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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:627893..630353+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001768-T1 ID=KJC3_001768-T1|Name=KJC3_001768-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2461bp|location=Sequence derived from alignment at ch2:627893..630353+ (Aspergillus niger KJC3)
GATCGAGTGGCGGGCATGTCAAAGAGTTGCAGCTGGTGAGCCGTGCTATG
CGCTCACGTTGTCTGTTGCACCCGCCGCCAGCACATTGCGAGTGTCTGCG
CCCCCCTTCAGAAATCAAGGTGGCAGAGATCGACGTCTTGTGTCCATGTT
GACTGGCCACATTCTCCGGGAGGAGTACCATGGGGCCATGTGAGTGCGTT
CCGACCCTTGCTGCCACGGGCCCCTGATGGCGGTCGGCGAACAAAGACTG
GGGAACCCCCACGCTGGATACAGCAAGTTTTGAGACAAATAATGAGGGAA
ACTCCTTCCCACCACCCAGCTGTAAGAAATCCAGTGAATTAACGGCCAGT
TGCAGGGGAAATCAGGGGATGCTGGTGGAAATGGCCGGTGGTTTCTTTGT
TTGATCCCTCACGTCACACAGCCTGACTTCCCGTGTCGTATTTTAGTCGG
TGGTCGCAGAATTAGCCTCCTCAGCCTCATCTATCTTCATCTCAGTTTAG
CTCGTTGCCAGTTCCCCAAAATGTCGTCCGCAACTGGGGAAGCGGGCAGC
ATCCAAAAGGGCGACCGGGTGGTGACGACGGGCTGTCATCCGTTGGAAGT
CGAAGCCGGCGAGGGAAATGGCGGGGAAACCGGCACGCGATATGACCACA
GCGACATGAACCGCATGGGCAAAGCGCAGGAGTTCAAGGTACGATATCTA
CAATTCTTCCGCGACTAGCACAGTAAGAATGAGTAGCTGACCTCGTATTC
AAATCTAGAGAAATCTCCGGCCTCTCGCTGCCTTAAGTTTCGCATCAGTC
TTGCAGGCGACCTGGGAGTTCATTTTAATGTACGGCATCATCTTCCTATC
ATCTCATACCACGCACATTCTTCCAGCACTAACGCATTCGAGTGACCAGA
TCCAACTATGAAGGTCTTGAAGACGGTGGAATGGCTGGCCTGGTGTGGAC
ATACGTGTGGACCTTTGTCGGATTCGGCTTCATCATCGTCTCCTTATCGG
AGATGGCATCCATGGCTCCAACATCAGGAGGACAGTACCACTGGGTGTCC
GAATTCGCCTCTCCCCGATACCAAAAGTTTCTCAGCTACATTACCGGATG
GATGTCCGTTCTCGCATGGCAAGCTGGCGCCGCATCAGGGTCCTTCCTGA
CCGGCACAATCATCCAAGGGCTCATCAGCGTGCGCAACCCCGATTACGAC
CCCAAGCGATGGCAAGGAACGCTCTTTGTTTTCGCCATGATCCTGATCAT
CTACTTCTTCAATGTCTACGCTGCCAGCTGGATGCCACGGATACAGAATG
CCCTGCTAGCCCTGCACACCATCTGCTGGGTAGTCGTGATTGTCGTCCTC
TGGGCCATGGCCCCACGCCAGTCCGCAAAGGCTGTATTCACCGAATTCAG
CCTCTACGGCGGCTGGAACAACGTCGGGTTAGCATTAATGATCGGGCAAA
TATCCGCCATCTACGGATCCCTTAGCTCAGACGCCACGGCACACATGTCA
GAAGAGGTCCGCGACGCCGGCCGATACGTCCCCATGGCCATCTGCGGCGG
CTACTTCAGCAACGGCATCCTAGCCCTCGTACTCATCATCACCCTCATGT
TCGCCATGCCCTCCGTAAAAGATGCCTTAGATGACCCAACCGGATTCCCC
TTCATCTACGTCTTCAAACAAGCCGTCTCAACCGCCGGCGTCAACGGCCT
