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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:678635..680791- Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001786-T1 ID=KJC3_001786-T1|Name=KJC3_001786-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2157bp|location=Sequence derived from alignment at ch2:678635..680791- (Aspergillus niger KJC3)
ATGCCAGCCACCTCGAGAAGAGGGGGTGACTACTCTCGCTTCCGGGGTCG
ACGTCATGGACACGCCGAGACGCAGCCTCCAAGGGTCAGTGAGCACGGCG
AAACCAAGACAGAACTACAACCGAGTGCATTGCACGCCGAAACTGTGGGG
GTGGACAATGACACTCTTTTTCGTGGGGGTGTTCGAAACCCCTTAGAAGC
TCTTCAAATCCTCGCTCAGACGGCCGCCACTGCGGGGGATGACAGCATAC
CTTCGCCTGAGAGGCCTTCTCAAAGATCGGATGGCACAGGGCGTGCAGTG
GGGAAGTCTGTGCATCATGATTCACGAGAGCAACCCAAGGGATCAATAAT
GGCCACAGAGATCATCAAGGAGGGTATCATCGACGAACTGGACCTCGAAC
CCCTGGTACAATAGTATGTCCCGCTACCATGGCCGATTGTGCCTGCACTA
ACCGATACAATACAACAAGCTATACCATAAACTACCATCATTACTTTCCT
ATCGTGTCCAGCAATCTATTATACACAAAAGACCGCAAGCACCTATGGGC
TACAGAGACGTTCCTCCTCGCCTCCGTCCTTACAATAGCCACTCAGAACA
GGCCGGATCAGAAGCACCTTCACATCCGAATCAGAGGGTATATCGATAAG
CTAATACTTCGTGTCACTCTTGGCGCTAGAAGTGTGCGGCAAGTTGGGAC
CGTAGAAGGCTTACTGCTTCTAGCCGAGTGGATGCCACATCTAATGCTCT
CCCAGGATCAGCCCTACAGTAACAACTTTGGACAAAACAGCGCATACGAC
GAGGACTGTGTAGCCTGGAACCTGATAGGTCTTGCAGTCAGACAGGCATA
TTTGTTACATCTGGAAAAGCAATCCTTCCCCTGGGAGGTGGAGTCGGAGC
CATGCAGTATGCGCTGCCGGCGACGACTAGCATGGATATGTAGGTGATTC
AGACCTCAATTTAGGATAATGCCTCCTAACCGGCTATCGCCAGTTACCTA
TCTGGCCGACCGGCACATATCAATCCAAATGGGCCAAGCATTCTGGTCCC
GCGGACCAAGTCTATCCACCAGATTCAGCACCCAAGATTACCCATCACTA
CAACCGGCCATTACTGGCGGAACAGACTACGCCTCCTTCATACAGGCGCA
AGTAGAGCTAACAACCATCTTCGGGAATATCCACGACATCCTCTACGCAT
TAAAGTCGCGCACACTTCAGCTAATGCTGGTTGGAGACTACTCCAAATAT
CTCGACGATTCCGCCAAAGCAATGGAGATGTGGAAGGGAACCTGGTCAAA
CGTCGACATTCCCTCCACTCTGTGTTGTCTCCTCACACTACAGTACCAGT
ATCTACAACTCTACGTGAACGCCTTCGCCTTCCAAGCAGTCCTATATCGC
TCTTCTAAGACCTCCACCAACACAAGCCAGGAAGACAGCACATCCTTATT
CCCAGATAGTGTCATGGCCAGCCCCGACGCTCGCCACATCTACGCAGCCA
TCAACGCAGCAAGAAGTTTACTTCAAACGTTCGTGGAAGAGATAACTCCA
TCCGACATTGTGAAATTTCTTCCTGTTCGCTATTACCTGTAAGGATCCTA
TGTACCCATGCATAAACAAGCCACTAACACACCCAAGCTACGAAATCTAC
GCCTCCGTATTCCTCTTCAAAGCCTACTCCGTCGGAGCCATCTCGCCCGA
AGAATCTCACGCCTGCTTCACCCTAACCCTGCAATTCATCTCTATGCTCA
AAGGCGCCGCTACAAGCCAAACGCATATTGCTCATCGCTACGCTAAATTA
