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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:688316..690170- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001791-T1 ID=KJC3_001791-T1|Name=KJC3_001791-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1855bp|location=Sequence derived from alignment at ch2:688316..690170- (Aspergillus niger KJC3)
ATGAAGCCATCCACTGACGGGGACGTTACCAAACTTCTTCAGAAGCTGCC
TTCACTTATCTCAGATGCGCATCACTCGGAGATTTGGGGCATACAACTCG
ATGGTGACGACGATAAACGCAAGGAGATAGTTATTGAGAAGGTAAGGTAT
GCTTCTGGAAATACAATCTCAGCCGCTCACAAATCAACAGTTCCTCGAAC
AGCATTCAATCATACCCTCTATCAGCCTTGCCAGGGCGAGTGCCTCCCTC
CAGAGTGCCCTCAAATGGAGACGCATTGTTCAGCCTCGATCAGCACTGAC
GGGGTCAAGGGAAATTCTCACAAAATCGGGGCTCCAGCACATAACGCGTA
CGGAGGACAGACTGATCATGTGGGTAGTCATCGATGAGAAGACCATTAGA
GATCTTCCAGCAACATACGAAGGGTTCATGCAGAAATACGGGCTTGCAGA
TCTGGGTACTGCGGCCCTCGAGAATGTTGCATCTGCACTTATAGACGCAA
ATTGTGAGCTTTATGATGAAAGCAGCCTGCAAGCTGCCTGTGTCGTGCAA
TTCAAACTTTACTCTGTACCACCTGGCCGCAGGATAGGTATTTCATTGCG
TGATAGAGTTCGTGACATGCTTTCAGGCGTCGTGACCGAGTTGCAAAAGT
ATTATCCTGGCTTTCTTGACCGTGCTTATCTTATACAGCCTTTTGACGAC
TATCTCGACTCTCTAGAAATTTCCGAAAGCCTGCTCAAAAAGACCACAAT
ACTGCAAAGTGCTGAAGACCTGGTAAACTACCTGGGGCCGGACGTACCAC
CGGAATTTGGGGGAATGGGTATGCCACTCTGCAACCGTGATATCATGAGG
AACATATGTGGTGAACATGAAGAACCGCCCACCTCACGGGATCCCCTTAA
GATCAAGCGGACAACCGACAAGACCAAAGAAGACACAGTCTTTGGTGTAC
AGGAAAATGACAGCGTGTCTAATGCGGAGAACCCCGAACCAGAATTGACT
TGGTCTGAAACTATTGGACCGCCAACAATAATCTTGGACCCTTCAGATCT
GAAGAATGCACACGAGCTTTGTCCCGATAAGGGGGGCGCGTGTCTAGCCT
GGGCTGATTCAGAAACGATAGTCAAATATGGACACGGCGTTCGACTTGCG
GAGGCTGAAGCAATGCATTTGGTATCCACTCGAACCAACATTCCAATCCC
CAGATTGCTCAGTGCTTATGTTCTCCATGGAGTATGCTACATAGTCATGG
AATATGTGGAAGCGGAGTCTTTCAACAAATACTGGGATCGTGTCTCAGAG
CCAGAACAGCAAAACGTACTTCGCCAGCTTCGCAACTACGTCTTACAAAT
GCGGTCCATAAAAGGCGAGTTCATTGGGGGCGTTGACTCATCTCCATGCC
GAGACGGTATCTTCGACGCAGTCTGGGATAACTACGGCGCTGGCTCATAT
GGTCCCTACGCTTCCGAGGCTCTTTTCACAGAGGGGATAGTCCAAGTTTT
GCGTGATCGGATTCCGCCCAATTTACCCGAGGAGTCTTCAGATTTGGATT
CTGTCTTCTTCACCAATGAATATGTGCTCTACCAGACAGTCAGAGAGCTT
AAGAAGATGAATCATTCTATTGTTTTCACACATGGTGACCTTCATTGTGG
CAACATGTTGGTCCGTTCTGATGGGACTGTTGTGATCGTGGACTGGGGAC
AGGCAGGATACTGGCCTGATTATTGGGAATTTTATCGTGCCATGTTCCAA
