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KJC3_001765-T1, KJC3_001765-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001765-T1
Unique NameKJC3_001765-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:620646..622116-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001765-T1 ID=KJC3_001765-T1|Name=KJC3_001765-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1471bp|location=Sequence derived from alignment at ch2:620646..622116- (Aspergillus niger KJC3)
AAACCACCTGCTGCTTTCTCGCACTTGGTCGGCCGTGTGCTTGTAGATAT
CCATTGCTAGACTGCTACTTTTTTGAAGCGAGCCAATATGTCTGCCAAGG
ACCTGACCACACGAGAATGGATCAATGCTTTAATTGAACCTGGCCATCTT
CTCGTCTGGGCCCTGCGCTGTAAGTGTGACAACGCTGACATTCCCAAATA
TTGCTCTGTCACTGGGACAGAACGTCTCAACAGAAGTGACGGATATCTAA
CACACCGAGTAGATTACGTCAAAGTCAATCTTGAGACCGTCTTTTGCAAA
GGACAAATCTTCGCCCCTCTACTCCATCAAAGCAGATTGCGTGATGAAGC
ATTCGGCAAATTTTGGGTAGCTTTCAGCAGTTAGTGCACCACTTCGCTCC
TATCCATGAGTGAACAGACCCCTTCCCTACCTGGAACCCATCCCATAACC
ACCCCTAACTTTCCCCAGCATACCTCCAAGCAAACGCCCCACCACCAGCT
ACCCAACCCCCAGATCAAATCATCCGCTCCTCAGATCTAATCCCAGTCCT
CCTCTCCCGCGCCTCGGGCACCGTCCTCGACGTCGGCCCTGGCACAGGCA
CCCAAATGCCCCTCCTCCGCTCCCCAGCCATCAAGACCATCTACGGCGCG
GAGCCCTGTCACGGCCTGCACGCCGAACTGCGCGCCAGCGCCACCTCCCA
AGGTCTAGAGGACAAATACAACATCCTCCCCTGTGGCGTAGAATCCGCAG
ATCTGATCCCTGCACTTCAAAAACAAGGCCTTCTCAAAACCGACACTTCA
GACGTGCCTTCCATCCTCGAGAACCTGTCCACAACTAAAGAAGGCGTATT
CGATACCATCGTCTGCGTGCGCGTCTTGTGCTCGGTCCCTGACATGCGTC
GCACCGTCCAGGATCTGTACACCCTCCTCCGACCAGGCGGGAAGATGCTT
GTCGTCGAGCATGTAGTTAACCCATGGCGGACGCCCAAGGGATCCGTGAT
CGCGAGAGTGGTCCAGGCATTTTATGGATTCTTGGGCTGGAGTTGGTATA
TGGGTAACTGCTGTATGAACCGGGATACCACGTCGGCGTTGAAGCATGCG
GCGGATCGGGATGGTGGGTGGGAGTCGGTTGAATTGGATAGCTGGTTTGA
GAGTACCCCGATGCCGTATGTGGCTGGCATTTTGACGAAGAAGGGGGGTG
TAAACTAGGACGGATGTTTGAAGGGTTCTATATATACCATAGGCGGCGTT
GGTCGGAGAGATCGGGGAGATCATGTTGTTCAGCTCTATCGTTCACTTTC
TATTACTCGCATAAATTGGACCCTGTAGCAGGATGGGAAAAGGCCAGAAC
GACATCGGACTTTCCCTAAGGATTCGATCTAGGAATGATGTACCCCGAAT
CAATGTCTTGTTATACCTAGCCTCCCAATCGTTATACGTATTGTTTATTG
TCAAGAAATACGGGATCGAGG
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Coding sequence (CDS) from alignment at ch2:620646..622116-

>KJC3_001765-T1 ID=KJC3_001765-T1|Name=KJC3_001765-T1|organism=Aspergillus niger KJC3|type=CDS|length=2817bp|location=Sequence derived from alignment at ch2:620646..622116- (Aspergillus niger KJC3)
CATACCTCCAAGCAAACGCCCCACCACCAGCTACCCAACCCCCAGATCAA
ATCATCCGCTCCTCAGATCTAATCCCAGTCCTCCTCTCCCGCGCCTCGGG
CACCGTCCTCGACGTCGGCCCTGGCACAGGCACCCAAATGCCCCTCCTCC
GCTCCCCAGCCATCAAGACCATCTACGGCGCGGAGCCCTGTCACGGCCTG
CACGCCGAACTGCGCGCCAGCGCCACCTCCCAAGGTCTAGAGGACAAATA
CAACATCCTCCCCTGTGGCGTAGAATCCGCAGATCTGATCCCTGCACTTC
AAAAACAAGGCCTTCTCAAAACCGACACTTCAGACGTGCCTTCCATCCTC
GAGAACCTGTCCACAACTAAAGAAGGCGTATTCGATACCATCGTCTGCGT
GCGCGTCTTGTGCTCGGTCCCTGACATGCGTCGCACCGTCCAGGATCTGT
ACACCCTCCTCCGACCAGGCGGGAAGATGCTTGTCGTCGAGCATGTAGTT
AACCCATGGCGGACGCCCAAGGGATCCGTGATCGCGAGAGTGGTCCAGGC
ATTTTATGGATTCTTGGGCTGGAGTTGGTATATGGGTAACTGCTGTATGA
ACCGGGATACCACGTCGGCGTTGAAGCATGCGGCGGATCGGGATGGTGGG
TGGGAGTCGGTTGAATTGGATAGCTGGTTTGAGAGTACCCCGATGCCGTA