CTAGGTCATCTATGGTGTCATGGCAAGGTTACTCCTGAGTCGCATCAGGG
AAGTGCTATCCAGGAGAGCGAATTTACCAGTCTGCAACAGTACACGGCTG
ATGCGCCTGTAGATTCTGGGGATTTTCTTCAACCAGTCAATGTGGATACT
GATTTCATGGATGCGTTTTCGGGTTCTCTGCCGCTAGATTTGGACCGCTC
TTGGGATTCTGGATTTTACGATGAGACGCTGTTCTCTAGTTTGCCTTTTT
TTCGTGGATTTCGGGAGCTAGAGGGGGGTTATGTTCCGTGAGTGGGAATC
TTCCTGTTTGCGCTGTACTAGTTCTAGGATTAGGGGAAGTTATATGTCTT
TGATGGG back to topCoding sequence (CDS) from alignment at ch2:678635..680791- >KJC3_001786-T1 ID=KJC3_001786-T1|Name=KJC3_001786-T1|organism=Aspergillus niger KJC3|type=CDS|length=7728bp|location=Sequence derived from alignment at ch2:678635..680791- (Aspergillus niger KJC3)
CTACGAAATCTACGCCTCCGTATTCCTCTTCAAAGCCTACTCCGTCGGAG
CCATCTCGCCCGAAGAATCTCACGCCTGCTTCACCCTAACCCTGCAATTC
ATCTCTATGCTCAAAGGCGCCGCTACAAGCCAAACGCATATTGCTCATCG
CTACGCTAAATTACTAGGTCATCTATGGTGTCATGGCAAGGTTACTCCTG
AGTCGCATCAGGGAAGTGCTATCCAGGAGAGCGAATTTACCAGTCTGCAA
CAGTACACGGCTGATGCGCCTGTAGATTCTGGGGATTTTCTTCAACCAGT
CAATGTGGATACTGATTTCATGGATGCGTTTTCGGGTTCTCTGCCGCTAG
ATTTGGACCGCTCTTGGGATTCTGGATTTTACGATGAGACGCTGTTCTCT
AGTTTGCCTTTTTTTCGTGGATTTCGGGAGCTAGAGGGGGGTTATGTTCC
GTGATTACCTATCTGGCCGACCGGCACATATCAATCCAAATGGGCCAAGC
ATTCTGGTCCCGCGGACCAAGTCTATCCACCAGATTCAGCACCCAAGATT
ACCCATCACTACAACCGGCCATTACTGGCGGAACAGACTACGCCTCCTTC
ATACAGGCGCAAGTAGAGCTAACAACCATCTTCGGGAATATCCACGACAT
CCTCTACGCATTAAAGTCGCGCACACTTCAGCTAATGCTGGTTGGAGACT
ACTCCAAATATCTCGACGATTCCGCCAAAGCAATGGAGATGTGGAAGGGA
ACCTGGTCAAACGTCGACATTCCCTCCACTCTGTGTTGTCTCCTCACACT
ACAGTACCAGTATCTACAACTCTACGTGAACGCCTTCGCCTTCCAAGCAG
TCCTATATCGCTCTTCTAAGACCTCCACCAACACAAGCCAGGAAGACAGC
ACATCCTTATTCCCAGATAGTGTCATGGCCAGCCCCGACGCTCGCCACAT
CTACGCAGCCATCAACGCAGCAAGAAGTTTACTTCAAACGTTCGTGGAAG
AGATAACTCCATCCGACATTGTGAAATTTCTTCCTGTTCGCTATTACCTC
TATACCATAAACTACCATCATTACTTTCCTATCGTGTCCAGCAATCTATT
ATACACAAAAGACCGCAAGCACCTATGGGCTACAGAGACGTTCCTCCTCG
CCTCCGTCCTTACAATAGCCACTCAGAACAGGCCGGATCAGAAGCACCTT
CACATCCGAATCAGAGGGTATATCGATAAGCTAATACTTCGTGTCACTCT
TGGCGCTAGAAGTGTGCGGCAAGTTGGGACCGTAGAAGGCTTACTGCTTC
TAGCCGAGTGGATGCCACATCTAATGCTCTCCCAGGATCAGCCCTACAGT
AACAACTTTGGACAAAACAGCGCATACGACGAGGACTGTGTAGCCTGGAA
CCTGATAGGTCTTGCAGTCAGACAGGCATATTTGTTACATCTGGAAAAGC
AATCCTTCCCCTGGGAGGTGGAGTCGGAGCCATGCAGTATGCGCTGCCGG
CGACGACTAGCATGGATATATGCCAGCCACCTCGAGAAGAGGGGGTGACT
ACTCTCGCTTCCGGGGTCGACGTCATGGACACGCCGAGACGCAGCCTCCA