GTGCCTTGGCGACCTTCCTGGGACAGGATGATAGAGAAGTTTATTCCGCC
ATCCTATGTAGAGTATGAGATCATTAAGAATGTGTTCTCATACGTATTCA
ACTAG back to topCoding sequence (CDS) from alignment at ch2:688316..690170- >KJC3_001791-T1 ID=KJC3_001791-T1|Name=KJC3_001791-T1|organism=Aspergillus niger KJC3|type=CDS|length=3612bp|location=Sequence derived from alignment at ch2:688316..690170- (Aspergillus niger KJC3)
TTCCTCGAACAGCATTCAATCATACCCTCTATCAGCCTTGCCAGGGCGAG
TGCCTCCCTCCAGAGTGCCCTCAAATGGAGACGCATTGTTCAGCCTCGAT
CAGCACTGACGGGGTCAAGGGAAATTCTCACAAAATCGGGGCTCCAGCAC
ATAACGCGTACGGAGGACAGACTGATCATGTGGGTAGTCATCGATGAGAA
GACCATTAGAGATCTTCCAGCAACATACGAAGGGTTCATGCAGAAATACG
GGCTTGCAGATCTGGGTACTGCGGCCCTCGAGAATGTTGCATCTGCACTT
ATAGACGCAAATTGTGAGCTTTATGATGAAAGCAGCCTGCAAGCTGCCTG
TGTCGTGCAATTCAAACTTTACTCTGTACCACCTGGCCGCAGGATAGGTA
TTTCATTGCGTGATAGAGTTCGTGACATGCTTTCAGGCGTCGTGACCGAG
TTGCAAAAGTATTATCCTGGCTTTCTTGACCGTGCTTATCTTATACAGCC
TTTTGACGACTATCTCGACTCTCTAGAAATTTCCGAAAGCCTGCTCAAAA
AGACCACAATACTGCAAAGTGCTGAAGACCTGGTAAACTACCTGGGGCCG
GACGTACCACCGGAATTTGGGGGAATGGGTATGCCACTCTGCAACCGTGA
TATCATGAGGAACATATGTGGTGAACATGAAGAACCGCCCACCTCACGGG
ATCCCCTTAAGATCAAGCGGACAACCGACAAGACCAAAGAAGACACAGTC
TTTGGTGTACAGGAAAATGACAGCGTGTCTAATGCGGAGAACCCCGAACC
AGAATTGACTTGGTCTGAAACTATTGGACCGCCAACAATAATCTTGGACC
CTTCAGATCTGAAGAATGCACACGAGCTTTGTCCCGATAAGGGGGGCGCG
TGTCTAGCCTGGGCTGATTCAGAAACGATAGTCAAATATGGACACGGCGT
TCGACTTGCGGAGGCTGAAGCAATGCATTTGGTATCCACTCGAACCAACA
TTCCAATCCCCAGATTGCTCAGTGCTTATGTTCTCCATGGAGTATGCTAC
ATAGTCATGGAATATGTGGAAGCGGAGTCTTTCAACAAATACTGGGATCG
TGTCTCAGAGCCAGAACAGCAAAACGTACTTCGCCAGCTTCGCAACTACG
TCTTACAAATGCGGTCCATAAAAGGCGAGTTCATTGGGGGCGTTGACTCA
TCTCCATGCCGAGACGGTATCTTCGACGCAGTCTGGGATAACTACGGCGC
TGGCTCATATGGTCCCTACGCTTCCGAGGCTCTTTTCACAGAGGGGATAG
TCCAAGTTTTGCGTGATCGGATTCCGCCCAATTTACCCGAGGAGTCTTCA
GATTTGGATTCTGTCTTCTTCACCAATGAATATGTGCTCTACCAGACAGT
CAGAGAGCTTAAGAAGATGAATCATTCTATTGTTTTCACACATGGTGACC
TTCATTGTGGCAACATGTTGGTCCGTTCTGATGGGACTGTTGTGATCGTG
GACTGGGGACAGGCAGGATACTGGCCTGATTATTGGGAATTTTATCGTGC
CATGTTCCAAGTGCCTTGGCGACCTTCCTGGGACAGGATGATAGAGAAGT
TTATTCCGCCATCCTATGTAGAGTATGAGATCATTAAGAATGTGTTCTCA
TACGTATTCAACTAGATGAAGCCATCCACTGACGGGGACGTTACCAAACT
TCTTCAGAAGCTGCCTTCACTTATCTCAGATGCGCATCACTCGGAGATTT
