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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:872195..873554+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001851-T1 ID=KJC3_001851-T1|Name=KJC3_001851-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1360bp|location=Sequence derived from alignment at ch2:872195..873554+ (Aspergillus niger KJC3)
GTATGCTGCTTTTCAGCTTTGTAGGTTTTCTTTTCTTTCTATAATCTCAC
CTCCCATTATCCATCCCAAGCACTCGCTCAACCCCGCATTCTCGGGAAGA
TCACCAGCTCGACCCCTCACAAGCACACGAAACACGAACACAAACAAAGA
AAGAAAAGAGAAAACTACACCCACGACAATGCCAACCCCAATCATCGACT
CCCACATCCACCTCTTCCCAGCATCCCATCTCCCCACGCTGGCCTGGTAT
ACACCCTCCAGCCCACTAGGATCCCAGCACTCCGTCGACGAATACCGCCT
CGCAACCACCTCCATTCCCACATCCCCGGAACCAACAACAGACTCACATT
ACCTACGGGGCTTCATCTTCCTCGAAACCGACCGGATCTCCTCAATTGAA
GAATCAGATCCAACCCGTGGCTGGTCCCACGCCCTCGACGAAGTCTCCTT
CCTCACCCGGATCATTACCGGAGACCCCGTCCCCGGGGAAGGCCACAAAG
ATGTAGATCGCCACATCTGTCTAGGTATGGTGCCCTGGGCGCCTGTTCCC
GGAGGTCCTGCTGCGCTGGAGAAGTACATTTCTCTAGTGAGAGAAAGGAC
TCGCACGGAGGAAGTATTCAGAAAAGTCCGCGGAGTGCGGTACCTCGTTC
AGGATAAGCCGAGCGGAGTCATGTTGCAGCCCGAGTTCATTGATGGGTTG
AGGTGGCTAGGACGGCAGCAGTTGGCGTTTGATCTGGGGGTGGATGCTCG
TCAAGGTGGCATTTGGCAGTTGAGGGAGGCGGCGGAGATGATGAATACGG
TTTATCGGGGGGTTGGGGAGAAGAAGGATAGGGTTAGGATCGTTATTAGT
ATGTTCATCCACGACCTTCTGCTTCTATCTTTGAGTAGAGTTTATGGTTG
GTATTTGCTTGTTGCTAACGAGCCGTCTACAGATCACCTGTGCAAGCCAA
ACCTTCGTCTGCCGTACACATCGCCAGACTCGATAGCTACGCATCCTGAT
TTCCTGGAGTGGAGCTCCCTGATCACAGCCATGGCACAGCATCCGACAGC
GTATATGAAGCTTTCCGGTGGATTCTCGGAGCTTCCCCCGCTGACGGCGG
AATCGGAGCCGGATATTGCTGCCCTAGTCGACCAGGTCCAGCTGTGGACG
GACGTGGTCTTTGATGCATTTGGGCCGGAGAGAGTCATGTTTGGGTCTGA
CTGGCCGGTGTGTAATGTGGGTGGAGGCGGCAGTGCAGTCGCCTGGAGAC
GGTGGAGGAGTGTGGTGGAGGGCATCTTGGAGAAGAGGGGCTTGTCGCAG
GAGCAGAAGGAGGGTGTATGGGGAGGAGTTGCAGTCAAAGCATATGCGAT
TGAAATCTAG back to topCoding sequence (CDS) from alignment at ch2:872195..873554+ >KJC3_001851-T1 ID=KJC3_001851-T1|Name=KJC3_001851-T1|organism=Aspergillus niger KJC3|type=CDS|length=2196bp|location=Sequence derived from alignment at ch2:872195..873554+ (Aspergillus niger KJC3)
ATGCCAACCCCAATCATCGACTCCCACATCCACCTCTTCCCAGCATCCCA
TCTCCCCACGCTGGCCTGGTATACACCCTCCAGCCCACTAGGATCCCAGC
ACTCCGTCGACGAATACCGCCTCGCAACCACCTCCATTCCCACATCCCCG
GAACCAACAACAGACTCACATTACCTACGGGGCTTCATCTTCCTCGAAAC
CGACCGGATCTCCTCAATTGAAGAATCAGATCCAACCCGTGGCTGGTCCC
ACGCCCTCGACGAAGTCTCCTTCCTCACCCGGATCATTACCGGAGACCCC