AGGGTCAGTGAGCACGGCGAAACCAAGACAGAACTACAACCGAGTGCATT
GCACGCCGAAACTGTGGGGGTGGACAATGACACTCTTTTTCGTGGGGGTG
TTCGAAACCCCTTAGAAGCTCTTCAAATCCTCGCTCAGACGGCCGCCACT
GCGGGGGATGACAGCATACCTTCGCCTGAGAGGCCTTCTCAAAGATCGGA
TGGCACAGGGCGTGCAGTGGGGAAGTCTGTGCATCATGATTCACGAGAGC
AACCCAAGGGATCAATAATGGCCACAGAGATCATCAAGGAGGGTATCATC
GACGAACTGGACCTCGAACCCCTGGTACAATACTACGAAATCTACGCCTC
CGTATTCCTCTTCAAAGCCTACTCCGTCGGAGCCATCTCGCCCGAAGAAT
CTCACGCCTGCTTCACCCTAACCCTGCAATTCATCTCTATGCTCAAAGGC
GCCGCTACAAGCCAAACGCATATTGCTCATCGCTACGCTAAATTACTAGG
TCATCTATGGTGTCATGGCAAGGTTACTCCTGAGTCGCATCAGGGAAGTG
CTATCCAGGAGAGCGAATTTACCAGTCTGCAACAGTACACGGCTGATGCG
CCTGTAGATTCTGGGGATTTTCTTCAACCAGTCAATGTGGATACTGATTT
CATGGATGCGTTTTCGGGTTCTCTGCCGCTAGATTTGGACCGCTCTTGGG
ATTCTGGATTTTACGATGAGACGCTGTTCTCTAGTTTGCCTTTTTTTCGT
GGATTTCGGGAGCTAGAGGGGGGTTATGTTCCGTGATTACCTATCTGGCC
GACCGGCACATATCAATCCAAATGGGCCAAGCATTCTGGTCCCGCGGACC
AAGTCTATCCACCAGATTCAGCACCCAAGATTACCCATCACTACAACCGG
CCATTACTGGCGGAACAGACTACGCCTCCTTCATACAGGCGCAAGTAGAG
CTAACAACCATCTTCGGGAATATCCACGACATCCTCTACGCATTAAAGTC
GCGCACACTTCAGCTAATGCTGGTTGGAGACTACTCCAAATATCTCGACG
ATTCCGCCAAAGCAATGGAGATGTGGAAGGGAACCTGGTCAAACGTCGAC
ATTCCCTCCACTCTGTGTTGTCTCCTCACACTACAGTACCAGTATCTACA
ACTCTACGTGAACGCCTTCGCCTTCCAAGCAGTCCTATATCGCTCTTCTA
AGACCTCCACCAACACAAGCCAGGAAGACAGCACATCCTTATTCCCAGAT
AGTGTCATGGCCAGCCCCGACGCTCGCCACATCTACGCAGCCATCAACGC
AGCAAGAAGTTTACTTCAAACGTTCGTGGAAGAGATAACTCCATCCGACA
TTGTGAAATTTCTTCCTGTTCGCTATTACCTCTATACCATAAACTACCAT
CATTACTTTCCTATCGTGTCCAGCAATCTATTATACACAAAAGACCGCAA
GCACCTATGGGCTACAGAGACGTTCCTCCTCGCCTCCGTCCTTACAATAG
CCACTCAGAACAGGCCGGATCAGAAGCACCTTCACATCCGAATCAGAGGG
TATATCGATAAGCTAATACTTCGTGTCACTCTTGGCGCTAGAAGTGTGCG
GCAAGTTGGGACCGTAGAAGGCTTACTGCTTCTAGCCGAGTGGATGCCAC
ATCTAATGCTCTCCCAGGATCAGCCCTACAGTAACAACTTTGGACAAAAC
AGCGCATACGACGAGGACTGTGTAGCCTGGAACCTGATAGGTCTTGCAGT
CAGACAGGCATATTTGTTACATCTGGAAAAGCAATCCTTCCCCTGGGAGG
TGGAGTCGGAGCCATGCAGTATGCGCTGCCGGCGACGACTAGCATGGATA
TATGCCAGCCACCTCGAGAAGAGGGGGTGACTACTCTCGCTTCCGGGGTC
GACGTCATGGACACGCCGAGACGCAGCCTCCAAGGGTCAGTGAGCACGGC
GAAACCAAGACAGAACTACAACCGAGTGCATTGCACGCCGAAACTGTGGG
GGTGGACAATGACACTCTTTTTCGTGGGGGTGTTCGAAACCCCTTAGAAG
CTCTTCAAATCCTCGCTCAGACGGCCGCCACTGCGGGGGATGACAGCATA
CCTTCGCCTGAGAGGCCTTCTCAAAGATCGGATGGCACAGGGCGTGCAGT
