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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:545227..548118- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001738-T1 ID=KJC3_001738-T1|Name=KJC3_001738-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2892bp|location=Sequence derived from alignment at ch2:545227..548118- (Aspergillus niger KJC3)
ATTCCATCCATTCCATCGGCCCGAGCAGGGGCGTGTCCCATTGAAAAATT
CTGCCTCGTGTTCCTGGATTCGCTCGATCAGGTCATCCCGTGGTTGACAA
TGCCCTTGTTGGCTTTCCTGCCACTTCAGCAGCAGTAGCAAGAGCAGCAG
CAGCAGCAGCAGCAGTCATGCCACACTTTGCGTTGGCCACCCAGGGCAAG
GGATAGCTACAGTAACCCCAATTCCGGAGATCGGCGCTTGGCTTTCCAGC
TCGATTCAAATGGAGGGAAGAACACCGCCTTTTCGAGTTGGCGACAGCCT
CAGGCTAGTAATTAAGGTTAACTTTTTCCAGTAAAGTCTGTCGTACTCCG
TACATCTTCTGGGGGGGAGAAGCGTGGCTTGCTATCATTCATGGAGCCAG
CTGGGATTACTGTATCTACCCCCGGTCTCTCTACCCTCCCCAAGGCTTAA
AGGGTAGTACCAAGACTGCTCTATCATCCGTAACAAAAAGACCTCAGGAG
ATCTTCCCTGCCAACTCAGCGAGGCCATGACATGGCGTCTATCAAGCCGG
TCGCTGGGAAAATGTCGGTGTCATATTTTTAGGTCGCCTGATCGTCACGA
AGAGTTTTCCCCAATCCTTAGTGTGCGGGCGAAGAGTTGATGCTCGCCCC
TGAATGGATTGCTTCCGGCGTTCCACTCCATCCATCGCGGTGGGCCCTCC
CACACCCCCTTCGCTTTCGGTATTTATTCTGGCACGCCTTGGGGGGGCGA
TCCTTTTTTTAATCCCCATCAGCTCTCCAGATCAGCCACACTTCCACTCT
TTCTTCCTCAGTTCCAATTCCAGGTACTGATTTCCTTCACCACCATGGCT
TTCGATTGCTACTGCGCAATCTGCGGTGTTGGTTTCTGTGGCATGCACAT
CGAGGCGCCGTCGGAGACGGCCCTCGAGCGCCGCAGGCGGTGGATCGAAA
AGCGATGCCGGGCGCTGCAAGCCGGCGAAGACTTCAGGCAGGTGTCGCAC
GAGGGAGAGGAAAATGAGGAGCCCGTCCGCAGCTACGACCCTCGCATCGT
GGGCTGGGACAATATTTCCTGGTTGTATAAGGCACACTGCCTGGGTGTGG
ATGAAAATGCCAAATCGGGTGCGCCAAAGTAGGTGCTGCTGCTGTTCGCG
CGGTCGGAGAGACCCGTTTAACAATCTTTTAGAGCGTTTCTCTCGGATGA
AGGATATTATGCCGATATTGTAGGCGCTCTCACTGAGTGCGACGTTTTCG
ATCGAAGCTAATTACGTATCAGGGCGAGTTTGTCGTCAAGGCCAAATCTG
GTATGCTGATGAGCCGATGTGCTTCAACTCATGGTTTTTCATGGTTATTG
ACCTTATTTAGATGGTTCCCGGTCGCGCTCTCAGCGCGTTTATTCATGGT
GTGACATACCCACTTCGTAGACTCGTCTTGTTGACCCATTCTGACCGTTC
AAAGCTATGGCCATGGCTCGGAGGAAGCGCCCGGTCCTGTCTTACCGTTC
CACTGGGGCTGTTTTGAAATCTTGACTCGCGCACTGACGGGGACGACTGA
CACTAAAAACGTCAACCTGGACGTGTTGTACAATATCATGACGCCGTTGT
GCAACATGTCCGGGTCTGCCCTGCAATTGAACTACGGAGACGACATCCAG
CGCTCGCAAGGCCGCTACTGGGAATGTATCCCGGGCGCAGAGGCAAGCAT
ATCTTCGCCGAGCTCTGTCTAAACTATGTTAACGATCGGAGCAGTACTGT
GCCGCCCACCCGGTAGAAACACCCGGACTCGACGAATACCTTCAAAGCAA
