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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:511640..513936- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001723-T1 ID=KJC3_001723-T1|Name=KJC3_001723-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2297bp|location=Sequence derived from alignment at ch2:511640..513936- (Aspergillus niger KJC3)
TGAGACTTACACACCACAAACCCATACCAACTACTCACCTCAAAACAAAG
ACAAACAACCTCCGGAGCAAACCACCCCATCAGTAAGCCGTCAAACCCAA
TCTCCCTTCCCGCTCTACCCGTTCCTTTATCTACATCATCCAAGCAACCC
AGCTACCCCGTTAACCTCACATCCGCCGACCACCGAACCCCTACCCTCCC
AACCATGGATCGCCCTCCCCATGACACCATCACTCTTCTAACCACCACCA
ACAACAATAAATACACCCCATCTACCACTCCAACAATGCCATCTCTACAC
AAAAGCCCCCTTCTGTATCATCCATCTCCACCAAAATGCCCTCTCCATCC
CCCTCCAGCACCTCCTCCCTATCCAACATCCCAACCGCCCACGCGAGCTT
CGAGCCCGTCCGCACCTCCGAAACCCGAACCCTAAGCCGGCCGCAAACCA
ACATCGAGGTCTCGCGCATCGAGACCCTCCGTCTAACGCACGAATCCACC
GTCGGGTCCAAGGCGCCTCAGACTCCCCGGGATGAATGGCTACCTATGGG
TGGGGGGAAAGAGTTTCCCCCGTCACTACCGGATCCGGATCGCTATGTAG
TCGAGTTTACGGGTGAGGGGGATCCGATGCATCCGCATAATTGGCCGATT
GGGACGAAGTGTGTATTTTGCTATCTATGTATATATAGAGGGATTTGGTG
AATATACGCTGACATGGGAATGGAATAATATAGGATCCTCCTATCAGGCA
TCCTAGCTTACGTGACGTTTACTGCGTCGTTCGCTAGCGCGATATTCTCT
TCAACGGTTGGGGCAATCAGTCTTCACTATGGAATCAGCACCGAGGTCGC
GACGCTCGGTGTGACGTTGTATGTACTTGGGTTCGCGGCGGGGCCGACGT
TCTGGGCGCCTGCGTCGGAGCTGTCTGGGCGGCGGTGGCCCATCACGGCT
GGGGTATTTGGGTATAGTATCTTTACTGTGGCGACGGCGACAGCCAAGGA
TGTGCAGACCATCATGCTGACGCGGTTCTTTGCTGGGTTGTTCGCGGCGA
GTCCGTTGTCGATTGTGCCGGCGGCGTTTTCGGATATCTACAATAACCGG
ACGCGGGGGATTGCGATCGCGATGTTTGCCATGGCGGTGTTTGTGGGGCC
ATTTGCGTCGCCGTTTACGGGGGGTTTCATCGTGATGAGTTATCTGGGGT
GGAGGTGGACGATGTATATTGCGGCGATCATGGGGTTTTTGGGGTCGGCG
CTGTTGTTGTTGTTTTACAAGGAGACGTATGCGCCGGCGCTGTTGATGGC
TAAGGCGGCGACGGTGAGGAGACAGACACGAAATTGGGGGATTCATGCTA
AGCAGGATGAGGTGGAGGTTGATTTTCGGGAGCTGATTACGGTGAATTTT
AGTCGGCCGTTTCGGATGTTGCTTACGGAGCCGATTGTGTTCCTGGTCAC
GCTGTACATGTCGTTCATATATGGGCTCATGTATGCTTTGCTGGCGGCGT
ATCCGGTGGTGTTTCAGGATATTCATGGGATGAATCTTGGGGTGGGCAGT
CTACCGTTTATTGGGCTGATCATTGGGGAGATTCTGGGAGGGGTGTTTGT
CTTGTCGAGTCAGGGCTCGTATACCAAGAAGTTGAGGGCGAATAACGACA