GGGGCATACAACTCGATGGTGACGACGATAAACGCAAGGAGATAGTTATT
GAGAAGTTCCTCGAACAGCATTCAATCATACCCTCTATCAGCCTTGCCAG
GGCGAGTGCCTCCCTCCAGAGTGCCCTCAAATGGAGACGCATTGTTCAGC
CTCGATCAGCACTGACGGGGTCAAGGGAAATTCTCACAAAATCGGGGCTC
CAGCACATAACGCGTACGGAGGACAGACTGATCATGTGGGTAGTCATCGA
TGAGAAGACCATTAGAGATCTTCCAGCAACATACGAAGGGTTCATGCAGA
AATACGGGCTTGCAGATCTGGGTACTGCGGCCCTCGAGAATGTTGCATCT
GCACTTATAGACGCAAATTGTGAGCTTTATGATGAAAGCAGCCTGCAAGC
TGCCTGTGTCGTGCAATTCAAACTTTACTCTGTACCACCTGGCCGCAGGA
TAGGTATTTCATTGCGTGATAGAGTTCGTGACATGCTTTCAGGCGTCGTG
ACCGAGTTGCAAAAGTATTATCCTGGCTTTCTTGACCGTGCTTATCTTAT
ACAGCCTTTTGACGACTATCTCGACTCTCTAGAAATTTCCGAAAGCCTGC
TCAAAAAGACCACAATACTGCAAAGTGCTGAAGACCTGGTAAACTACCTG
GGGCCGGACGTACCACCGGAATTTGGGGGAATGGGTATGCCACTCTGCAA
CCGTGATATCATGAGGAACATATGTGGTGAACATGAAGAACCGCCCACCT
CACGGGATCCCCTTAAGATCAAGCGGACAACCGACAAGACCAAAGAAGAC
ACAGTCTTTGGTGTACAGGAAAATGACAGCGTGTCTAATGCGGAGAACCC
CGAACCAGAATTGACTTGGTCTGAAACTATTGGACCGCCAACAATAATCT
TGGACCCTTCAGATCTGAAGAATGCACACGAGCTTTGTCCCGATAAGGGG
GGCGCGTGTCTAGCCTGGGCTGATTCAGAAACGATAGTCAAATATGGACA
CGGCGTTCGACTTGCGGAGGCTGAAGCAATGCATTTGGTATCCACTCGAA
CCAACATTCCAATCCCCAGATTGCTCAGTGCTTATGTTCTCCATGGAGTA
TGCTACATAGTCATGGAATATGTGGAAGCGGAGTCTTTCAACAAATACTG
GGATCGTGTCTCAGAGCCAGAACAGCAAAACGTACTTCGCCAGCTTCGCA
ACTACGTCTTACAAATGCGGTCCATAAAAGGCGAGTTCATTGGGGGCGTT
GACTCATCTCCATGCCGAGACGGTATCTTCGACGCAGTCTGGGATAACTA
CGGCGCTGGCTCATATGGTCCCTACGCTTCCGAGGCTCTTTTCACAGAGG
GGATAGTCCAAGTTTTGCGTGATCGGATTCCGCCCAATTTACCCGAGGAG
TCTTCAGATTTGGATTCTGTCTTCTTCACCAATGAATATGTGCTCTACCA
GACAGTCAGAGAGCTTAAGAAGATGAATCATTCTATTGTTTTCACACATG
GTGACCTTCATTGTGGCAACATGTTGGTCCGTTCTGATGGGACTGTTGTG
ATCGTGGACTGGGGACAGGCAGGATACTGGCCTGATTATTGGGAATTTTA
TCGTGCCATGTTCCAAGTGCCTTGGCGACCTTCCTGGGACAGGATGATAG
AGAAGTTTATTCCGCCATCCTATGTAGAGTATGAGATCATTAAGAATGTG
TTCTCATACGTATTCAACTAGATGAAGCCATCCACTGACGGGGACGTTAC
CAAACTTCTTCAGAAGCTGCCTTCACTTATCTCAGATGCGCATCACTCGG
AGATTTGGGGCATACAACTCGATGGTGACGACGATAAACGCAAGGAGATA
GTTATTGAGAAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011009 |
| DBxref | InterPro:IPR002575 |
| DBxref | PFAM:PF01636 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:688316..690170 - |
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