CACCGCTATAATCCTCATCCCAGTCATCTTCAGCAACATCCTCTTCAACG
CCTCCACAGCCCGCCAGACCTACGCGTTTGCGCGCGACAGGGGCCTACCC
TTCTCAAACTGGATCTCAAAAGTCAACCAGCATTACAAACTGCCCGTGAA
CGCCATCGCCCTATCATGCATCATCAGTGGCCTTCTCTCCCTTATTAACA
TTGGCTCCGACACCGCCTTCAACGCCATCATCTCCCTAAACGTAGCAGCG
CTCATGTGGACCTACGCTATCTCCATCAGCTGCGTCATGTATCGCAAAAT
CTCCTGTCCGGACACATTACCCCCGCGACGGTGGAGTCTAGGGAAGCACG
GGATCTGGATTAATGCGGTAGCGTTAGTCTATGTGATCTTCGCGCTGTTT
TGGTCTTTCTGGCCAACTGAGATACCCGTGACCCTGAACAATTTCAATTG
GAGCGTGGTGCTCTTCGTGGGGGTGTTTGTTATTAGTTTGGCGATGTATA
TTGTTCAGGGGAGGAGGGTGTATAAGGGTCCTGTGGTGGATGTAAAAAGC
AGTTGAGGGGAAGTGATCTTAGTTGGCATGGGCAGGCATAAAGAATAACT
CTTTTCATATACATCGATTTAGTAATACGGTCTCAATATGGCACAGTTAC
TTGGAACACTAACCCTGTATATATCGGACAGTGGATATTGTAGTATTGCC
AACAACCGGAGACAACACAGCTACAAATGGTTTTGAAAACTGCGCAACAC
ATATTCCTGAC back to topCoding sequence (CDS) from alignment at ch2:627893..630353+ >KJC3_001768-T1 ID=KJC3_001768-T1|Name=KJC3_001768-T1|organism=Aspergillus niger KJC3|type=CDS|length=4788bp|location=Sequence derived from alignment at ch2:627893..630353+ (Aspergillus niger KJC3)
ATGTCGTCCGCAACTGGGGAAGCGGGCAGCATCCAAAAGGGCGACCGGGT
GGTGACGACGGGCTGTCATCCGTTGGAAGTCGAAGCCGGCGAGGGAAATG
GCGGGGAAACCGGCACGCGATATGACCACAGCGACATGAACCGCATGGGC
AAAGCGCAGGAGTTCAAGAGAAATCTCCGGCCTCTCGCTGCCTTAAGTTT
CGCATCAGTCTTGCAGGCGACCTGGGAGTTCATTTTAATATCCAACTATG
AAGGTCTTGAAGACGGTGGAATGGCTGGCCTGGTGTGGACATACGTGTGG
ACCTTTGTCGGATTCGGCTTCATCATCGTCTCCTTATCGGAGATGGCATC
CATGGCTCCAACATCAGGAGGACAGTACCACTGGGTGTCCGAATTCGCCT
CTCCCCGATACCAAAAGTTTCTCAGCTACATTACCGGATGGATGTCCGTT
CTCGCATGGCAAGCTGGCGCCGCATCAGGGTCCTTCCTGACCGGCACAAT
CATCCAAGGGCTCATCAGCGTGCGCAACCCCGATTACGACCCCAAGCGAT
GGCAAGGAACGCTCTTTGTTTTCGCCATGATCCTGATCATCTACTTCTTC
AATGTCTACGCTGCCAGCTGGATGCCACGGATACAGAATGCCCTGCTAGC
CCTGCACACCATCTGCTGGGTAGTCGTGATTGTCGTCCTCTGGGCCATGG
CCCCACGCCAGTCCGCAAAGGCTGTATTCACCGAATTCAGCCTCTACGGC
GGCTGGAACAACGTCGGGTTAGCATTAATGATCGGGCAAATATCCGCCAT
CTACGGATCCCTTAGCTCAGACGCCACGGCACACATGTCAGAAGAGGTCC
GCGACGCCGGCCGATACGTCCCCATGGCCATCTGCGGCGGCTACTTCAGC
AACGGCATCCTAGCCCTCGTACTCATCATCACCCTCATGTTCGCCATGCC
CTCCGTAAAAGATGCCTTAGATGACCCAACCGGATTCCCCTTCATCTACG
TCTTCAAACAAGCCGTCTCAACCGCCGGCGTCAACGGCCTCACCGCTATA
ATCCTCATCCCAGTCATCTTCAGCAACATCCTCTTCAACGCCTCCACAGC
