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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:558661..560734- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001742-T1 ID=KJC3_001742-T1|Name=KJC3_001742-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2074bp|location=Sequence derived from alignment at ch2:558661..560734- (Aspergillus niger KJC3)
GCTGAGGTTTTCACTTATAATGCGCTTGCGTTTGGTCATGGCTACTTCGC
AATGCATCTCCGTTCAGCTGCAGTTCCCTGTCCTTGGTGAGACTTCGTTG
TTTGTTCGTCCCTCTATACATCCATCTATATAAGCGGCCCAACAGGTTAT
CATGGCACACAGCAGCGATGATCCGAACCCGATCGATCAAAATCTACCGC
TATCGGAATATAAGCCAGAACTGCACCATGATATACACTCTGGAGTCATT
CGCGGTCATGCGTACACGAACACAACGCCACTGTCGGATCCTGATTTTAT
AGTCAAGTTCGAAAAGGGTGATTCTGGCGACCCAAGGAACTTCGGCAGCT
GGCACAAGGTTTATATTACCTGCCAATTGAGTATGCTCACTTTTGTTGCG
GCATTGGCTTCATCCATATTGTCTCCGGGACAATCAGATATAGCGGAGTA
TACCAACATCAGCTCCGAGGTCGCAGTGCTTGCGACTTCGTTGTACATCC
TTGGTTCGTCACTTCTTCATTCAACTACAGACTCATCTGCTCACTTCTGC
AGGCTGGGCGGTTGGTCCAACCATATGGGGCCCAATAAGCGAGGTTTATG
GCCGCAAATGGGGAATGCTTCCAGCTCTCTTTTGCTTAGGCTTGTTCAGC
ATTGGAACGGCAGTAAGCAAGAACGCTGCCAGCATATTCATTACCAGGTT
CATTGGTGGTATATTTGGCTCTGCACCCATTAGCAATGCAAATGCTGCGT
TAAGCGACGTTTACGCACCGAAAGAGCGAGGAATAGCAGTGGCATTCATG
ATGCTGTGTATCACAGGAGGGCCATCTGTCGGACCTCTCATTGGCTCTGC
AGTGGTGGCAAACTCGAAACTTGGATGGCGCTGTAAGTCTCATGCATTGG
AGCTTCTATTGCGTGGACTAAAAAGTTCAGGGACGATGTATATCGAAGCT
ATCTGCTGCTTTGGCTTATTCGCCCTTGCCACCTTGACGCTGTCTGAAAC
GTATTCTCCTGTCTTGTTGAGAAATAAGGCACAGAGAATGCGCAGGACGA
CAGGAGATAGGAGATACTGGCACCCTCATGAGCACGAGAGCATTAATCTA
GAGAATGCAGCCACGAAACATTTCATTCGCCCATTACGGTGTGTCACCAT
GCCTAACCTAAGTCGTGAACCGTCTCTGACTCCCCTAGCATGTTGACAAG
CGAGAGCATCATGGCCTGCGTTGCGGCATATGCATCTTTCTCATATAGTT
TGATTTATCTATGTCTCCAGGTGTACCCCATTGTGTTTGAAGAGGAACGT
GGATACAGTCCAGTGATTGCTTCCTTGCCATTTCTCGGGATCCTGGTCGG
CACAGCTTGCGCTGTCGGAATCACCTTTGCGTATCGAACACAGTATGCAA
AAGCGGTTATGGAAAACGATGGAAAAGCCGTTCCTGAAGCGCGACTTCCC
CCGCTGGTACTTGGGGGAATTGTCCTGCCATCAGGATTCTTTTGGCTTGG
ATGGACTGCAGCACCAAAGTACTCGTGGGTACTGCCCACAGTTGCAGGAG
GTATGCCATAAAATCTTCCGACGATGTAAGACTATATTGTAACATCTATG
CAGTATTCGTCGGTGCCGGAAACAACATCATCTTCCAGCAATGTATCAAC
TATTTAATCGACACCTACGGGCCATATGCAGCGAGCGCGATCTCAGCAAC
CACCATACTGAGATCCTTGTTGGCGGCGGGGCTGCCGTTGGCGGCGAAGC
CCATGTTCCACAATCTCGGCGTGGGACCTGCTGCTAGTTTAATGGGAGGC