TGTGGCTGGCATTTTGACGAAGAAGGGGGGTGTAAACTAGATTACGTCAA
AGTCAATCTTGAGACCGTCTTTTGCAAAGGACAAATCTTCGCCCCTCTAC
TCCATCAAAGCAGATTGCGTGATGAAGCATTCGGCAAATTTTGGGTAGCT
TTCAGCAATGTCTGCCAAGGACCTGACCACACGAGAATGGATCAATGCTT
TAATTGAACCTGGCCATCTTCTCGTCTGGGCCCTGCGCTCATACCTCCAA
GCAAACGCCCCACCACCAGCTACCCAACCCCCAGATCAAATCATCCGCTC
CTCAGATCTAATCCCAGTCCTCCTCTCCCGCGCCTCGGGCACCGTCCTCG
ACGTCGGCCCTGGCACAGGCACCCAAATGCCCCTCCTCCGCTCCCCAGCC
ATCAAGACCATCTACGGCGCGGAGCCCTGTCACGGCCTGCACGCCGAACT
GCGCGCCAGCGCCACCTCCCAAGGTCTAGAGGACAAATACAACATCCTCC
CCTGTGGCGTAGAATCCGCAGATCTGATCCCTGCACTTCAAAAACAAGGC
CTTCTCAAAACCGACACTTCAGACGTGCCTTCCATCCTCGAGAACCTGTC
CACAACTAAAGAAGGCGTATTCGATACCATCGTCTGCGTGCGCGTCTTGT
GCTCGGTCCCTGACATGCGTCGCACCGTCCAGGATCTGTACACCCTCCTC
CGACCAGGCGGGAAGATGCTTGTCGTCGAGCATGTAGTTAACCCATGGCG
GACGCCCAAGGGATCCGTGATCGCGAGAGTGGTCCAGGCATTTTATGGAT
TCTTGGGCTGGAGTTGGTATATGGGTAACTGCTGTATGAACCGGGATACC
ACGTCGGCGTTGAAGCATGCGGCGGATCGGGATGGTGGGTGGGAGTCGGT
TGAATTGGATAGCTGGTTTGAGAGTACCCCGATGCCGTATGTGGCTGGCA
TTTTGACGAAGAAGGGGGGTGTAAACTAGATTACGTCAAAGTCAATCTTG
AGACCGTCTTTTGCAAAGGACAAATCTTCGCCCCTCTACTCCATCAAAGC
AGATTGCGTGATGAAGCATTCGGCAAATTTTGGGTAGCTTTCAGCAATGT
CTGCCAAGGACCTGACCACACGAGAATGGATCAATGCTTTAATTGAACCT
GGCCATCTTCTCGTCTGGGCCCTGCGCTCATACCTCCAAGCAAACGCCCC
ACCACCAGCTACCCAACCCCCAGATCAAATCATCCGCTCCTCAGATCTAA
TCCCAGTCCTCCTCTCCCGCGCCTCGGGCACCGTCCTCGACGTCGGCCCT
GGCACAGGCACCCAAATGCCCCTCCTCCGCTCCCCAGCCATCAAGACCAT
CTACGGCGCGGAGCCCTGTCACGGCCTGCACGCCGAACTGCGCGCCAGCG
CCACCTCCCAAGGTCTAGAGGACAAATACAACATCCTCCCCTGTGGCGTA
GAATCCGCAGATCTGATCCCTGCACTTCAAAAACAAGGCCTTCTCAAAAC
CGACACTTCAGACGTGCCTTCCATCCTCGAGAACCTGTCCACAACTAAAG
AAGGCGTATTCGATACCATCGTCTGCGTGCGCGTCTTGTGCTCGGTCCCT
GACATGCGTCGCACCGTCCAGGATCTGTACACCCTCCTCCGACCAGGCGG
GAAGATGCTTGTCGTCGAGCATGTAGTTAACCCATGGCGGACGCCCAAGG
GATCCGTGATCGCGAGAGTGGTCCAGGCATTTTATGGATTCTTGGGCTGG
AGTTGGTATATGGGTAACTGCTGTATGAACCGGGATACCACGTCGGCGTT
GAAGCATGCGGCGGATCGGGATGGTGGGTGGGAGTCGGTTGAATTGGATA
GCTGGTTTGAGAGTACCCCGATGCCGTATGTGGCTGGCATTTTGACGAAG
AAGGGGGGTGTAAACTAGATTACGTCAAAGTCAATCTTGAGACCGTCTTT
TGCAAAGGACAAATCTTCGCCCCTCTACTCCATCAAAGCAGATTGCGTGA
TGAAGCATTCGGCAAATTTTGGGTAGCTTTCAGCAATGTCTGCCAAGGAC
CTGACCACACGAGAATGGATCAATGCTTTAATTGAACCTGGCCATCTTCT
CGTCTGGGCCCTGCGCT
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001765KJC3_001765Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001765-T1KJC3_001765-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001765-T1.cdsKJC3_001765-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001765-T1.utr3p1KJC3_001765-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001765-T1.exon3KJC3_001765-T1.exon3Aspergillus niger KJC3exon
KJC3_001765-T1.exon2KJC3_001765-T1.exon2Aspergillus niger KJC3exon
KJC3_001765-T1.exon1KJC3_001765-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001765-T1.utr5p1KJC3_001765-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR029063
DBxrefPFAM:PF13489
DBxrefPFAM:PF08241
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:620646..622116 -
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