GGGGAAGTCTGTGCATCATGATTCACGAGAGCAACCCAAGGGATCAATAA
TGGCCACAGAGATCATCAAGGAGGGTATCATCGACGAACTGGACCTCGAA
CCCCTGGTACAATACTACGAAATCTACGCCTCCGTATTCCTCTTCAAAGC
CTACTCCGTCGGAGCCATCTCGCCCGAAGAATCTCACGCCTGCTTCACCC
TAACCCTGCAATTCATCTCTATGCTCAAAGGCGCCGCTACAAGCCAAACG
CATATTGCTCATCGCTACGCTAAATTACTAGGTCATCTATGGTGTCATGG
CAAGGTTACTCCTGAGTCGCATCAGGGAAGTGCTATCCAGGAGAGCGAAT
TTACCAGTCTGCAACAGTACACGGCTGATGCGCCTGTAGATTCTGGGGAT
TTTCTTCAACCAGTCAATGTGGATACTGATTTCATGGATGCGTTTTCGGG
TTCTCTGCCGCTAGATTTGGACCGCTCTTGGGATTCTGGATTTTACGATG
AGACGCTGTTCTCTAGTTTGCCTTTTTTTCGTGGATTTCGGGAGCTAGAG
GGGGGTTATGTTCCGTGATTACCTATCTGGCCGACCGGCACATATCAATC
CAAATGGGCCAAGCATTCTGGTCCCGCGGACCAAGTCTATCCACCAGATT
CAGCACCCAAGATTACCCATCACTACAACCGGCCATTACTGGCGGAACAG
ACTACGCCTCCTTCATACAGGCGCAAGTAGAGCTAACAACCATCTTCGGG
AATATCCACGACATCCTCTACGCATTAAAGTCGCGCACACTTCAGCTAAT
GCTGGTTGGAGACTACTCCAAATATCTCGACGATTCCGCCAAAGCAATGG
AGATGTGGAAGGGAACCTGGTCAAACGTCGACATTCCCTCCACTCTGTGT
TGTCTCCTCACACTACAGTACCAGTATCTACAACTCTACGTGAACGCCTT
CGCCTTCCAAGCAGTCCTATATCGCTCTTCTAAGACCTCCACCAACACAA
GCCAGGAAGACAGCACATCCTTATTCCCAGATAGTGTCATGGCCAGCCCC
GACGCTCGCCACATCTACGCAGCCATCAACGCAGCAAGAAGTTTACTTCA
AACGTTCGTGGAAGAGATAACTCCATCCGACATTGTGAAATTTCTTCCTG
TTCGCTATTACCTCTATACCATAAACTACCATCATTACTTTCCTATCGTG
TCCAGCAATCTATTATACACAAAAGACCGCAAGCACCTATGGGCTACAGA
GACGTTCCTCCTCGCCTCCGTCCTTACAATAGCCACTCAGAACAGGCCGG
ATCAGAAGCACCTTCACATCCGAATCAGAGGGTATATCGATAAGCTAATA
CTTCGTGTCACTCTTGGCGCTAGAAGTGTGCGGCAAGTTGGGACCGTAGA
AGGCTTACTGCTTCTAGCCGAGTGGATGCCACATCTAATGCTCTCCCAGG
ATCAGCCCTACAGTAACAACTTTGGACAAAACAGCGCATACGACGAGGAC
TGTGTAGCCTGGAACCTGATAGGTCTTGCAGTCAGACAGGCATATTTGTT
ACATCTGGAAAAGCAATCCTTCCCCTGGGAGGTGGAGTCGGAGCCATGCA
GTATGCGCTGCCGGCGACGACTAGCATGGATATATGCCAGCCACCTCGAG
AAGAGGGGGTGACTACTCTCGCTTCCGGGGTCGACGTCATGGACACGCCG
AGACGCAGCCTCCAAGGGTCAGTGAGCACGGCGAAACCAAGACAGAACTA
CAACCGAGTGCATTGCACGCCGAAACTGTGGGGGTGGACAATGACACTCT
TTTTCGTGGGGGTGTTCGAAACCCCTTAGAAGCTCTTCAAATCCTCGCTC
AGACGGCCGCCACTGCGGGGGATGACAGCATACCTTCGCCTGAGAGGCCT
TCTCAAAGATCGGATGGCACAGGGCGTGCAGTGGGGAAGTCTGTGCATCA
TGATTCACGAGAGCAACCCAAGGGATCAATAATGGCCACAGAGATCATCA
AGGAGGGTATCATCGACGAACTGGACCTCGAACCCCTGGTACAATACTAC
GAAATCTACGCCTCCGTATTCCTCTTCAAAGCCTACTCCGTCGGAGCCAT
CTCGCCCGAAGAATCTCACGCCTGCTTCACCCTAACCCTGCAATTCATCT
CTATGCTCAAAGGCGCCGCTACAAGCCAAACGCATATTGCTCATCGCTAC
