCAAACCCATTCCA
GCCAAGAAGCGGCTGCCGAAGCCGCCAAAGTGAAGAACACCCCCCAGAAA
TTCCCCCAGCCCCCAGTCTTCGAAGACAAGTACAAGGAACGCGAGTACCT
TAAGGGTCGACTAGCAGCGGCGTTTCGCATTTTCGGCAAGAATGGCTACG
ATGAAGGTGTGCCATCATCCCCCATCCGTACTACTTACTTTCCGATTGGC
ACATAATACTAACTTCTGTTGCAGGCGTGGCAGGACACATTACTCTCCGT
GACCCCGTCGACCCAACCACCTTCTGGGTGAACCCCTTTGGCGTAGCATT
CTCGCAGATTAAGTCATCCGACTTGATCCATGTGAGCCATGCCGGGGAAA
TCATTGGCGGCGGACCCGTCCGGCTGCTCAATGCTGCTGCCTTTATGATT
CACTCGGCCATTCATGCTGCTCGTCCGGACGTGCTCTGCGCTGCTCACAG
CCACAGTATTCACGGACGGGCTTTCTGTACCCTCGGACGGCCGCTGGATA
TCATCACGCAGGATGCGTGCGCATTCTACAATGTCAGTGCCTCCCTCCAG
CAATGGAACCCTCGACTAACTAGAGCAGGATATCGTCTTGTACAACCAGT
TCAACGGCATCGTGCTGGCCGAAGAAGAAGGGAAGAGCATTGCTCAAGCC
CTCGGCAACAAGAAAGCCGCACTGCTGCAGAACCACGGACTCCTAACCGT
AGGACAAACCATCGAGGAGACGGTGTTCTGGTTCGTCAGTCTGGAGAAAT
GCTGCTACGTGCAGCTGATGGCTGACGCCGCAGCCGCAGGCCGGGGCGGA
CAGACCGTCAAGGTAGACGAGGCAGATGCAGCATTCACATACAAGTCGGT
GGGCACACCCAGGGCAGGGTATTTCAGCGCGAAGCCAATGTTCGATTTGA
TCCACGAGGAGGCAGGGGGGAGCTATCTGAACTAGCAGCTACACCACTCA
TCATATACTATTCTATTCAATCCAAATCCATCCTCCCA back to topCoding sequence (CDS) from alignment at ch2:431812..432949+ >KJC3_001692-T1 ID=KJC3_001692-T1|Name=KJC3_001692-T1|organism=Aspergillus niger KJC3|type=CDS|length=2655bp|location=Sequence derived from alignment at ch2:431812..432949+ (Aspergillus niger KJC3)
ATGGCCCCTCCCACCGCCACCGAAACAACCATCTTCTCTCCCGTTCCCGC
CCAAACCCATTCCAGCCAAGAAGCGGCTGCCGAAGCCGCCAAAGTGAAGA
ACACCCCCCAGAAATTCCCCCAGCCCCCAGTCTTCGAAGACAAGTACAAG
GAACGCGAGTACCTTAAGGGTCGACTAGCAGCGGCGTTTCGCATTTTCGG
CAAGAATGGCTACGATGAAGGCGTGGCAGGACACATTACTCTCCGTGACC
CCGTCGACCCAACCACCTTCTGGGTGAACCCCTTTGGCGTAGCATTCTCG
CAGATTAAGTCATCCGACTTGATCCATGTGAGCCATGCCGGGGAAATCAT
TGGCGGCGGACCCGTCCGGCTGCTCAATGCTGCTGCCTTTATGATTCACT
CGGCCATTCATGCTGCTCGTCCGGACGTGCTCTGCGCTGCTCACAGCCAC
AGTATTCACGGACGGGCTTTCTGTACCCTCGGACGGCCGCTGGATATCAT
CACGCAGGATGCGTGCGCATTCTACAATGATATCGTCTTGTACAACCAGT
TCAACGGCATCGTGCTGGCCGAAGAAGAAGGGAAGAGCATTGCTCAAGCC
CTCGGCAACAAGAAAGCCGCACTGCTGCAGAACCACGGACTCCTAACCGT
AGGACAAACCATCGAGGAGACGGTGTTCTGGTTCGTCAGTCTGGAGAAAT
GCTGCTACGTGCAGCTGATGGCTGACGCCGCAGCCGCAGGCCGGGGCGGA
CAGACCGTCAAGGTAGACGAGGCAGATGCAGCATTCACATACAAGTCGGT
GGGCACACCCAGGGCAGGGTATTTCAGCGCGAAGCCAATGTTCGATTTGA
TCCACGAGGAGGCAGGGGGGAGCTATCTGAACTAGATGGCCCCTCCCACC