TTCCCATCCCTGAGTGGCGGTTACCCCCGGCCATTGTGGGGGGCATCTCT
TTCACCATTGGACTCTTCTGGTAAGGTGCCTTTCTGCTGGGTGAGTATCT
GGCTGATCTGAATAGGTATGGCTGGACCGGATGGACGCGGTCGATCCATT
GGATGGCCCCGACAGCGTCCGGGCTGTTCACGGGGTTCGGCATCTACTGC
ATCTTTCTGCAGTGTTTCAACTACCTGATCGATTCGTATCTGCAGTTGTA
AGCTCCTTCTCATGACGCAAATCATTGAAAGCTTCTGACCGAACAGCGCC
GCCTCGGTCTTTGCCGCCAACACCATCCTGCGGTCTGCAGTCGGGGCATG
CTTCCCTCTCTTTGCGCGACAGATGTTTGTCAATCTGGGGGTGCAGTGGG
CGGGCACATTGCTGGGGTGTCTGGCGGCGATTATGATCCCGATTCCCGTG
GGGTTCATCATGTTTGGACCCGCCTTACGGCGGAGGAGCAAGTTTGCCCC
GGCGGCGGCGGTGTTCCAGGAAAAGTCAGCCTAGTCAGGGTCTCAACACA
GCCCGTAAGGTAAGTAGATAGATAGATACCATATACATCTTATCTTAGAT
AGCCGTACATCTGTTGAAGGAAGACGACAAATGAAGCCAAGAGTGCC back to topCoding sequence (CDS) from alignment at ch2:511640..513936- >KJC3_001723-T1 ID=KJC3_001723-T1|Name=KJC3_001723-T1|organism=Aspergillus niger KJC3|type=CDS|length=6720bp|location=Sequence derived from alignment at ch2:511640..513936- (Aspergillus niger KJC3)
CGCCGCCTCGGTCTTTGCCGCCAACACCATCCTGCGGTCTGCAGTCGGGG
CATGCTTCCCTCTCTTTGCGCGACAGATGTTTGTCAATCTGGGGGTGCAG
TGGGCGGGCACATTGCTGGGGTGTCTGGCGGCGATTATGATCCCGATTCC
CGTGGGGTTCATCATGTTTGGACCCGCCTTACGGCGGAGGAGCAAGTTTG
CCCCGGCGGCGGCGGTGTTCCAGGAAAAGTCAGCCTAGGTATGGCTGGAC
CGGATGGACGCGGTCGATCCATTGGATGGCCCCGACAGCGTCCGGGCTGT
TCACGGGGTTCGGCATCTACTGCATCTTTCTGCAGTGTTTCAACTACCTG
ATCGATTCGTATCTGCAGTTGATCCTCCTATCAGGCATCCTAGCTTACGT
GACGTTTACTGCGTCGTTCGCTAGCGCGATATTCTCTTCAACGGTTGGGG
CAATCAGTCTTCACTATGGAATCAGCACCGAGGTCGCGACGCTCGGTGTG
ACGTTGTATGTACTTGGGTTCGCGGCGGGGCCGACGTTCTGGGCGCCTGC
GTCGGAGCTGTCTGGGCGGCGGTGGCCCATCACGGCTGGGGTATTTGGGT
ATAGTATCTTTACTGTGGCGACGGCGACAGCCAAGGATGTGCAGACCATC
ATGCTGACGCGGTTCTTTGCTGGGTTGTTCGCGGCGAGTCCGTTGTCGAT
TGTGCCGGCGGCGTTTTCGGATATCTACAATAACCGGACGCGGGGGATTG
CGATCGCGATGTTTGCCATGGCGGTGTTTGTGGGGCCATTTGCGTCGCCG
TTTACGGGGGGTTTCATCGTGATGAGTTATCTGGGGTGGAGGTGGACGAT
GTATATTGCGGCGATCATGGGGTTTTTGGGGTCGGCGCTGTTGTTGTTGT
TTTACAAGGAGACGTATGCGCCGGCGCTGTTGATGGCTAAGGCGGCGACG
GTGAGGAGACAGACACGAAATTGGGGGATTCATGCTAAGCAGGATGAGGT
GGAGGTTGATTTTCGGGAGCTGATTACGGTGAATTTTAGTCGGCCGTTTC
GGATGTTGCTTACGGAGCCGATTGTGTTCCTGGTCACGCTGTACATGTCG
