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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:908550..911228- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001864-T1 ID=KJC3_001864-T1|Name=KJC3_001864-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2679bp|location=Sequence derived from alignment at ch2:908550..911228- (Aspergillus niger KJC3)
CTCGCTTTGGGGGGCTTTCAAGACACGGATCAACCGCACAGCGGCTATCG
CTGTAGTCTCTCGTTTGGCTGTCGGCCCTACCTTAGCGATCATTGTCTTA
CCCTTATTTCCATTGCTTGTTGACCCTCTTGTTTTGGGTGGAGACCGAGA
TTAAGTCCCGCCCGCCTGCCTGGAGACACCCGCTATCCATGCAATCAATC
TACGACCAGAGACGTCCGGTTCAGTTCTTGCTCTGCTGACAGCTTCATAT
CCCTATTGACTATGAACTTGTGTCCTTTGCATCAACTCTAACTGCGCCGA
TCATTGTTGGTTCTACGAACTCTCGTTACCACTCGATCTGATAGATACCC
AGGGAGTCTATATCAACCATGGTAGCCCTGTCGGTGGGCCTCTCAAGGGC
CCGCCAGCCTTCATTCATACTTCTTCTATTGTTTATGATTGTCTTTGTTG
CGCAAGTTTCAGTCGCTCAAGATTCCACCACAGACGACTCTACAACGACT
GCCGCTACCACAGCGGACACCTCTTCATCTACGGACTCGGCGACCACCAC
GTCAGACGACAGTACTACCACCTCAGCTGCAACCACGACGGACTCATCGT
CTAGCTCGACGACAGATGCTACGTCCACGTCAACTGACTCAAGCTCTTCT
TCTTCCTCTTCCTCAACCAGTGGCTACCCCATCGTCACTGTTCCACCCAC
AGCCGATGCACCGTACATGCAGAAGTCGAAGATGCCCGAGGGGACTCTGT
TCATCGTTGTCGGAGCTGTCCTTGGTGCCATTGGATTCGCTATTCTGGCC
TGGCGTGCCCTCGTAGCTTGGTCAGTCAACCGCTCCGTCCGACAAGCCGC
CATGGTTCGATCATCCGAAACCAAAGGACTGCTTCGCACCAAGAAGCGAA
GATCTCGCTCAAGGAGGTCGACCTCCGGACCAGGCGTAACCCTCGAGAAG
TCGGGGGCTGGAGGGCATCATCACCACCGTCACAGCCACCGACACCATAG
GTCCCCCTCCACCAAGACCCCCAGCTCCAACAGCGCGCTGTTCTTCTCTC
CCACCTCTGGGATGCATCGCGACAACAGCAGTAACAGGCGGTCTGCCTAT
CTCCCCGCTGGCTACTACAACACCGGCAGTGCAGCGCCTCCTCGGACTCA
CGAAGCACGCTTCTCGGCAGCTGATTTACCAGGCATGGGACCTCAGTCGC
AGGGCTATATGAAGGCCAAATCAGCCCCTAGCCCTCCCGAATCACCAGGT
CTAGTACCGGCAGCCAATGAACAAGACACGACGCCCCGTCGTAGTGCCAG
ACGGTCCCGCATGGAAGACCCTTCTACCAGCAGCGTGAATCTTTCTTCTC
CTCCTCAGGGCCGCACACCAAGCGCATACCTGGAGGACTTGTTCGATAAT
CACAGTACGCCTCAGAACAGACATTGATATGACCTATCTATGCTGCTGTG
CGAGCGATGATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
CTTTTTCCCATTCCTATTATCTCCTTTGCTGTGTTGTATAGTTTGGCATT
TTCTCCATTATGCAGATCCCTTGTTTGTTCATCCTTTCCACTTCCCTTCC
TGTCATATGTTTATTACTGTATTGTATATTGTTCATTTCCAGTTCCATAA
TGTTGGCTAATCCCCTTTCACGATCAACGAGTGTCTGTCTAGTTATTTAT
TGTTCCGCCCTTCTATCATTATCTAGTATGTTTTGCTTCTCTTCCTTCCA
TTTGGCGTCCATGCTATTACTGTAACCTCCATCAGTGGAAAGAAAAGCAC
GCATCTTATTAATGATTACCATTAGTATTACCAGTTAAGCGAGCGCACTG
TCCCACGACAGTCCCGATTATCGCACCAGCCAGCACTTTGACCAACCCGC
AGTCCTTCCTTACCCTAGCGAGTTCCAGAATGAGTATTAGGTACCCAATA