ATTGCTTGCCTGGCATTGCCGATACCGTTCGTCTTCATGAAGTATGGACG
CACCCTGCGCGAGAAGTCAAAAATCGCACCAACCAGTTCAGACTAGTTCC
CCTTGACATACCGCTGGCAAAACAAGAATATCCCGCTACCCCGCGTCGGA
GGTGGTATGATGACCGACCTCCGACTGGAAATTACTCCATGATATACAGA
CAGCTTGAATATTGTGACCTGCTGCCTTCGTAATAAATCCGTTCTCTCTT
TTAGTGAAATACAATGGAATTCCG back to topCoding sequence (CDS) from alignment at ch2:558661..560734- >KJC3_001742-T1 ID=KJC3_001742-T1|Name=KJC3_001742-T1|organism=Aspergillus niger KJC3|type=CDS|length=7725bp|location=Sequence derived from alignment at ch2:558661..560734- (Aspergillus niger KJC3)
TATTCGTCGGTGCCGGAAACAACATCATCTTCCAGCAATGTATCAACTAT
TTAATCGACACCTACGGGCCATATGCAGCGAGCGCGATCTCAGCAACCAC
CATACTGAGATCCTTGTTGGCGGCGGGGCTGCCGTTGGCGGCGAAGCCCA
TGTTCCACAATCTCGGCGTGGGACCTGCTGCTAGTTTAATGGGAGGCATT
GCTTGCCTGGCATTGCCGATACCGTTCGTCTTCATGAAGTATGGACGCAC
CCTGCGCGAGAAGTCAAAAATCGCACCAACCAGTTCAGACTAGCATGTTG
ACAAGCGAGAGCATCATGGCCTGCGTTGCGGCATATGCATCTTTCTCATA
TAGTTTGATTTATCTATGTCTCCAGGTGTACCCCATTGTGTTTGAAGAGG
AACGTGGATACAGTCCAGTGATTGCTTCCTTGCCATTTCTCGGGATCCTG
GTCGGCACAGCTTGCGCTGTCGGAATCACCTTTGCGTATCGAACACAGTA
TGCAAAAGCGGTTATGGAAAACGATGGAAAAGCCGTTCCTGAAGCGCGAC
TTCCCCCGCTGGTACTTGGGGGAATTGTCCTGCCATCAGGATTCTTTTGG
CTTGGATGGACTGCAGCACCAAAGTACTCGTGGGTACTGCCCACAGTTGC
AGGAGGGACGATGTATATCGAAGCTATCTGCTGCTTTGGCTTATTCGCCC
TTGCCACCTTGACGCTGTCTGAAACGTATTCTCCTGTCTTGTTGAGAAAT
AAGGCACAGAGAATGCGCAGGACGACAGGAGATAGGAGATACTGGCACCC
TCATGAGCACGAGAGCATTAATCTAGAGAATGCAGCCACGAAACATTTCA
TTCGCCCATTACGGCTGGGCGGTTGGTCCAACCATATGGGGCCCAATAAG
CGAGGTTTATGGCCGCAAATGGGGAATGCTTCCAGCTCTCTTTTGCTTAG
GCTTGTTCAGCATTGGAACGGCAGTAAGCAAGAACGCTGCCAGCATATTC
ATTACCAGGTTCATTGGTGGTATATTTGGCTCTGCACCCATTAGCAATGC
AAATGCTGCGTTAAGCGACGTTTACGCACCGAAAGAGCGAGGAATAGCAG
TGGCATTCATGATGCTGTGTATCACAGGAGGGCCATCTGTCGGACCTCTC
ATTGGCTCTGCAGTGGTGGCAAACTCGAAACTTGGATGGCGCTATGGCAC
ACAGCAGCGATGATCCGAACCCGATCGATCAAAATCTACCGCTATCGGAA
TATAAGCCAGAACTGCACCATGATATACACTCTGGAGTCATTCGCGGTCA
TGCGTACACGAACACAACGCCACTGTCGGATCCTGATTTTATAGTCAAGT
TCGAAAAGGGTGATTCTGGCGACCCAAGGAACTTCGGCAGCTGGCACAAG
GTTTATATTACCTGCCAATTGAGTATGCTCACTTTTGTTGCGGCATTGGC
TTCATCCATATTGTCTCCGGGACAATCAGATATAGCGGAGTATACCAACA
TCAGCTCCGAGGTCGCAGTGCTTGCGACTTCGTTGTACATCCTTGTATTC
GTCGGTGCCGGAAACAACATCATCTTCCAGCAATGTATCAACTATTTAAT