CCGCCAGACCTACGCGTTTGCGCGCGACAGGGGCCTACCCTTCTCAAACT
GGATCTCAAAAGTCAACCAGCATTACAAACTGCCCGTGAACGCCATCGCC
CTATCATGCATCATCAGTGGCCTTCTCTCCCTTATTAACATTGGCTCCGA
CACCGCCTTCAACGCCATCATCTCCCTAAACGTAGCAGCGCTCATGTGGA
CCTACGCTATCTCCATCAGCTGCGTCATGTATCGCAAAATCTCCTGTCCG
GACACATTACCCCCGCGACGGTGGAGTCTAGGGAAGCACGGGATCTGGAT
TAATGCGGTAGCGTTAGTCTATGTGATCTTCGCGCTGTTTTGGTCTTTCT
GGCCAACTGAGATACCCGTGACCCTGAACAATTTCAATTGGAGCGTGGTG
CTCTTCGTGGGGGTGTTTGTTATTAGTTTGGCGATGTATATTGTTCAGGG
GAGGAGGGTGTATAAGGGTCCTGTGGTGGATGTAAAAAGCAGTTGAATGT
CGTCCGCAACTGGGGAAGCGGGCAGCATCCAAAAGGGCGACCGGGTGGTG
ACGACGGGCTGTCATCCGTTGGAAGTCGAAGCCGGCGAGGGAAATGGCGG
GGAAACCGGCACGCGATATGACCACAGCGACATGAACCGCATGGGCAAAG
CGCAGGAGTTCAAGAGAAATCTCCGGCCTCTCGCTGCCTTAAGTTTCGCA
TCAGTCTTGCAGGCGACCTGGGAGTTCATTTTAATATCCAACTATGAAGG
TCTTGAAGACGGTGGAATGGCTGGCCTGGTGTGGACATACGTGTGGACCT
TTGTCGGATTCGGCTTCATCATCGTCTCCTTATCGGAGATGGCATCCATG
GCTCCAACATCAGGAGGACAGTACCACTGGGTGTCCGAATTCGCCTCTCC
CCGATACCAAAAGTTTCTCAGCTACATTACCGGATGGATGTCCGTTCTCG
CATGGCAAGCTGGCGCCGCATCAGGGTCCTTCCTGACCGGCACAATCATC
CAAGGGCTCATCAGCGTGCGCAACCCCGATTACGACCCCAAGCGATGGCA
AGGAACGCTCTTTGTTTTCGCCATGATCCTGATCATCTACTTCTTCAATG
TCTACGCTGCCAGCTGGATGCCACGGATACAGAATGCCCTGCTAGCCCTG
CACACCATCTGCTGGGTAGTCGTGATTGTCGTCCTCTGGGCCATGGCCCC
ACGCCAGTCCGCAAAGGCTGTATTCACCGAATTCAGCCTCTACGGCGGCT
GGAACAACGTCGGGTTAGCATTAATGATCGGGCAAATATCCGCCATCTAC
GGATCCCTTAGCTCAGACGCCACGGCACACATGTCAGAAGAGGTCCGCGA
CGCCGGCCGATACGTCCCCATGGCCATCTGCGGCGGCTACTTCAGCAACG
GCATCCTAGCCCTCGTACTCATCATCACCCTCATGTTCGCCATGCCCTCC
GTAAAAGATGCCTTAGATGACCCAACCGGATTCCCCTTCATCTACGTCTT
CAAACAAGCCGTCTCAACCGCCGGCGTCAACGGCCTCACCGCTATAATCC
TCATCCCAGTCATCTTCAGCAACATCCTCTTCAACGCCTCCACAGCCCGC
CAGACCTACGCGTTTGCGCGCGACAGGGGCCTACCCTTCTCAAACTGGAT
CTCAAAAGTCAACCAGCATTACAAACTGCCCGTGAACGCCATCGCCCTAT
CATGCATCATCAGTGGCCTTCTCTCCCTTATTAACATTGGCTCCGACACC
GCCTTCAACGCCATCATCTCCCTAAACGTAGCAGCGCTCATGTGGACCTA
CGCTATCTCCATCAGCTGCGTCATGTATCGCAAAATCTCCTGTCCGGACA
CATTACCCCCGCGACGGTGGAGTCTAGGGAAGCACGGGATCTGGATTAAT
GCGGTAGCGTTAGTCTATGTGATCTTCGCGCTGTTTTGGTCTTTCTGGCC
AACTGAGATACCCGTGACCCTGAACAATTTCAATTGGAGCGTGGTGCTCT
TCGTGGGGGTGTTTGTTATTAGTTTGGCGATGTATATTGTTCAGGGGAGG