TTCATATATGGGCTCATGTATGCTTTGCTGGCGGCGTATCCGGTGGTGTT
TCAGGATATTCATGGGATGAATCTTGGGGTGGGCAGTCTACCGTTTATTG
GGCTGATCATTGGGGAGATTCTGGGAGGGGTGTTTGTCTTGTCGAGTCAG
GGCTCGTATACCAAGAAGTTGAGGGCGAATAACGACATTCCCATCCCTGA
GTGGCGGTTACCCCCGGCCATTGTGGGGGGCATCTCTTTCACCATTGGAC
TCTTCTGATGCCCTCTCCATCCCCCTCCAGCACCTCCTCCCTATCCAACA
TCCCAACCGCCCACGCGAGCTTCGAGCCCGTCCGCACCTCCGAAACCCGA
ACCCTAAGCCGGCCGCAAACCAACATCGAGGTCTCGCGCATCGAGACCCT
CCGTCTAACGCACGAATCCACCGTCGGGTCCAAGGCGCCTCAGACTCCCC
GGGATGAATGGCTACCTATGGGTGGGGGGAAAGAGTTTCCCCCGTCACTA
CCGGATCCGGATCGCTATGTAGTCGAGTTTACGGGTGAGGGGGATCCGAT
GCATCCGCATAATTGGCCGATTGGGACGAACGCCGCCTCGGTCTTTGCCG
CCAACACCATCCTGCGGTCTGCAGTCGGGGCATGCTTCCCTCTCTTTGCG
CGACAGATGTTTGTCAATCTGGGGGTGCAGTGGGCGGGCACATTGCTGGG
GTGTCTGGCGGCGATTATGATCCCGATTCCCGTGGGGTTCATCATGTTTG
GACCCGCCTTACGGCGGAGGAGCAAGTTTGCCCCGGCGGCGGCGGTGTTC
CAGGAAAAGTCAGCCTAGGTATGGCTGGACCGGATGGACGCGGTCGATCC
ATTGGATGGCCCCGACAGCGTCCGGGCTGTTCACGGGGTTCGGCATCTAC
TGCATCTTTCTGCAGTGTTTCAACTACCTGATCGATTCGTATCTGCAGTT
GATCCTCCTATCAGGCATCCTAGCTTACGTGACGTTTACTGCGTCGTTCG
CTAGCGCGATATTCTCTTCAACGGTTGGGGCAATCAGTCTTCACTATGGA
ATCAGCACCGAGGTCGCGACGCTCGGTGTGACGTTGTATGTACTTGGGTT
CGCGGCGGGGCCGACGTTCTGGGCGCCTGCGTCGGAGCTGTCTGGGCGGC
GGTGGCCCATCACGGCTGGGGTATTTGGGTATAGTATCTTTACTGTGGCG
ACGGCGACAGCCAAGGATGTGCAGACCATCATGCTGACGCGGTTCTTTGC
TGGGTTGTTCGCGGCGAGTCCGTTGTCGATTGTGCCGGCGGCGTTTTCGG
ATATCTACAATAACCGGACGCGGGGGATTGCGATCGCGATGTTTGCCATG
GCGGTGTTTGTGGGGCCATTTGCGTCGCCGTTTACGGGGGGTTTCATCGT
GATGAGTTATCTGGGGTGGAGGTGGACGATGTATATTGCGGCGATCATGG
GGTTTTTGGGGTCGGCGCTGTTGTTGTTGTTTTACAAGGAGACGTATGCG
CCGGCGCTGTTGATGGCTAAGGCGGCGACGGTGAGGAGACAGACACGAAA
TTGGGGGATTCATGCTAAGCAGGATGAGGTGGAGGTTGATTTTCGGGAGC
TGATTACGGTGAATTTTAGTCGGCCGTTTCGGATGTTGCTTACGGAGCCG
ATTGTGTTCCTGGTCACGCTGTACATGTCGTTCATATATGGGCTCATGTA
TGCTTTGCTGGCGGCGTATCCGGTGGTGTTTCAGGATATTCATGGGATGA
ATCTTGGGGTGGGCAGTCTACCGTTTATTGGGCTGATCATTGGGGAGATT
CTGGGAGGGGTGTTTGTCTTGTCGAGTCAGGGCTCGTATACCAAGAAGTT
GAGGGCGAATAACGACATTCCCATCCCTGAGTGGCGGTTACCCCCGGCCA
TTGTGGGGGGCATCTCTTTCACCATTGGACTCTTCTGATGCCCTCTCCAT
CCCCCTCCAGCACCTCCTCCCTATCCAACATCCCAACCGCCCACGCGAGC