CGACACCTACGGGCCATATGCAGCGAGCGCGATCTCAGCAACCACCATAC
TGAGATCCTTGTTGGCGGCGGGGCTGCCGTTGGCGGCGAAGCCCATGTTC
CACAATCTCGGCGTGGGACCTGCTGCTAGTTTAATGGGAGGCATTGCTTG
CCTGGCATTGCCGATACCGTTCGTCTTCATGAAGTATGGACGCACCCTGC
GCGAGAAGTCAAAAATCGCACCAACCAGTTCAGACTAGCATGTTGACAAG
CGAGAGCATCATGGCCTGCGTTGCGGCATATGCATCTTTCTCATATAGTT
TGATTTATCTATGTCTCCAGGTGTACCCCATTGTGTTTGAAGAGGAACGT
GGATACAGTCCAGTGATTGCTTCCTTGCCATTTCTCGGGATCCTGGTCGG
CACAGCTTGCGCTGTCGGAATCACCTTTGCGTATCGAACACAGTATGCAA
AAGCGGTTATGGAAAACGATGGAAAAGCCGTTCCTGAAGCGCGACTTCCC
CCGCTGGTACTTGGGGGAATTGTCCTGCCATCAGGATTCTTTTGGCTTGG
ATGGACTGCAGCACCAAAGTACTCGTGGGTACTGCCCACAGTTGCAGGAG
GGACGATGTATATCGAAGCTATCTGCTGCTTTGGCTTATTCGCCCTTGCC
ACCTTGACGCTGTCTGAAACGTATTCTCCTGTCTTGTTGAGAAATAAGGC
ACAGAGAATGCGCAGGACGACAGGAGATAGGAGATACTGGCACCCTCATG
AGCACGAGAGCATTAATCTAGAGAATGCAGCCACGAAACATTTCATTCGC
CCATTACGGCTGGGCGGTTGGTCCAACCATATGGGGCCCAATAAGCGAGG
TTTATGGCCGCAAATGGGGAATGCTTCCAGCTCTCTTTTGCTTAGGCTTG
TTCAGCATTGGAACGGCAGTAAGCAAGAACGCTGCCAGCATATTCATTAC
CAGGTTCATTGGTGGTATATTTGGCTCTGCACCCATTAGCAATGCAAATG
CTGCGTTAAGCGACGTTTACGCACCGAAAGAGCGAGGAATAGCAGTGGCA
TTCATGATGCTGTGTATCACAGGAGGGCCATCTGTCGGACCTCTCATTGG
CTCTGCAGTGGTGGCAAACTCGAAACTTGGATGGCGCTATGGCACACAGC
AGCGATGATCCGAACCCGATCGATCAAAATCTACCGCTATCGGAATATAA
GCCAGAACTGCACCATGATATACACTCTGGAGTCATTCGCGGTCATGCGT
ACACGAACACAACGCCACTGTCGGATCCTGATTTTATAGTCAAGTTCGAA
AAGGGTGATTCTGGCGACCCAAGGAACTTCGGCAGCTGGCACAAGGTTTA
TATTACCTGCCAATTGAGTATGCTCACTTTTGTTGCGGCATTGGCTTCAT
CCATATTGTCTCCGGGACAATCAGATATAGCGGAGTATACCAACATCAGC
TCCGAGGTCGCAGTGCTTGCGACTTCGTTGTACATCCTTGTATTCGTCGG
TGCCGGAAACAACATCATCTTCCAGCAATGTATCAACTATTTAATCGACA
CCTACGGGCCATATGCAGCGAGCGCGATCTCAGCAACCACCATACTGAGA
TCCTTGTTGGCGGCGGGGCTGCCGTTGGCGGCGAAGCCCATGTTCCACAA
TCTCGGCGTGGGACCTGCTGCTAGTTTAATGGGAGGCATTGCTTGCCTGG
CATTGCCGATACCGTTCGTCTTCATGAAGTATGGACGCACCCTGCGCGAG
AAGTCAAAAATCGCACCAACCAGTTCAGACTAGCATGTTGACAAGCGAGA
GCATCATGGCCTGCGTTGCGGCATATGCATCTTTCTCATATAGTTTGATT
TATCTATGTCTCCAGGTGTACCCCATTGTGTTTGAAGAGGAACGTGGATA
CAGTCCAGTGATTGCTTCCTTGCCATTTCTCGGGATCCTGGTCGGCACAG
CTTGCGCTGTCGGAATCACCTTTGCGTATCGAACACAGTATGCAAAAGCG
GTTATGGAAAACGATGGAAAAGCCGTTCCTGAAGCGCGACTTCCCCCGCT
GGTACTTGGGGGAATTGTCCTGCCATCAGGATTCTTTTGGCTTGGATGGA
CTGCAGCACCAAAGTACTCGTGGGTACTGCCCACAGTTGCAGGAGGGACG