AGGGTGTATAAGGGTCCTGTGGTGGATGTAAAAAGCAGTTGAATGTCGTC
CGCAACTGGGGAAGCGGGCAGCATCCAAAAGGGCGACCGGGTGGTGACGA
CGGGCTGTCATCCGTTGGAAGTCGAAGCCGGCGAGGGAAATGGCGGGGAA
ACCGGCACGCGATATGACCACAGCGACATGAACCGCATGGGCAAAGCGCA
GGAGTTCAAGAGAAATCTCCGGCCTCTCGCTGCCTTAAGTTTCGCATCAG
TCTTGCAGGCGACCTGGGAGTTCATTTTAATATCCAACTATGAAGGTCTT
GAAGACGGTGGAATGGCTGGCCTGGTGTGGACATACGTGTGGACCTTTGT
CGGATTCGGCTTCATCATCGTCTCCTTATCGGAGATGGCATCCATGGCTC
CAACATCAGGAGGACAGTACCACTGGGTGTCCGAATTCGCCTCTCCCCGA
TACCAAAAGTTTCTCAGCTACATTACCGGATGGATGTCCGTTCTCGCATG
GCAAGCTGGCGCCGCATCAGGGTCCTTCCTGACCGGCACAATCATCCAAG
GGCTCATCAGCGTGCGCAACCCCGATTACGACCCCAAGCGATGGCAAGGA
ACGCTCTTTGTTTTCGCCATGATCCTGATCATCTACTTCTTCAATGTCTA
CGCTGCCAGCTGGATGCCACGGATACAGAATGCCCTGCTAGCCCTGCACA
CCATCTGCTGGGTAGTCGTGATTGTCGTCCTCTGGGCCATGGCCCCACGC
CAGTCCGCAAAGGCTGTATTCACCGAATTCAGCCTCTACGGCGGCTGGAA
CAACGTCGGGTTAGCATTAATGATCGGGCAAATATCCGCCATCTACGGAT
CCCTTAGCTCAGACGCCACGGCACACATGTCAGAAGAGGTCCGCGACGCC
GGCCGATACGTCCCCATGGCCATCTGCGGCGGCTACTTCAGCAACGGCAT
CCTAGCCCTCGTACTCATCATCACCCTCATGTTCGCCATGCCCTCCGTAA
AAGATGCCTTAGATGACCCAACCGGATTCCCCTTCATCTACGTCTTCAAA
CAAGCCGTCTCAACCGCCGGCGTCAACGGCCTCACCGCTATAATCCTCAT
CCCAGTCATCTTCAGCAACATCCTCTTCAACGCCTCCACAGCCCGCCAGA
CCTACGCGTTTGCGCGCGACAGGGGCCTACCCTTCTCAAACTGGATCTCA
AAAGTCAACCAGCATTACAAACTGCCCGTGAACGCCATCGCCCTATCATG
CATCATCAGTGGCCTTCTCTCCCTTATTAACATTGGCTCCGACACCGCCT
TCAACGCCATCATCTCCCTAAACGTAGCAGCGCTCATGTGGACCTACGCT
ATCTCCATCAGCTGCGTCATGTATCGCAAAATCTCCTGTCCGGACACATT
ACCCCCGCGACGGTGGAGTCTAGGGAAGCACGGGATCTGGATTAATGCGG
TAGCGTTAGTCTATGTGATCTTCGCGCTGTTTTGGTCTTTCTGGCCAACT
GAGATACCCGTGACCCTGAACAATTTCAATTGGAGCGTGGTGCTCTTCGT
GGGGGTGTTTGTTATTAGTTTGGCGATGTATATTGTTCAGGGGAGGAGGG
TGTATAAGGGTCCTGTGGTGGATGTAAAAAGCAGTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016020 | membrane |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001768-T1.utr3p1 | KJC3_001768-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_2.5 |
| Note | SMCOG1038:phenylalanine-specific permease |
| DBxref | InterPro:IPR002293 |
| DBxref | PFAM:PF13520 |
| DBxref | PFAM:PF00324 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:627893..630353 + |
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