GCTAAATTACTAGGTCATCTATGGTGTCATGGCAAGGTTACTCCTGAGTC
GCATCAGGGAAGTGCTATCCAGGAGAGCGAATTTACCAGTCTGCAACAGT
ACACGGCTGATGCGCCTGTAGATTCTGGGGATTTTCTTCAACCAGTCAAT
GTGGATACTGATTTCATGGATGCGTTTTCGGGTTCTCTGCCGCTAGATTT
GGACCGCTCTTGGGATTCTGGATTTTACGATGAGACGCTGTTCTCTAGTT
TGCCTTTTTTTCGTGGATTTCGGGAGCTAGAGGGGGGTTATGTTCCGTGA
TTACCTATCTGGCCGACCGGCACATATCAATCCAAATGGGCCAAGCATTC
TGGTCCCGCGGACCAAGTCTATCCACCAGATTCAGCACCCAAGATTACCC
ATCACTACAACCGGCCATTACTGGCGGAACAGACTACGCCTCCTTCATAC
AGGCGCAAGTAGAGCTAACAACCATCTTCGGGAATATCCACGACATCCTC
TACGCATTAAAGTCGCGCACACTTCAGCTAATGCTGGTTGGAGACTACTC
CAAATATCTCGACGATTCCGCCAAAGCAATGGAGATGTGGAAGGGAACCT
GGTCAAACGTCGACATTCCCTCCACTCTGTGTTGTCTCCTCACACTACAG
TACCAGTATCTACAACTCTACGTGAACGCCTTCGCCTTCCAAGCAGTCCT
ATATCGCTCTTCTAAGACCTCCACCAACACAAGCCAGGAAGACAGCACAT
CCTTATTCCCAGATAGTGTCATGGCCAGCCCCGACGCTCGCCACATCTAC
GCAGCCATCAACGCAGCAAGAAGTTTACTTCAAACGTTCGTGGAAGAGAT
AACTCCATCCGACATTGTGAAATTTCTTCCTGTTCGCTATTACCTCTATA
CCATAAACTACCATCATTACTTTCCTATCGTGTCCAGCAATCTATTATAC
ACAAAAGACCGCAAGCACCTATGGGCTACAGAGACGTTCCTCCTCGCCTC
CGTCCTTACAATAGCCACTCAGAACAGGCCGGATCAGAAGCACCTTCACA
TCCGAATCAGAGGGTATATCGATAAGCTAATACTTCGTGTCACTCTTGGC
GCTAGAAGTGTGCGGCAAGTTGGGACCGTAGAAGGCTTACTGCTTCTAGC
CGAGTGGATGCCACATCTAATGCTCTCCCAGGATCAGCCCTACAGTAACA
ACTTTGGACAAAACAGCGCATACGACGAGGACTGTGTAGCCTGGAACCTG
ATAGGTCTTGCAGTCAGACAGGCATATTTGTTACATCTGGAAAAGCAATC
CTTCCCCTGGGAGGTGGAGTCGGAGCCATGCAGTATGCGCTGCCGGCGAC
GACTAGCATGGATATATGCCAGCCACCTCGAGAAGAGGGGGTGACTACTC
TCGCTTCCGGGGTCGACGTCATGGACACGCCGAGACGCAGCCTCCAAGGG
TCAGTGAGCACGGCGAAACCAAGACAGAACTACAACCGAGTGCATTGCAC
GCCGAAACTGTGGGGGTGGACAATGACACTCTTTTTCGTGGGGGTGTTCG
AAACCCCTTAGAAGCTCTTCAAATCCTCGCTCAGACGGCCGCCACTGCGG
GGGATGACAGCATACCTTCGCCTGAGAGGCCTTCTCAAAGATCGGATGGC
ACAGGGCGTGCAGTGGGGAAGTCTGTGCATCATGATTCACGAGAGCAACC
CAAGGGATCAATAATGGCCACAGAGATCATCAAGGAGGGTATCATCGACG
AACTGGACCTCGAACCCCTGGTACAATA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
| GO:0008270 | zinc ion binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006351 | transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001786-T1.utr3p1 | KJC3_001786-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR007219 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:678635..680791 - |
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