TATGGAGACAAATAGCGGCTTGAAGACTCCGTTCGCGAAGCTGGATCTCC
GCGACCGGAAGCCTATCAGCCCATTCGGCAAACTGCCCCTTGAAATCGTT
TATCAGATCTGCAAATTCTTGCCTAGCGATTCGCTGAAAGCACTGGCCGA
AGCCTCGTTGTACATCCACCTCGTCACCCAGGACAACCTATTCTGGAAAC
AGTTTATGCAGAGCAACATGCCCTGGTTCTGGGAGCTTCAGGCAGCAAAG
AACCAGAAGATCCCCGCGGATCTCAATTATAAGAGGATGTACATGTGGCT
CGATAAGATGACTGCTCCGCGGTACGGCATGGACGATGTGAAACTGATTG
GTGTCGCCAACCGGAGACGCATCTGGGGTGTATGCGAGGATCTTGCGGAT
CGGTACTCCAAGAGCCTGAATCAGCCCACAGTTAGTGCGATGCAGTGGGG
AAGTGGCTGAGGGAGTGTACTCTATGCTGTGATAAGATGGAGAAATAGTC
CCGCCTGACAGGCTTGCGAGATGCCCGACCGATGGCTCCCCACGACGCGC
TTCAACCTGAGCGTACGACACGTCGTTACAGATTCGACCATTTATGGGGA
TCTCGTAACGCGTGTGACCTGGCGATATGGGATCAATCACAAGTAGCTTG
CTACATGAGCAAGGTGAAAGTGACAGGGAGACTGGAAACAGTTCATCCCC
TCGTTCAGGTTCGCCAGGATGTGGAGAACCAGGTTGGGCACGAGACTTGG
GCGATCAAATCATGTGCTGCGGAGTACTTCACTCGATACCTTAGCACTAA
TACTTACCCTTTATTACCAAGAGCTGTAGAGTTGTGTCTCATAAAGCCAA
CAGATTTTTAATCGTTCATTGCTGGAGGGAGTCCTGTTTTGGGAAGTCTA
CAGTCAGCTGCATATCAATGGTACAGCGCAAAACTCCATGCATTGCCATC
AAGTCCATACATCAAATTGTACTTCCTCTCATTAGAAGAAAAGAACATAC
AAACACATGCCAACAAAACCCACATATGTTGAATTGAAAGCACACAAAAA
CACAATATACCCTTCATCGTAACCACTCCTCCAATCAATCCG back to topCoding sequence (CDS) from alignment at ch2:545227..548118- >KJC3_001738-T1 ID=KJC3_001738-T1|Name=KJC3_001738-T1|organism=Aspergillus niger KJC3|type=CDS|length=6840bp|location=Sequence derived from alignment at ch2:545227..548118- (Aspergillus niger KJC3)
TACTGTGCCGCCCACCCGGTAGAAACACCCGGACTCGACGAATACCTTCA
AAGCAATATGGAGACAAATAGCGGCTTGAAGACTCCGTTCGCGAAGCTGG
ATCTCCGCGACCGGAAGCCTATCAGCCCATTCGGCAAACTGCCCCTTGAA
ATCGTTTATCAGATCTGCAAATTCTTGCCTAGCGATTCGCTGAAAGCACT
GGCCGAAGCCTCGTTGTACATCCACCTCGTCACCCAGGACAACCTATTCT
GGAAACAGTTTATGCAGAGCAACATGCCCTGGTTCTGGGAGCTTCAGGCA
GCAAAGAACCAGAAGATCCCCGCGGATCTCAATTATAAGAGGATGTACAT
GTGGCTCGATAAGATGACTGCTCCGCGGTACGGCATGGACGATGTGAAAC
TGATTGGTGTCGCCAACCGGAGACGCATCTGGGGTGTATGCGAGGATCTT
GCGGATCGGTACTCCAAGAGCCTGAATCAGCCCACAGTTAGTGCGATGCA
GTGGGGAAGTGGCTGACTATGGCCATGGCTCGGAGGAAGCGCCCGGTCCT
GTCTTACCGTTCCACTGGGGCTGTTTTGAAATCTTGACTCGCGCACTGAC
GGGGACGACTGACACTAAAAACGTCAACCTGGACGTGTTGTACAATATCA
TGACGCCGTTGTGCAACATGTCCGGGTCTGCCCTGCAATTGAACTACGGA
GACGACATCCAGCGCTCGCAAGGCCGCTACTGGGAATGTATCCCGGGCGC
AGAGATGGTTCCCGGTCGCGCTCTCAGCGCGTTTATTCATGGGCGAGTTT