GCCACCGAAACAACCATCTTCTCTCCCGTTCCCGCCCAAACCCATTCCAG
CCAAGAAGCGGCTGCCGAAGCCGCCAAAGTGAAGAACACCCCCCAGAAAT
TCCCCCAGCCCCCAGTCTTCGAAGACAAGTACAAGGAACGCGAGTACCTT
AAGGGTCGACTAGCAGCGGCGTTTCGCATTTTCGGCAAGAATGGCTACGA
TGAAGGCGTGGCAGGACACATTACTCTCCGTGACCCCGTCGACCCAACCA
CCTTCTGGGTGAACCCCTTTGGCGTAGCATTCTCGCAGATTAAGTCATCC
GACTTGATCCATGTGAGCCATGCCGGGGAAATCATTGGCGGCGGACCCGT
CCGGCTGCTCAATGCTGCTGCCTTTATGATTCACTCGGCCATTCATGCTG
CTCGTCCGGACGTGCTCTGCGCTGCTCACAGCCACAGTATTCACGGACGG
GCTTTCTGTACCCTCGGACGGCCGCTGGATATCATCACGCAGGATGCGTG
CGCATTCTACAATGATATCGTCTTGTACAACCAGTTCAACGGCATCGTGC
TGGCCGAAGAAGAAGGGAAGAGCATTGCTCAAGCCCTCGGCAACAAGAAA
GCCGCACTGCTGCAGAACCACGGACTCCTAACCGTAGGACAAACCATCGA
GGAGACGGTGTTCTGGTTCGTCAGTCTGGAGAAATGCTGCTACGTGCAGC
TGATGGCTGACGCCGCAGCCGCAGGCCGGGGCGGACAGACCGTCAAGGTA
GACGAGGCAGATGCAGCATTCACATACAAGTCGGTGGGCACACCCAGGGC
AGGGTATTTCAGCGCGAAGCCAATGTTCGATTTGATCCACGAGGAGGCAG
GGGGGAGCTATCTGAACTAGATGGCCCCTCCCACCGCCACCGAAACAACC
ATCTTCTCTCCCGTTCCCGCCCAAACCCATTCCAGCCAAGAAGCGGCTGC
CGAAGCCGCCAAAGTGAAGAACACCCCCCAGAAATTCCCCCAGCCCCCAG
TCTTCGAAGACAAGTACAAGGAACGCGAGTACCTTAAGGGTCGACTAGCA
GCGGCGTTTCGCATTTTCGGCAAGAATGGCTACGATGAAGGCGTGGCAGG
ACACATTACTCTCCGTGACCCCGTCGACCCAACCACCTTCTGGGTGAACC
CCTTTGGCGTAGCATTCTCGCAGATTAAGTCATCCGACTTGATCCATGTG
AGCCATGCCGGGGAAATCATTGGCGGCGGACCCGTCCGGCTGCTCAATGC
TGCTGCCTTTATGATTCACTCGGCCATTCATGCTGCTCGTCCGGACGTGC
TCTGCGCTGCTCACAGCCACAGTATTCACGGACGGGCTTTCTGTACCCTC
GGACGGCCGCTGGATATCATCACGCAGGATGCGTGCGCATTCTACAATGA
TATCGTCTTGTACAACCAGTTCAACGGCATCGTGCTGGCCGAAGAAGAAG
GGAAGAGCATTGCTCAAGCCCTCGGCAACAAGAAAGCCGCACTGCTGCAG
AACCACGGACTCCTAACCGTAGGACAAACCATCGAGGAGACGGTGTTCTG
GTTCGTCAGTCTGGAGAAATGCTGCTACGTGCAGCTGATGGCTGACGCCG
CAGCCGCAGGCCGGGGCGGACAGACCGTCAAGGTAGACGAGGCAGATGCA
GCATTCACATACAAGTCGGTGGGCACACCCAGGGCAGGGTATTTCAGCGC
GAAGCCAATGTTCGATTTGATCCACGAGGAGGCAGGGGGGAGCTATCTGA
ACTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001692-T1.utr5p1 | KJC3_001692-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001692-T1.utr3p1 | KJC3_001692-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036409 |
| DBxref | InterPro:IPR001303 |
| DBxref | PFAM:PF00596 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:431812..432949 + |
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