TTCGAGCCCGTCCGCACCTCCGAAACCCGAACCCTAAGCCGGCCGCAAAC
CAACATCGAGGTCTCGCGCATCGAGACCCTCCGTCTAACGCACGAATCCA
CCGTCGGGTCCAAGGCGCCTCAGACTCCCCGGGATGAATGGCTACCTATG
GGTGGGGGGAAAGAGTTTCCCCCGTCACTACCGGATCCGGATCGCTATGT
AGTCGAGTTTACGGGTGAGGGGGATCCGATGCATCCGCATAATTGGCCGA
TTGGGACGAACGCCGCCTCGGTCTTTGCCGCCAACACCATCCTGCGGTCT
GCAGTCGGGGCATGCTTCCCTCTCTTTGCGCGACAGATGTTTGTCAATCT
GGGGGTGCAGTGGGCGGGCACATTGCTGGGGTGTCTGGCGGCGATTATGA
TCCCGATTCCCGTGGGGTTCATCATGTTTGGACCCGCCTTACGGCGGAGG
AGCAAGTTTGCCCCGGCGGCGGCGGTGTTCCAGGAAAAGTCAGCCTAGGT
ATGGCTGGACCGGATGGACGCGGTCGATCCATTGGATGGCCCCGACAGCG
TCCGGGCTGTTCACGGGGTTCGGCATCTACTGCATCTTTCTGCAGTGTTT
CAACTACCTGATCGATTCGTATCTGCAGTTGATCCTCCTATCAGGCATCC
TAGCTTACGTGACGTTTACTGCGTCGTTCGCTAGCGCGATATTCTCTTCA
ACGGTTGGGGCAATCAGTCTTCACTATGGAATCAGCACCGAGGTCGCGAC
GCTCGGTGTGACGTTGTATGTACTTGGGTTCGCGGCGGGGCCGACGTTCT
GGGCGCCTGCGTCGGAGCTGTCTGGGCGGCGGTGGCCCATCACGGCTGGG
GTATTTGGGTATAGTATCTTTACTGTGGCGACGGCGACAGCCAAGGATGT
GCAGACCATCATGCTGACGCGGTTCTTTGCTGGGTTGTTCGCGGCGAGTC
CGTTGTCGATTGTGCCGGCGGCGTTTTCGGATATCTACAATAACCGGACG
CGGGGGATTGCGATCGCGATGTTTGCCATGGCGGTGTTTGTGGGGCCATT
TGCGTCGCCGTTTACGGGGGGTTTCATCGTGATGAGTTATCTGGGGTGGA
GGTGGACGATGTATATTGCGGCGATCATGGGGTTTTTGGGGTCGGCGCTG
TTGTTGTTGTTTTACAAGGAGACGTATGCGCCGGCGCTGTTGATGGCTAA
GGCGGCGACGGTGAGGAGACAGACACGAAATTGGGGGATTCATGCTAAGC
AGGATGAGGTGGAGGTTGATTTTCGGGAGCTGATTACGGTGAATTTTAGT
CGGCCGTTTCGGATGTTGCTTACGGAGCCGATTGTGTTCCTGGTCACGCT
GTACATGTCGTTCATATATGGGCTCATGTATGCTTTGCTGGCGGCGTATC
CGGTGGTGTTTCAGGATATTCATGGGATGAATCTTGGGGTGGGCAGTCTA
CCGTTTATTGGGCTGATCATTGGGGAGATTCTGGGAGGGGTGTTTGTCTT
GTCGAGTCAGGGCTCGTATACCAAGAAGTTGAGGGCGAATAACGACATTC
CCATCCCTGAGTGGCGGTTACCCCCGGCCATTGTGGGGGGCATCTCTTTC
ACCATTGGACTCTTCTGATGCCCTCTCCATCCCCCTCCAGCACCTCCTCC
CTATCCAACATCCCAACCGCCCACGCGAGCTTCGAGCCCGTCCGCACCTC
CGAAACCCGAACCCTAAGCCGGCCGCAAACCAACATCGAGGTCTCGCGCA
TCGAGACCCTCCGTCTAACGCACGAATCCACCGTCGGGTCCAAGGCGCCT
CAGACTCCCCGGGATGAATGGCTACCTATGGGTGGGGGGAAAGAGTTTCC
CCCGTCACTACCGGATCCGGATCGCTATGTAGTCGAGTTTACGGGTGAGG
GGGATCCGATGCATCCGCATAATTGGCCGATTGGGACGAACGCCGCCTCG
GTCTTTGCCGCCAACACCATCCTGCGGTCTGCAGTCGGGGCATGCTTCCC