GTCGTCAAGGCCAAATCTGAGCGTTTCTCTCGGATGAAGGATATTATGCC
GATATTATGGCTTTCGATTGCTACTGCGCAATCTGCGGTGTTGGTTTCTG
TGGCATGCACATCGAGGCGCCGTCGGAGACGGCCCTCGAGCGCCGCAGGC
GGTGGATCGAAAAGCGATGCCGGGCGCTGCAAGCCGGCGAAGACTTCAGG
CAGGTGTCGCACGAGGGAGAGGAAAATGAGGAGCCCGTCCGCAGCTACGA
CCCTCGCATCGTGGGCTGGGACAATATTTCCTGGTTGTATAAGGCACACT
GCCTGGGTGTGGATGAAAATGCCAAATCGGGTGCGCCAAATACTGTGCCG
CCCACCCGGTAGAAACACCCGGACTCGACGAATACCTTCAAAGCAATATG
GAGACAAATAGCGGCTTGAAGACTCCGTTCGCGAAGCTGGATCTCCGCGA
CCGGAAGCCTATCAGCCCATTCGGCAAACTGCCCCTTGAAATCGTTTATC
AGATCTGCAAATTCTTGCCTAGCGATTCGCTGAAAGCACTGGCCGAAGCC
TCGTTGTACATCCACCTCGTCACCCAGGACAACCTATTCTGGAAACAGTT
TATGCAGAGCAACATGCCCTGGTTCTGGGAGCTTCAGGCAGCAAAGAACC
AGAAGATCCCCGCGGATCTCAATTATAAGAGGATGTACATGTGGCTCGAT
AAGATGACTGCTCCGCGGTACGGCATGGACGATGTGAAACTGATTGGTGT
CGCCAACCGGAGACGCATCTGGGGTGTATGCGAGGATCTTGCGGATCGGT
ACTCCAAGAGCCTGAATCAGCCCACAGTTAGTGCGATGCAGTGGGGAAGT
GGCTGACTATGGCCATGGCTCGGAGGAAGCGCCCGGTCCTGTCTTACCGT
TCCACTGGGGCTGTTTTGAAATCTTGACTCGCGCACTGACGGGGACGACT
GACACTAAAAACGTCAACCTGGACGTGTTGTACAATATCATGACGCCGTT
GTGCAACATGTCCGGGTCTGCCCTGCAATTGAACTACGGAGACGACATCC
AGCGCTCGCAAGGCCGCTACTGGGAATGTATCCCGGGCGCAGAGATGGTT
CCCGGTCGCGCTCTCAGCGCGTTTATTCATGGGCGAGTTTGTCGTCAAGG
CCAAATCTGAGCGTTTCTCTCGGATGAAGGATATTATGCCGATATTATGG
CTTTCGATTGCTACTGCGCAATCTGCGGTGTTGGTTTCTGTGGCATGCAC
ATCGAGGCGCCGTCGGAGACGGCCCTCGAGCGCCGCAGGCGGTGGATCGA
AAAGCGATGCCGGGCGCTGCAAGCCGGCGAAGACTTCAGGCAGGTGTCGC
ACGAGGGAGAGGAAAATGAGGAGCCCGTCCGCAGCTACGACCCTCGCATC
GTGGGCTGGGACAATATTTCCTGGTTGTATAAGGCACACTGCCTGGGTGT
GGATGAAAATGCCAAATCGGGTGCGCCAAATACTGTGCCGCCCACCCGGT
AGAAACACCCGGACTCGACGAATACCTTCAAAGCAATATGGAGACAAATA
GCGGCTTGAAGACTCCGTTCGCGAAGCTGGATCTCCGCGACCGGAAGCCT
ATCAGCCCATTCGGCAAACTGCCCCTTGAAATCGTTTATCAGATCTGCAA
ATTCTTGCCTAGCGATTCGCTGAAAGCACTGGCCGAAGCCTCGTTGTACA
TCCACCTCGTCACCCAGGACAACCTATTCTGGAAACAGTTTATGCAGAGC
AACATGCCCTGGTTCTGGGAGCTTCAGGCAGCAAAGAACCAGAAGATCCC
CGCGGATCTCAATTATAAGAGGATGTACATGTGGCTCGATAAGATGACTG
CTCCGCGGTACGGCATGGACGATGTGAAACTGATTGGTGTCGCCAACCGG
AGACGCATCTGGGGTGTATGCGAGGATCTTGCGGATCGGTACTCCAAGAG
CCTGAATCAGCCCACAGTTAGTGCGATGCAGTGGGGAAGTGGCTGACTAT
GGCCATGGCTCGGAGGAAGCGCCCGGTCCTGTCTTACCGTTCCACTGGGG
CTGTTTTGAAATCTTGACTCGCGCACTGACGGGGACGACTGACACTAAAA