ATGTATATCGAAGCTATCTGCTGCTTTGGCTTATTCGCCCTTGCCACCTT
GACGCTGTCTGAAACGTATTCTCCTGTCTTGTTGAGAAATAAGGCACAGA
GAATGCGCAGGACGACAGGAGATAGGAGATACTGGCACCCTCATGAGCAC
GAGAGCATTAATCTAGAGAATGCAGCCACGAAACATTTCATTCGCCCATT
ACGGCTGGGCGGTTGGTCCAACCATATGGGGCCCAATAAGCGAGGTTTAT
GGCCGCAAATGGGGAATGCTTCCAGCTCTCTTTTGCTTAGGCTTGTTCAG
CATTGGAACGGCAGTAAGCAAGAACGCTGCCAGCATATTCATTACCAGGT
TCATTGGTGGTATATTTGGCTCTGCACCCATTAGCAATGCAAATGCTGCG
TTAAGCGACGTTTACGCACCGAAAGAGCGAGGAATAGCAGTGGCATTCAT
GATGCTGTGTATCACAGGAGGGCCATCTGTCGGACCTCTCATTGGCTCTG
CAGTGGTGGCAAACTCGAAACTTGGATGGCGCTATGGCACACAGCAGCGA
TGATCCGAACCCGATCGATCAAAATCTACCGCTATCGGAATATAAGCCAG
AACTGCACCATGATATACACTCTGGAGTCATTCGCGGTCATGCGTACACG
AACACAACGCCACTGTCGGATCCTGATTTTATAGTCAAGTTCGAAAAGGG
TGATTCTGGCGACCCAAGGAACTTCGGCAGCTGGCACAAGGTTTATATTA
CCTGCCAATTGAGTATGCTCACTTTTGTTGCGGCATTGGCTTCATCCATA
TTGTCTCCGGGACAATCAGATATAGCGGAGTATACCAACATCAGCTCCGA
GGTCGCAGTGCTTGCGACTTCGTTGTACATCCTTGTATTCGTCGGTGCCG
GAAACAACATCATCTTCCAGCAATGTATCAACTATTTAATCGACACCTAC
GGGCCATATGCAGCGAGCGCGATCTCAGCAACCACCATACTGAGATCCTT
GTTGGCGGCGGGGCTGCCGTTGGCGGCGAAGCCCATGTTCCACAATCTCG
GCGTGGGACCTGCTGCTAGTTTAATGGGAGGCATTGCTTGCCTGGCATTG
CCGATACCGTTCGTCTTCATGAAGTATGGACGCACCCTGCGCGAGAAGTC
AAAAATCGCACCAACCAGTTCAGACTAGCATGTTGACAAGCGAGAGCATC
ATGGCCTGCGTTGCGGCATATGCATCTTTCTCATATAGTTTGATTTATCT
ATGTCTCCAGGTGTACCCCATTGTGTTTGAAGAGGAACGTGGATACAGTC
CAGTGATTGCTTCCTTGCCATTTCTCGGGATCCTGGTCGGCACAGCTTGC
GCTGTCGGAATCACCTTTGCGTATCGAACACAGTATGCAAAAGCGGTTAT
GGAAAACGATGGAAAAGCCGTTCCTGAAGCGCGACTTCCCCCGCTGGTAC
TTGGGGGAATTGTCCTGCCATCAGGATTCTTTTGGCTTGGATGGACTGCA
GCACCAAAGTACTCGTGGGTACTGCCCACAGTTGCAGGAGGGACGATGTA
TATCGAAGCTATCTGCTGCTTTGGCTTATTCGCCCTTGCCACCTTGACGC
TGTCTGAAACGTATTCTCCTGTCTTGTTGAGAAATAAGGCACAGAGAATG
CGCAGGACGACAGGAGATAGGAGATACTGGCACCCTCATGAGCACGAGAG
CATTAATCTAGAGAATGCAGCCACGAAACATTTCATTCGCCCATTACGGC
TGGGCGGTTGGTCCAACCATATGGGGCCCAATAAGCGAGGTTTATGGCCG
CAAATGGGGAATGCTTCCAGCTCTCTTTTGCTTAGGCTTGTTCAGCATTG
GAACGGCAGTAAGCAAGAACGCTGCCAGCATATTCATTACCAGGTTCATT
GGTGGTATATTTGGCTCTGCACCCATTAGCAATGCAAATGCTGCGTTAAG
CGACGTTTACGCACCGAAAGAGCGAGGAATAGCAGTGGCATTCATGATGC
TGTGTATCACAGGAGGGCCATCTGTCGGACCTCTCATTGGCTCTGCAGTG
GTGGCAAACTCGAAACTTGGATGGCGCTATGGCACACAGCAGCGATGATC
