You are here

Home

KJC3_001701-T1, KJC3_001701-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001701-T1
Unique NameKJC3_001701-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:447710..449674-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001701-T1 ID=KJC3_001701-T1|Name=KJC3_001701-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1965bp|location=Sequence derived from alignment at ch2:447710..449674- (Aspergillus niger KJC3)
GGGCGAGCCGCGCACGTGGGGCCGCCACAGACAGCCAGCCAGACTTCTTC
CCTTCTCTTCCTATCCATCAATAGCATCCTCTACCTACATACTCCCTTCT
CACAGATCCAACTACCGGCTTCATGCTTAGCCGACCCACAGAAGCCCAGC
AGGTACGTTCAAACCCTATTTTGCATCAGCCCTGCCCCTGAGCCACTCTA
CCACCCCCCACAAGCGCCGGGTCTGCCGATCCGTGCGGTTCTTGCATGTC
CAGCATAACCTGATCTATTGCTGACAGTCGACGTCTCAGATGCAGGCGAG
CCGAATTCGGTGACAACAGTGCATGACGAATGCTTGGTTCTTTCCACGCA
TCTCACCAGATGGATGGAGGTCATCATCGCTGGGTCACTGCCGACCCAGC
GCTTGGAGAGCGCCTTATAAAAGCCTCCCTTGCCCCAGCCAGGATCATTC
CTCATTCAGCTCAAATTCTCTTTCCTTTGATCTCAACTACCATTCCTTAA
GAAGCTGTGCTTCGTACCTTCATTTCGCCTTACTTTTTTTCTGCTTACTA
CTACAACTCCATCACTCTCTATTCTTTCAATATGAAGTTCACCGGAATCG
CTTTCGCCGGTCTTATCGGTTACGCTGCCGCCCTGCCGGCCATGGGCGCC
CAGCAAGACTCTGCTCCCAACGGTGTTCAGGCCACCGGAGCTCCCTCCTT
CCAGGGTGCTGCCCCCTCCGGCTCCCCTCTTCCCCTTCCCTCGGGTGCTC
CTCAGGGCCAGGGCTTCGGAGGCCAGGGCTTCGGCAACTCTAACGGTCAG
GGCCAGGCTCCCACCGTGAGCTTGGGCGATGCTCCTCAGCCTCCTCCCAC
TGGCTCCGCTGCCCCTGCTCCTTCTGGAGCTCCTCGTGGCCACAAGAGGC
GTCAGCTCGAGATCCCGGCTTCCGTCTCCAACGTCCCCGCCCCGACCGGC
TCCGCTGCTGCTGGAGGTGACTTCGGTGGTGCTCCTTCGGGTCCCGCTCC
CTCTGGTGCCGCTCCCTCTGGCGTCGCTGGTGGTGACGGCCCCTCTCCTT
CTGGTTCTTTCGGTGGCCAGGGCGGCCAGTCTGGCTCTTTCGGCGGCAAC
GGCGCCGCTCCCTCTGGCATTGCTGGCGGCAATGGCCCCTCTCCTTCCGG
CTCTTTCGGTGGTGCCGCTCCCTCCGGTGTTGCTGGTAGCAATGGCCCCT
CTCCCTCCGGCTCTTTTGGCGGCCAGCAGGGTCAGCAGGGCCAGAGCGGC
TTCGGCGGCCAGGACTCCCAGTCCCAGGGCCAGTCCCAGGACTCCAAGTC
TCAGAGCTCTAAGTCCCAGAACTCCAGGTCTGAGGGCTCTCAGTCTCAGG
ACTCCCAGTCCCAGGGATCTGACTCTGAGGGATCTCAGGGCTCTTTCGAG
CAGGGCTCCTCCTCTGAGCAGGGCTCTGGCTCTAGCTCTTTCGGTGGTAA
CGGTGCTGCTCCCTCCGGTGTTGCTGGTGGCAACGGCCCCTCTCCTTCCG
GCTCTTTCGGCGGTGCTGCTCCCTCCGGTGTTGCTGGCGGCAACGGTCCC
TCTCCCTCTGGCTCCTTCGGCGGTAACGGCGCTGCTCCCTCTGGCGTCGC
TGGTGGAAACGGCCCCTCTCCTTCCGGCTCCTTCGGTGGTAACGGTGCTG
CTCCTTCTGGTGCTGCCGGTGGTGCTCCCGCTGCCTCGGGCGCCCCCGCC
GCCGCTCCCTCGGGTGCTTCTTACTAAGTCCATGCGAAAGTCTTGGACTT
CGATCGACAATAAACACCTTCCATATCATCTGACGCTGATGCAATAGTTC
CACCGAGGACATCGACAATGCCATTGTGTCGGCGTGGACCAGAACAACAA
CAACTGGATGAAGGTGTGATGGATTGGACGCTTGTGTACATTAATCACTC
AATAACCAGTCATTCCTTTGACCAGATCTGGTAGAAAGACAGAATTCGGC
TGAAACCTTCTCTGA
back to top