ACGTCAACCTGGACGTGTTGTACAATATCATGACGCCGTTGTGCAACATG
TCCGGGTCTGCCCTGCAATTGAACTACGGAGACGACATCCAGCGCTCGCA
AGGCCGCTACTGGGAATGTATCCCGGGCGCAGAGATGGTTCCCGGTCGCG
CTCTCAGCGCGTTTATTCATGGGCGAGTTTGTCGTCAAGGCCAAATCTGA
GCGTTTCTCTCGGATGAAGGATATTATGCCGATATTATGGCTTTCGATTG
CTACTGCGCAATCTGCGGTGTTGGTTTCTGTGGCATGCACATCGAGGCGC
CGTCGGAGACGGCCCTCGAGCGCCGCAGGCGGTGGATCGAAAAGCGATGC
CGGGCGCTGCAAGCCGGCGAAGACTTCAGGCAGGTGTCGCACGAGGGAGA
GGAAAATGAGGAGCCCGTCCGCAGCTACGACCCTCGCATCGTGGGCTGGG
ACAATATTTCCTGGTTGTATAAGGCACACTGCCTGGGTGTGGATGAAAAT
GCCAAATCGGGTGCGCCAAATACTGTGCCGCCCACCCGGTAGAAACACCC
GGACTCGACGAATACCTTCAAAGCAATATGGAGACAAATAGCGGCTTGAA
GACTCCGTTCGCGAAGCTGGATCTCCGCGACCGGAAGCCTATCAGCCCAT
TCGGCAAACTGCCCCTTGAAATCGTTTATCAGATCTGCAAATTCTTGCCT
AGCGATTCGCTGAAAGCACTGGCCGAAGCCTCGTTGTACATCCACCTCGT
CACCCAGGACAACCTATTCTGGAAACAGTTTATGCAGAGCAACATGCCCT
GGTTCTGGGAGCTTCAGGCAGCAAAGAACCAGAAGATCCCCGCGGATCTC
AATTATAAGAGGATGTACATGTGGCTCGATAAGATGACTGCTCCGCGGTA
CGGCATGGACGATGTGAAACTGATTGGTGTCGCCAACCGGAGACGCATCT
GGGGTGTATGCGAGGATCTTGCGGATCGGTACTCCAAGAGCCTGAATCAG
CCCACAGTTAGTGCGATGCAGTGGGGAAGTGGCTGACTATGGCCATGGCT
CGGAGGAAGCGCCCGGTCCTGTCTTACCGTTCCACTGGGGCTGTTTTGAA
ATCTTGACTCGCGCACTGACGGGGACGACTGACACTAAAAACGTCAACCT
GGACGTGTTGTACAATATCATGACGCCGTTGTGCAACATGTCCGGGTCTG
CCCTGCAATTGAACTACGGAGACGACATCCAGCGCTCGCAAGGCCGCTAC
TGGGAATGTATCCCGGGCGCAGAGATGGTTCCCGGTCGCGCTCTCAGCGC
GTTTATTCATGGGCGAGTTTGTCGTCAAGGCCAAATCTGAGCGTTTCTCT
CGGATGAAGGATATTATGCCGATATTATGGCTTTCGATTGCTACTGCGCA
ATCTGCGGTGTTGGTTTCTGTGGCATGCACATCGAGGCGCCGTCGGAGAC
GGCCCTCGAGCGCCGCAGGCGGTGGATCGAAAAGCGATGCCGGGCGCTGC
AAGCCGGCGAAGACTTCAGGCAGGTGTCGCACGAGGGAGAGGAAAATGAG
GAGCCCGTCCGCAGCTACGACCCTCGCATCGTGGGCTGGGACAATATTTC
CTGGTTGTATAAGGCACACTGCCTGGGTGTGGATGAAAATGCCAAATCGG
GTGCGCCAAATACTGTGCCGCCCACCCGGTAGAAACACCCGGACTCGACG
AATACCTTCAAAGCAATATGGAGACAAATAGCGGCTTGAAGACTCCGTTC
GCGAAGCTGGATCTCCGCGACCGGAAGCCTATCAGCCCATTCGGCAAACT
GCCCCTTGAAATCGTTTATCAGATCTGCAAATTCTTGCCTAGCGATTCGC
TGAAAGCACTGGCCGAAGCCTCGTTGTACATCCACCTCGTCACCCAGGAC
AACCTATTCTGGAAACAGTTTATGCAGAGCAACATGCCCTGGTTCTGGGA
GCTTCAGGCAGCAAAGAACCAGAAGATCCCCGCGGATCTCAATTATAAGA
GGATGTACATGTGGCTCGATAAGATGACTGCTCCGCGGTACGGCATGGAC
GATGTGAAACTGATTGGTGTCGCCAACCGGAGACGCATCTGGGGTGTATG
CGAGGATCTTGCGGATCGGTACTCCAAGAGCCTGAATCAGCCCACAGTTA