CGAACCCGATCGATCAAAATCTACCGCTATCGGAATATAAGCCAGAACTG
CACCATGATATACACTCTGGAGTCATTCGCGGTCATGCGTACACGAACAC
AACGCCACTGTCGGATCCTGATTTTATAGTCAAGTTCGAAAAGGGTGATT
CTGGCGACCCAAGGAACTTCGGCAGCTGGCACAAGGTTTATATTACCTGC
CAATTGAGTATGCTCACTTTTGTTGCGGCATTGGCTTCATCCATATTGTC
TCCGGGACAATCAGATATAGCGGAGTATACCAACATCAGCTCCGAGGTCG
CAGTGCTTGCGACTTCGTTGTACATCCTTGTATTCGTCGGTGCCGGAAAC
AACATCATCTTCCAGCAATGTATCAACTATTTAATCGACACCTACGGGCC
ATATGCAGCGAGCGCGATCTCAGCAACCACCATACTGAGATCCTTGTTGG
CGGCGGGGCTGCCGTTGGCGGCGAAGCCCATGTTCCACAATCTCGGCGTG
GGACCTGCTGCTAGTTTAATGGGAGGCATTGCTTGCCTGGCATTGCCGAT
ACCGTTCGTCTTCATGAAGTATGGACGCACCCTGCGCGAGAAGTCAAAAA
TCGCACCAACCAGTTCAGACTAGCATGTTGACAAGCGAGAGCATCATGGC
CTGCGTTGCGGCATATGCATCTTTCTCATATAGTTTGATTTATCTATGTC
TCCAGGTGTACCCCATTGTGTTTGAAGAGGAACGTGGATACAGTCCAGTG
ATTGCTTCCTTGCCATTTCTCGGGATCCTGGTCGGCACAGCTTGCGCTGT
CGGAATCACCTTTGCGTATCGAACACAGTATGCAAAAGCGGTTATGGAAA
ACGATGGAAAAGCCGTTCCTGAAGCGCGACTTCCCCCGCTGGTACTTGGG
GGAATTGTCCTGCCATCAGGATTCTTTTGGCTTGGATGGACTGCAGCACC
AAAGTACTCGTGGGTACTGCCCACAGTTGCAGGAGGGACGATGTATATCG
AAGCTATCTGCTGCTTTGGCTTATTCGCCCTTGCCACCTTGACGCTGTCT
GAAACGTATTCTCCTGTCTTGTTGAGAAATAAGGCACAGAGAATGCGCAG
GACGACAGGAGATAGGAGATACTGGCACCCTCATGAGCACGAGAGCATTA
ATCTAGAGAATGCAGCCACGAAACATTTCATTCGCCCATTACGGCTGGGC
GGTTGGTCCAACCATATGGGGCCCAATAAGCGAGGTTTATGGCCGCAAAT
GGGGAATGCTTCCAGCTCTCTTTTGCTTAGGCTTGTTCAGCATTGGAACG
GCAGTAAGCAAGAACGCTGCCAGCATATTCATTACCAGGTTCATTGGTGG
TATATTTGGCTCTGCACCCATTAGCAATGCAAATGCTGCGTTAAGCGACG
TTTACGCACCGAAAGAGCGAGGAATAGCAGTGGCATTCATGATGCTGTGT
ATCACAGGAGGGCCATCTGTCGGACCTCTCATTGGCTCTGCAGTGGTGGC
AAACTCGAAACTTGGATGGCGCTATGGCACACAGCAGCGATGATCCGAAC
CCGATCGATCAAAATCTACCGCTATCGGAATATAAGCCAGAACTGCACCA
TGATATACACTCTGGAGTCATTCGCGGTCATGCGTACACGAACACAACGC
CACTGTCGGATCCTGATTTTATAGTCAAGTTCGAAAAGGGTGATTCTGGC
GACCCAAGGAACTTCGGCAGCTGGCACAAGGTTTATATTACCTGCCAATT
GAGTATGCTCACTTTTGTTGCGGCATTGGCTTCATCCATATTGTCTCCGG
GACAATCAGATATAGCGGAGTATACCAACATCAGCTCCGAGGTCGCAGTG
CTTGCGACTTCGTTGTACATCCTTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001742-T1.utr3p1 | KJC3_001742-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001742-T1.utr5p1 | KJC3_001742-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:558661..560734 - |
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