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KJC3_001853-T1, KJC3_001853-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001853-T1
Unique NameKJC3_001853-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:874977..876690-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001853-T1 ID=KJC3_001853-T1|Name=KJC3_001853-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1714bp|location=Sequence derived from alignment at ch2:874977..876690- (Aspergillus niger KJC3)
TGCTCGTATGCTTTCAAATATGCTCCAGTTTCCCCGGGAGAAGTTTATCT
CCCTCCCTCTCTCTCTCTCTTTTCTTTTGCTTCTCCTTATCTAGCTTTTG
TGATATTCTTCATACCCACTCCGCTAAACTACTGCCAACATGGGTTCTAC
CGGACAATTTCCCCGCATCAAAGAGATCCGCACCTTCATCATTGATGGTG
TGGGATCCGGAGGTGATTATCATAATGTATGCTCAGCAGCGCCCGGATAA
TGATGAGCAGATCGCTAAATTTCTCCATTTCAACAGGTCAAAGGAGGTCA
CTGGTTGATTGACAGTAACATCTCCACCCCCATGACTCGCTGGGCACAAT
ACCGTGGCTCTCGCACATCATGGGGTATTAACGTCCTGGGCTCTTTCTGC
GTCGAGATTGAAGCTACCGACGGGACTAAGGGATTTGCCACGGGATTCGG
TGGTCCCCCAGCTTGTTGGCTGGTCCATCAACACTTTGAGCGCTTCCTGC
TTGGTGCTGGTATGAGCTATCAATATATCAGTCTACTGAGAATGAGCCAG
GCTAATTTGTATCTCATCTTCTAGACCCCAGAGATACCAATGACCTGTTC
GAGAAGATGTACCGGGGATCGATGTTCTATGGCAGAAAAGGTCTCCCTGT
TGCCGTCATCTCAGTGATTGATTTGGCTATCTGGGACCTTCTGGGCAAGA
TTCGCAACGAACCCGTTTACAAGCTCATTGGCGGCGCTACCCGTTCGCGT
CTGGACTTCTACTGCACTGGACCCCAGCCCGCTTCGGCCAAGGCCATGGG
TTTCTCCGGAGCCAAGGTCGCTCTTCCCCATGGCCCTGACGAGGGTACGG
AAGGACTCTTGAAGAACGTCGACTACCTCCGCAAGCAGCGGGAATCAGTC
GGTCCCAACTTCCCTCTGCGGGTCGACTGCTACATGTCCCTGAACGTTCC
ATACACAATTGAGCTGGTCAAGCGTTGTGAGGCGGAAGGAATCAACATTG
ACTGGTGGGAAGAATGCTTGACCCCGGATGACTTCGACGGTCATGCGCTT
TTGAAGAGAGCCCACCCCACTGTCAAGTTCACCACCGGAGAGCACGAGTA
CTCACGGTACGGTTTCCGAAAGCTCGTGGAGGGCCGTAACTTGGACATTC
TGCAGCCGGATGTCATGTGGGTCGGTGGTATGACGGAGTTGCTCAAGGTC
TCCGCCCTTGCCAGTGCCTACGACCTCCCCGTTGTTCCTCACGCATCTGG
ACCTTACTCCTACCACTTTGTGGTTTCGCAACCCAATACACCCTTCCAGG
AATACCTCGCCAACTCTGCAGATGGACACACTGTTGAGCCCGTCTTCGGA
AACCTCTTCCTCAACGAGCCGATCCCTACTAAGGGATACCTGGATGTATC
GATCCTGGACAAGCCGGGCTTCGGCCTCGAGCTAAACCCTGCTGCGTCTC
TTATCCCAGCAGCTTCAATTCTCACTCCTGCACCCCAAAAGGCACTGGTT
GCTCCAACTGAGAACCAGCAGGAGTCTACTTGAGCAGTATTTCGACGAAA
ATCTTGACGGTTTTTCTAGAAGATGCTTGATGGCATATTTCCTATCTGTG
ACGAGATTAGCATTTTACTTACTACGCATGTACACATGACCATTTTTCTG
TTTCAGTTTTATTCAGAACAATAGATAGGGGGCAATGGAACAATCCTCGA
CATGACTTGGGAAC
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Coding sequence (CDS) from alignment at ch2:874977..876690-

>KJC3_001853-T1 ID=KJC3_001853-T1|Name=KJC3_001853-T1|organism=Aspergillus niger KJC3|type=CDS|length=3807bp|location=Sequence derived from alignment at ch2:874977..876690- (Aspergillus niger KJC3)