TCTCTTTGCGCGACAGATGTTTGTCAATCTGGGGGTGCAGTGGGCGGGCA
CATTGCTGGGGTGTCTGGCGGCGATTATGATCCCGATTCCCGTGGGGTTC
ATCATGTTTGGACCCGCCTTACGGCGGAGGAGCAAGTTTGCCCCGGCGGC
GGCGGTGTTCCAGGAAAAGTCAGCCTAGGTATGGCTGGACCGGATGGACG
CGGTCGATCCATTGGATGGCCCCGACAGCGTCCGGGCTGTTCACGGGGTT
CGGCATCTACTGCATCTTTCTGCAGTGTTTCAACTACCTGATCGATTCGT
ATCTGCAGTTGATCCTCCTATCAGGCATCCTAGCTTACGTGACGTTTACT
GCGTCGTTCGCTAGCGCGATATTCTCTTCAACGGTTGGGGCAATCAGTCT
TCACTATGGAATCAGCACCGAGGTCGCGACGCTCGGTGTGACGTTGTATG
TACTTGGGTTCGCGGCGGGGCCGACGTTCTGGGCGCCTGCGTCGGAGCTG
TCTGGGCGGCGGTGGCCCATCACGGCTGGGGTATTTGGGTATAGTATCTT
TACTGTGGCGACGGCGACAGCCAAGGATGTGCAGACCATCATGCTGACGC
GGTTCTTTGCTGGGTTGTTCGCGGCGAGTCCGTTGTCGATTGTGCCGGCG
GCGTTTTCGGATATCTACAATAACCGGACGCGGGGGATTGCGATCGCGAT
GTTTGCCATGGCGGTGTTTGTGGGGCCATTTGCGTCGCCGTTTACGGGGG
GTTTCATCGTGATGAGTTATCTGGGGTGGAGGTGGACGATGTATATTGCG
GCGATCATGGGGTTTTTGGGGTCGGCGCTGTTGTTGTTGTTTTACAAGGA
GACGTATGCGCCGGCGCTGTTGATGGCTAAGGCGGCGACGGTGAGGAGAC
AGACACGAAATTGGGGGATTCATGCTAAGCAGGATGAGGTGGAGGTTGAT
TTTCGGGAGCTGATTACGGTGAATTTTAGTCGGCCGTTTCGGATGTTGCT
TACGGAGCCGATTGTGTTCCTGGTCACGCTGTACATGTCGTTCATATATG
GGCTCATGTATGCTTTGCTGGCGGCGTATCCGGTGGTGTTTCAGGATATT
CATGGGATGAATCTTGGGGTGGGCAGTCTACCGTTTATTGGGCTGATCAT
TGGGGAGATTCTGGGAGGGGTGTTTGTCTTGTCGAGTCAGGGCTCGTATA
CCAAGAAGTTGAGGGCGAATAACGACATTCCCATCCCTGAGTGGCGGTTA
CCCCCGGCCATTGTGGGGGGCATCTCTTTCACCATTGGACTCTTCTGATG
CCCTCTCCATCCCCCTCCAGCACCTCCTCCCTATCCAACATCCCAACCGC
CCACGCGAGCTTCGAGCCCGTCCGCACCTCCGAAACCCGAACCCTAAGCC
GGCCGCAAACCAACATCGAGGTCTCGCGCATCGAGACCCTCCGTCTAACG
CACGAATCCACCGTCGGGTCCAAGGCGCCTCAGACTCCCCGGGATGAATG
GCTACCTATGGGTGGGGGGAAAGAGTTTCCCCCGTCACTACCGGATCCGG
ATCGCTATGTAGTCGAGTTTACGGGTGAGGGGGATCCGATGCATCCGCAT
AATTGGCCGATTGGGACGAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001723-T1.utr3p1 | KJC3_001723-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001723-T1.utr5p1 | KJC3_001723-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_2.4 |
| Note | SMCOG1106:major facilitator transporter |
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:511640..513936 - |
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