ATAAAGGAAAGTCATTACAGCGAAAGAAATGAAGAGCCCGAAGAGAATGG
TAAGAAAGGAAAAAAAGAATAAGATATAGGAAATAATGAAATGGGATAAA
CAAAAAAAGCAGACTGAGGATTTATACTATACGTTTAGCGTATACGAAAC
AACACAAGAACTGCTCCGCAACACTCCCTTCCCTTATTCTTGCCCAATAT
AATATGATACAGACGCCTCTCCGCCGCCCAATAGAAAAAGGAAAAGAAGA
ATGTAAATATAGGTGTGTATAAAACAGACAAGTGTATAGTAGGAACGGAG
CCAAGCTAATCCAAATCAAGTCAAGTCAAATTGGAAGAAGTGAAAGGGCC
GGATGGGTCCAAGACGCCGCAAACCAAGCCAAGAAGTGGGAAAAAGGCAG
GAGAAAGAGGCAGAAGGAAGAAAGATGTTCTCACATACGTAATCACAATA
ACAATGAATGCTGGCTACAATGTTGGATACACAAAAATCATGTCAGTTTA
TAGAGAATTGGGTGAGAAGCCCCCTTGACAAGGAGAAAGGTGCGGCAAGG
CGGCATGATTTCAGTCTGCGTCCAATTTGCCGCCAAACTCGCCAAGGAGG
ATATCGTCTGGGGCAGGACCGCGGCTGTTCCGTACTGTTGTTGATTGCCA
CGAGTCAGTTGAAAGGTGCCACGGTAACGTGCTTGTGAGATGGATGGGTG
ACTTACTCCACTCGGCCTCGACGCGGAGG back to topCoding sequence (CDS) from alignment at ch2:908550..911228- >KJC3_001864-T1 ID=KJC3_001864-T1|Name=KJC3_001864-T1|organism=Aspergillus niger KJC3|type=CDS|length=1059bp|location=Sequence derived from alignment at ch2:908550..911228- (Aspergillus niger KJC3)
ATGGTAGCCCTGTCGGTGGGCCTCTCAAGGGCCCGCCAGCCTTCATTCAT
ACTTCTTCTATTGTTTATGATTGTCTTTGTTGCGCAAGTTTCAGTCGCTC
AAGATTCCACCACAGACGACTCTACAACGACTGCCGCTACCACAGCGGAC
ACCTCTTCATCTACGGACTCGGCGACCACCACGTCAGACGACAGTACTAC
CACCTCAGCTGCAACCACGACGGACTCATCGTCTAGCTCGACGACAGATG
CTACGTCCACGTCAACTGACTCAAGCTCTTCTTCTTCCTCTTCCTCAACC
AGTGGCTACCCCATCGTCACTGTTCCACCCACAGCCGATGCACCGTACAT
GCAGAAGTCGAAGATGCCCGAGGGGACTCTGTTCATCGTTGTCGGAGCTG
TCCTTGGTGCCATTGGATTCGCTATTCTGGCCTGGCGTGCCCTCGTAGCT
TGGTCAGTCAACCGCTCCGTCCGACAAGCCGCCATGGTTCGATCATCCGA
AACCAAAGGACTGCTTCGCACCAAGAAGCGAAGATCTCGCTCAAGGAGGT
CGACCTCCGGACCAGGCGTAACCCTCGAGAAGTCGGGGGCTGGAGGGCAT
CATCACCACCGTCACAGCCACCGACACCATAGGTCCCCCTCCACCAAGAC
CCCCAGCTCCAACAGCGCGCTGTTCTTCTCTCCCACCTCTGGGATGCATC
GCGACAACAGCAGTAACAGGCGGTCTGCCTATCTCCCCGCTGGCTACTAC
AACACCGGCAGTGCAGCGCCTCCTCGGACTCACGAAGCACGCTTCTCGGC
AGCTGATTTACCAGGCATGGGACCTCAGTCGCAGGGCTATATGAAGGCCA
AATCAGCCCCTAGCCCTCCCGAATCACCAGGTCTAGTACCGGCAGCCAAT
GAACAAGACACGACGCCCCGTCGTAGTGCCAGACGGTCCCGCATGGAAGA
CCCTTCTACCAGCAGCGTGAATCTTTCTTCTCCTCCTCAGGGCCGCACAC
CAAGCGCATACCTGGAGGACTTGTTCGATAATCACAGTACGCCTCAGAAC
AGACATTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001864-T1.utr5p1 | KJC3_001864-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-33) |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:908550..911228 - |
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