ACCCCAGAGATACCAATGACCTGTTCGAGAAGATGTACCGGGGATCGATG
TTCTATGGCAGAAAAGGTCTCCCTGTTGCCGTCATCTCAGTGATTGATTT
GGCTATCTGGGACCTTCTGGGCAAGATTCGCAACGAACCCGTTTACAAGC
TCATTGGCGGCGCTACCCGTTCGCGTCTGGACTTCTACTGCACTGGACCC
CAGCCCGCTTCGGCCAAGGCCATGGGTTTCTCCGGAGCCAAGGTCGCTCT
TCCCCATGGCCCTGACGAGGGTACGGAAGGACTCTTGAAGAACGTCGACT
ACCTCCGCAAGCAGCGGGAATCAGTCGGTCCCAACTTCCCTCTGCGGGTC
GACTGCTACATGTCCCTGAACGTTCCATACACAATTGAGCTGGTCAAGCG
TTGTGAGGCGGAAGGAATCAACATTGACTGGTGGGAAGAATGCTTGACCC
CGGATGACTTCGACGGTCATGCGCTTTTGAAGAGAGCCCACCCCACTGTC
AAGTTCACCACCGGAGAGCACGAGTACTCACGGTACGGTTTCCGAAAGCT
CGTGGAGGGCCGTAACTTGGACATTCTGCAGCCGGATGTCATGTGGGTCG
GTGGTATGACGGAGTTGCTCAAGGTCTCCGCCCTTGCCAGTGCCTACGAC
CTCCCCGTTGTTCCTCACGCATCTGGACCTTACTCCTACCACTTTGTGGT
TTCGCAACCCAATACACCCTTCCAGGAATACCTCGCCAACTCTGCAGATG
GACACACTGTTGAGCCCGTCTTCGGAAACCTCTTCCTCAACGAGCCGATC
CCTACTAAGGGATACCTGGATGTATCGATCCTGGACAAGCCGGGCTTCGG
CCTCGAGCTAAACCCTGCTGCGTCTCTTATCCCAGCAGCTTCAATTCTCA
CTCCTGCACCCCAAAAGGCACTGGTTGCTCCAACTGAGAACCAGCAGGAG
TCTACTTGAGTCAAAGGAGGTCACTGGTTGATTGACAGTAACATCTCCAC
CCCCATGACTCGCTGGGCACAATACCGTGGCTCTCGCACATCATGGGGTA
TTAACGTCCTGGGCTCTTTCTGCGTCGAGATTGAAGCTACCGACGGGACT
AAGGGATTTGCCACGGGATTCGGTGGTCCCCCAGCTTGTTGGCTGGTCCA
TCAACACTTTGAGCGCTTCCTGCTTGGTGCTGATGGGTTCTACCGGACAA
TTTCCCCGCATCAAAGAGATCCGCACCTTCATCATTGATGGTGTGGGATC
CGGAGGTGATTATCATAATACCCCAGAGATACCAATGACCTGTTCGAGAA
GATGTACCGGGGATCGATGTTCTATGGCAGAAAAGGTCTCCCTGTTGCCG
TCATCTCAGTGATTGATTTGGCTATCTGGGACCTTCTGGGCAAGATTCGC
AACGAACCCGTTTACAAGCTCATTGGCGGCGCTACCCGTTCGCGTCTGGA
CTTCTACTGCACTGGACCCCAGCCCGCTTCGGCCAAGGCCATGGGTTTCT
CCGGAGCCAAGGTCGCTCTTCCCCATGGCCCTGACGAGGGTACGGAAGGA
CTCTTGAAGAACGTCGACTACCTCCGCAAGCAGCGGGAATCAGTCGGTCC
CAACTTCCCTCTGCGGGTCGACTGCTACATGTCCCTGAACGTTCCATACA
CAATTGAGCTGGTCAAGCGTTGTGAGGCGGAAGGAATCAACATTGACTGG
TGGGAAGAATGCTTGACCCCGGATGACTTCGACGGTCATGCGCTTTTGAA
GAGAGCCCACCCCACTGTCAAGTTCACCACCGGAGAGCACGAGTACTCAC
GGTACGGTTTCCGAAAGCTCGTGGAGGGCCGTAACTTGGACATTCTGCAG
CCGGATGTCATGTGGGTCGGTGGTATGACGGAGTTGCTCAAGGTCTCCGC
CCTTGCCAGTGCCTACGACCTCCCCGTTGTTCCTCACGCATCTGGACCTT
ACTCCTACCACTTTGTGGTTTCGCAACCCAATACACCCTTCCAGGAATAC
CTCGCCAACTCTGCAGATGGACACACTGTTGAGCCCGTCTTCGGAAACCT
CTTCCTCAACGAGCCGATCCCTACTAAGGGATACCTGGATGTATCGATCC
TGGACAAGCCGGGCTTCGGCCTCGAGCTAAACCCTGCTGCGTCTCTTATC
CCAGCAGCTTCAATTCTCACTCCTGCACCCCAAAAGGCACTGGTTGCTCC
AACTGAGAACCAGCAGGAGTCTACTTGAGTCAAAGGAGGTCACTGGTTGA
TTGACAGTAACATCTCCACCCCCATGACTCGCTGGGCACAATACCGTGGC
TCTCGCACATCATGGGGTATTAACGTCCTGGGCTCTTTCTGCGTCGAGAT
TGAAGCTACCGACGGGACTAAGGGATTTGCCACGGGATTCGGTGGTCCCC