GTGCGATGCAGTGGGGAAGTGGCTGACTATGGCCATGGCTCGGAGGAAGC
GCCCGGTCCTGTCTTACCGTTCCACTGGGGCTGTTTTGAAATCTTGACTC
GCGCACTGACGGGGACGACTGACACTAAAAACGTCAACCTGGACGTGTTG
TACAATATCATGACGCCGTTGTGCAACATGTCCGGGTCTGCCCTGCAATT
GAACTACGGAGACGACATCCAGCGCTCGCAAGGCCGCTACTGGGAATGTA
TCCCGGGCGCAGAGATGGTTCCCGGTCGCGCTCTCAGCGCGTTTATTCAT
GGGCGAGTTTGTCGTCAAGGCCAAATCTGAGCGTTTCTCTCGGATGAAGG
ATATTATGCCGATATTATGGCTTTCGATTGCTACTGCGCAATCTGCGGTG
TTGGTTTCTGTGGCATGCACATCGAGGCGCCGTCGGAGACGGCCCTCGAG
CGCCGCAGGCGGTGGATCGAAAAGCGATGCCGGGCGCTGCAAGCCGGCGA
AGACTTCAGGCAGGTGTCGCACGAGGGAGAGGAAAATGAGGAGCCCGTCC
GCAGCTACGACCCTCGCATCGTGGGCTGGGACAATATTTCCTGGTTGTAT
AAGGCACACTGCCTGGGTGTGGATGAAAATGCCAAATCGGGTGCGCCAAA
TACTGTGCCGCCCACCCGGTAGAAACACCCGGACTCGACGAATACCTTCA
AAGCAATATGGAGACAAATAGCGGCTTGAAGACTCCGTTCGCGAAGCTGG
ATCTCCGCGACCGGAAGCCTATCAGCCCATTCGGCAAACTGCCCCTTGAA
ATCGTTTATCAGATCTGCAAATTCTTGCCTAGCGATTCGCTGAAAGCACT
GGCCGAAGCCTCGTTGTACATCCACCTCGTCACCCAGGACAACCTATTCT
GGAAACAGTTTATGCAGAGCAACATGCCCTGGTTCTGGGAGCTTCAGGCA
GCAAAGAACCAGAAGATCCCCGCGGATCTCAATTATAAGAGGATGTACAT
GTGGCTCGATAAGATGACTGCTCCGCGGTACGGCATGGACGATGTGAAAC
TGATTGGTGTCGCCAACCGGAGACGCATCTGGGGTGTATGCGAGGATCTT
GCGGATCGGTACTCCAAGAGCCTGAATCAGCCCACAGTTAGTGCGATGCA
GTGGGGAAGTGGCTGACTATGGCCATGGCTCGGAGGAAGCGCCCGGTCCT
GTCTTACCGTTCCACTGGGGCTGTTTTGAAATCTTGACTCGCGCACTGAC
GGGGACGACTGACACTAAAAACGTCAACCTGGACGTGTTGTACAATATCA
TGACGCCGTTGTGCAACATGTCCGGGTCTGCCCTGCAATTGAACTACGGA
GACGACATCCAGCGCTCGCAAGGCCGCTACTGGGAATGTATCCCGGGCGC
AGAGATGGTTCCCGGTCGCGCTCTCAGCGCGTTTATTCATGGGCGAGTTT
GTCGTCAAGGCCAAATCTGAGCGTTTCTCTCGGATGAAGGATATTATGCC
GATATTATGGCTTTCGATTGCTACTGCGCAATCTGCGGTGTTGGTTTCTG
TGGCATGCACATCGAGGCGCCGTCGGAGACGGCCCTCGAGCGCCGCAGGC
GGTGGATCGAAAAGCGATGCCGGGCGCTGCAAGCCGGCGAAGACTTCAGG
CAGGTGTCGCACGAGGGAGAGGAAAATGAGGAGCCCGTCCGCAGCTACGA
CCCTCGCATCGTGGGCTGGGACAATATTTCCTGGTTGTATAAGGCACACT
GCCTGGGTGTGGATGAAAATGCCAAATCGGGTGCGCCAAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001738-T1.utr3p1 | KJC3_001738-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001738-T1.utr5p1 | KJC3_001738-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036047 |
| DBxref | InterPro:IPR001810 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:545227..548118 - |
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