GTCCCCGGGGAAGGCCACAAAGATGTAGATCGCCACATCTGTCTAGGTAT
GGTGCCCTGGGCGCCTGTTCCCGGAGGTCCTGCTGCGCTGGAGAAGTACA
TTTCTCTAGTGAGAGAAAGGACTCGCACGGAGGAAGTATTCAGAAAAGTC
CGCGGAGTGCGGTACCTCGTTCAGGATAAGCCGAGCGGAGTCATGTTGCA
GCCCGAGTTCATTGATGGGTTGAGGTGGCTAGGACGGCAGCAGTTGGCGT
TTGATCTGGGGGTGGATGCTCGTCAAGGTGGCATTTGGCAGTTGAGGGAG
GCGGCGGAGATGATGAATACGGTTTATCGGGGGGTTGGGGAGAAGAAGGA
TAGGGTTAGGATCGTTATTAATCACCTGTGCAAGCCAAACCTTCGTCTGC
CGTACACATCGCCAGACTCGATAGCTACGCATCCTGATTTCCTGGAGTGG
AGCTCCCTGATCACAGCCATGGCACAGCATCCGACAGCGTATATGAAGCT
TTCCGGTGGATTCTCGGAGCTTCCCCCGCTGACGGCGGAATCGGAGCCGG
ATATTGCTGCCCTAGTCGACCAGGTCCAGCTGTGGACGGACGTGGTCTTT
GATGCATTTGGGCCGGAGAGAGTCATGTTTGGGTCTGACTGGCCGGTGTG
TAATGTGGGTGGAGGCGGCAGTGCAGTCGCCTGGAGACGGTGGAGGAGTG
TGGTGGAGGGCATCTTGGAGAAGAGGGGCTTGTCGCAGGAGCAGAAGGAG
GGTGTATGGGGAGGAGTTGCAGTCAAAGCATATGCGATTGAAATCTAGAT
GCCAACCCCAATCATCGACTCCCACATCCACCTCTTCCCAGCATCCCATC
TCCCCACGCTGGCCTGGTATACACCCTCCAGCCCACTAGGATCCCAGCAC
TCCGTCGACGAATACCGCCTCGCAACCACCTCCATTCCCACATCCCCGGA
ACCAACAACAGACTCACATTACCTACGGGGCTTCATCTTCCTCGAAACCG
ACCGGATCTCCTCAATTGAAGAATCAGATCCAACCCGTGGCTGGTCCCAC
GCCCTCGACGAAGTCTCCTTCCTCACCCGGATCATTACCGGAGACCCCGT
CCCCGGGGAAGGCCACAAAGATGTAGATCGCCACATCTGTCTAGGTATGG
TGCCCTGGGCGCCTGTTCCCGGAGGTCCTGCTGCGCTGGAGAAGTACATT
TCTCTAGTGAGAGAAAGGACTCGCACGGAGGAAGTATTCAGAAAAGTCCG
CGGAGTGCGGTACCTCGTTCAGGATAAGCCGAGCGGAGTCATGTTGCAGC
CCGAGTTCATTGATGGGTTGAGGTGGCTAGGACGGCAGCAGTTGGCGTTT
GATCTGGGGGTGGATGCTCGTCAAGGTGGCATTTGGCAGTTGAGGGAGGC
GGCGGAGATGATGAATACGGTTTATCGGGGGGTTGGGGAGAAGAAGGATA
GGGTTAGGATCGTTATTAATCACCTGTGCAAGCCAAACCTTCGTCTGCCG
TACACATCGCCAGACTCGATAGCTACGCATCCTGATTTCCTGGAGTGGAG
CTCCCTGATCACAGCCATGGCACAGCATCCGACAGCGTATATGAAGCTTT
CCGGTGGATTCTCGGAGCTTCCCCCGCTGACGGCGGAATCGGAGCCGGAT
ATTGCTGCCCTAGTCGACCAGGTCCAGCTGTGGACGGACGTGGTCTTTGA
TGCATTTGGGCCGGAGAGAGTCATGTTTGGGTCTGACTGGCCGGTGTGTA
ATGTGGGTGGAGGCGGCAGTGCAGTCGCCTGGAGACGGTGGAGGAGTGTG
GTGGAGGGCATCTTGGAGAAGAGGGGCTTGTCGCAGGAGCAGAAGGAGGG
TGTATGGGGAGGAGTTGCAGTCAAAGCATATGCGATTGAAATCTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016787 | hydrolase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001851-T1.utr5p1 | KJC3_001851-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR032466 |
| DBxref | InterPro:IPR006680 |
| DBxref | PFAM:PF04909 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:872195..873554 + |
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