CAGCTTGTTGGCTGGTCCATCAACACTTTGAGCGCTTCCTGCTTGGTGCT
GATGGGTTCTACCGGACAATTTCCCCGCATCAAAGAGATCCGCACCTTCA
TCATTGATGGTGTGGGATCCGGAGGTGATTATCATAATACCCCAGAGATA
CCAATGACCTGTTCGAGAAGATGTACCGGGGATCGATGTTCTATGGCAGA
AAAGGTCTCCCTGTTGCCGTCATCTCAGTGATTGATTTGGCTATCTGGGA
CCTTCTGGGCAAGATTCGCAACGAACCCGTTTACAAGCTCATTGGCGGCG
CTACCCGTTCGCGTCTGGACTTCTACTGCACTGGACCCCAGCCCGCTTCG
GCCAAGGCCATGGGTTTCTCCGGAGCCAAGGTCGCTCTTCCCCATGGCCC
TGACGAGGGTACGGAAGGACTCTTGAAGAACGTCGACTACCTCCGCAAGC
AGCGGGAATCAGTCGGTCCCAACTTCCCTCTGCGGGTCGACTGCTACATG
TCCCTGAACGTTCCATACACAATTGAGCTGGTCAAGCGTTGTGAGGCGGA
AGGAATCAACATTGACTGGTGGGAAGAATGCTTGACCCCGGATGACTTCG
ACGGTCATGCGCTTTTGAAGAGAGCCCACCCCACTGTCAAGTTCACCACC
GGAGAGCACGAGTACTCACGGTACGGTTTCCGAAAGCTCGTGGAGGGCCG
TAACTTGGACATTCTGCAGCCGGATGTCATGTGGGTCGGTGGTATGACGG
AGTTGCTCAAGGTCTCCGCCCTTGCCAGTGCCTACGACCTCCCCGTTGTT
CCTCACGCATCTGGACCTTACTCCTACCACTTTGTGGTTTCGCAACCCAA
TACACCCTTCCAGGAATACCTCGCCAACTCTGCAGATGGACACACTGTTG
AGCCCGTCTTCGGAAACCTCTTCCTCAACGAGCCGATCCCTACTAAGGGA
TACCTGGATGTATCGATCCTGGACAAGCCGGGCTTCGGCCTCGAGCTAAA
CCCTGCTGCGTCTCTTATCCCAGCAGCTTCAATTCTCACTCCTGCACCCC
AAAAGGCACTGGTTGCTCCAACTGAGAACCAGCAGGAGTCTACTTGAGTC
AAAGGAGGTCACTGGTTGATTGACAGTAACATCTCCACCCCCATGACTCG
CTGGGCACAATACCGTGGCTCTCGCACATCATGGGGTATTAACGTCCTGG
GCTCTTTCTGCGTCGAGATTGAAGCTACCGACGGGACTAAGGGATTTGCC
ACGGGATTCGGTGGTCCCCCAGCTTGTTGGCTGGTCCATCAACACTTTGA
GCGCTTCCTGCTTGGTGCTGATGGGTTCTACCGGACAATTTCCCCGCATC
AAAGAGATCCGCACCTTCATCATTGATGGTGTGGGATCCGGAGGTGATTA
TCATAAT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0050032L-rhamnonate dehydratase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001853KJC3_001853Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001853-T1KJC3_001853-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001853-T1.cdsKJC3_001853-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001853-T1.utr3p1KJC3_001853-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001853-T1.exon3KJC3_001853-T1.exon3Aspergillus niger KJC3exon
KJC3_001853-T1.exon2KJC3_001853-T1.exon2Aspergillus niger KJC3exon
KJC3_001853-T1.exon1KJC3_001853-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001853-T1.utr5p1KJC3_001853-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR023444
DBxrefInterPro:IPR036849
DBxrefInterPro:IPR029065
DBxrefInterPro:IPR029017
DBxrefInterPro:IPR013341
DBxrefInterPro:IPR013342
DBxrefPFAM:PF02746
DBxrefPFAM:PF13378
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:874977..876690 -
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