Coding sequence (CDS) from alignment at ch2:447710..449674-

>KJC3_001701-T1 ID=KJC3_001701-T1|Name=KJC3_001701-T1|organism=Aspergillus niger KJC3|type=CDS|length=1146bp|location=Sequence derived from alignment at ch2:447710..449674- (Aspergillus niger KJC3)
ATGAAGTTCACCGGAATCGCTTTCGCCGGTCTTATCGGTTACGCTGCCGC
CCTGCCGGCCATGGGCGCCCAGCAAGACTCTGCTCCCAACGGTGTTCAGG
CCACCGGAGCTCCCTCCTTCCAGGGTGCTGCCCCCTCCGGCTCCCCTCTT
CCCCTTCCCTCGGGTGCTCCTCAGGGCCAGGGCTTCGGAGGCCAGGGCTT
CGGCAACTCTAACGGTCAGGGCCAGGCTCCCACCGTGAGCTTGGGCGATG
CTCCTCAGCCTCCTCCCACTGGCTCCGCTGCCCCTGCTCCTTCTGGAGCT
CCTCGTGGCCACAAGAGGCGTCAGCTCGAGATCCCGGCTTCCGTCTCCAA
CGTCCCCGCCCCGACCGGCTCCGCTGCTGCTGGAGGTGACTTCGGTGGTG
CTCCTTCGGGTCCCGCTCCCTCTGGTGCCGCTCCCTCTGGCGTCGCTGGT
GGTGACGGCCCCTCTCCTTCTGGTTCTTTCGGTGGCCAGGGCGGCCAGTC
TGGCTCTTTCGGCGGCAACGGCGCCGCTCCCTCTGGCATTGCTGGCGGCA
ATGGCCCCTCTCCTTCCGGCTCTTTCGGTGGTGCCGCTCCCTCCGGTGTT
GCTGGTAGCAATGGCCCCTCTCCCTCCGGCTCTTTTGGCGGCCAGCAGGG
TCAGCAGGGCCAGAGCGGCTTCGGCGGCCAGGACTCCCAGTCCCAGGGCC
AGTCCCAGGACTCCAAGTCTCAGAGCTCTAAGTCCCAGAACTCCAGGTCT
GAGGGCTCTCAGTCTCAGGACTCCCAGTCCCAGGGATCTGACTCTGAGGG
ATCTCAGGGCTCTTTCGAGCAGGGCTCCTCCTCTGAGCAGGGCTCTGGCT
CTAGCTCTTTCGGTGGTAACGGTGCTGCTCCCTCCGGTGTTGCTGGTGGC
AACGGCCCCTCTCCTTCCGGCTCTTTCGGCGGTGCTGCTCCCTCCGGTGT
TGCTGGCGGCAACGGTCCCTCTCCCTCTGGCTCCTTCGGCGGTAACGGCG
CTGCTCCCTCTGGCGTCGCTGGTGGAAACGGCCCCTCTCCTTCCGGCTCC
TTCGGTGGTAACGGTGCTGCTCCTTCTGGTGCTGCCGGTGGTGCTCCCGC
TGCCTCGGGCGCCCCCGCCGCCGCTCCCTCGGGTGCTTCTTACTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001701KJC3_001701Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001701-T1KJC3_001701-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001701-T1.cdsKJC3_001701-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001701-T1.utr3p1KJC3_001701-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001701-T1.exon2KJC3_001701-T1.exon2Aspergillus niger KJC3exon
KJC3_001701-T1.exon1KJC3_001701-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001701-T1.utr5p2KJC3_001701-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_001701-T1.utr5p1KJC3_001701-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteSECRETED:SignalP(1-17)
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:447710..449674 -
Powered by Drupal