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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:917990..920408+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001869-T1 ID=KJC3_001869-T1|Name=KJC3_001869-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2419bp|location=Sequence derived from alignment at ch2:917990..920408+ (Aspergillus niger KJC3)
CCGAACCCTGGCGGTTGATCAGTTGCTCAAGCAATAATCCACTTGCTCCC
GCCTCACAAGCAATCCTCCTCTTCCCTCTTTTCTCCAATCCTCTCCTCCT
CTTTCCTTCTCTTCCTCCCACCTCTCCTCCTCCCTCTCCCTCCTCCCCTC
CCCCTCCCCTCTCGACAATTCGTCTCCTCCGCCATGACGAATATTCATCC
CGAGTCCCCAGAGGACTTCGAGTTCATCGAAACTCCACCCGCCTCCTGCA
CCACTCCCGCTGACGATTGCGGTGTGCGGACTACCTCGGTGAGTTGTACC
ACATGGGGAGCTCCTGAAGAGCTACACCAGTGACCTTAACACATACCTCT
CAGAGCAGGACTGGTCAATTCCAAATGTCAATAGGCTAATCTTTTCTCGT
TCTTCCTAGTATCCGGCCATTAAAAATGCCCCCGTCCCCGCGGATTCTCA
GGGTAGCGATAGCTTCTCCAACACCCTCCTCTTCGCTCTCCTCATCCTTG
TCCCATGGTATCTTGCCCGCCAGATTGGTGGTGGTTTCTACACCACCATC
TTCTTCGCCATCTTCACCACCGTTCCCATTCTAATGGCCTTCTGGTCCAT
CGCCTCTTCCATCTCTCCCCGCAAGAACGAAAAGGCCAAGTATGCTGGTC
GTCCCGTCGAGTACTACTTGAACTTCCACAGCGAGCATGACCGTACTGCC
TACCGCGGCAAGAGCAAGATCCCCATGGAAGTCTTCTACGAGAAGTACTT
CAATGGCGAGGTGGACTTCAAGTGTGATGCCCTGGAGGCTCTGGAGTTCA
GACACGACTGGGCCAACTTCCGCTTCACCATGGGTCTCTACAAGCACTTC
CTCTTCGGTTTCATCCCCGAGATGCTGATGCACACCCGTTCCCAAGGTAC
GTGATTATCTTCAATTGCATTTAGCACGGTGGGCCAGATCTCGTGCTGAC
TTCGAGCTACTTCGGTAGATGAGGAGCAGGTTCGTGACCACTACGACCGC
GGTGATGACTTCTACGCTTGGTTCTTGGGCCCCCGCATGATCTACACTTC
CGGTATCATCAGCGACCCCAACAAGGAAGAGACTCTCGAGGAACTTCAGG
ACAACAAGCTGGCTGTTGTTTGCGAAAAGATCGGTGTTAAGCCCGGTGAC
ACTATCCTTGATCTCGGTTGTGGCTGGGGTACTCTGGCTAAGTATGCTTC
GGTTCACTATGGTGCTCAGGTCACCGGTATCACCTTGGGTCGTAACCAGA
CTGCTTGGGGTAACAAGGGTCTTCGCAATGCTGGTATTGAGGATTCTCAG
AGCCGTATCCTGTGCCTTGACTACCGTGACGCTCCTCGGGTTGATGGCGG
CTACAAGAAGATCACCTGTCTCGAGATGGCCGAGCACGTCGGTGTCCGTC
ACTTCACTTCCTTCCTTTCTCAGGTCTATGACATGCTGGACGACGATGGT
GTCTTCTTCCTGCAGATCGCTGGTCTGCGCAAGTCTTGGCAGTATGAGGA
TCTCATCTGGGGTCTTTTCATGAACAAATACATCTTCCCTGGCGCTGACG
CTAGCACTCCCCTTGGCTTCGTCGTTGACAGACTGGAAGCTGCTGGATTC
GAAATTAAGAGCATTGACACTGTTGGTGTTCACTACTCTGCTACTCTCTG
GCGCTGGTACCGGAACTGGATGGGCAACCGTGACAAGGTCGAGGCCAAGT
ACGGCAAGAGATGGTTCAGAGTGAGTGTTTTAAACCCTGGTTCATTGTAT
ATGACAGGATAAGACTAACATGTGACTACCTTCCAGATCTGGGAATACTT
CTTGGCTTACTCCACCATCACCTCCCGCCAGGGTGGTGCTACCTGCTGGC
AGCTTACCCTCGTTAAGAACATTAACTCCACCCACCGTGTTGAGGGTATT
CCCAGCCAGTATGGTCTCAGCGGTGCCCGTGAGGCCGCCATCGCCCGCGC
CGGCACCGGCGCTCTCCCCAAGGCTCACGTTCCTAACAAGGCTTAAATTT
ACCCCCCACGGCAATACCACGAATCTAGTAGGCGTCTTTGAAATAAATGA
CGGCCTCTAGATCTGATTTACCGTCCATCTCGAGGGCTGTTGCACTTTCT
TTGAAAAATCTATTCCAGGAAACGGACTGGAAAATCTAGAATGTGGAAGT
GAACAAAGGAGGATGATAACGATATCTTAAGTTTTTCTTATCTAAGGTAT
GTCCTGAATGAGAGGAGAGTGGATTTCTTTTCTCATACGGAAATGGAAAT
GAATGACACATTACTTTTATGTACAATGTTTCTGACCTATATACTACTTC
TTTTCTCTTCCCAGGAAAAGTCTGTATGTAATTGATAGCAAGCAGAATGA
AATCATGTAATAATGAATATAGAAGGTGTGATATGTAGCGTCGGCTGGGG
TGAAACCGCAATAGGATGG back to topCoding sequence (CDS) from alignment at ch2:917990..920408+ >KJC3_001869-T1 ID=KJC3_001869-T1|Name=KJC3_001869-T1|organism=Aspergillus niger KJC3|type=CDS|length=6216bp|location=Sequence derived from alignment at ch2:917990..920408+ (Aspergillus niger KJC3)
ATGACGAATATTCATCCCGAGTCCCCAGAGGACTTCGAGTTCATCGAAAC
TCCACCCGCCTCCTGCACCACTCCCGCTGACGATTGCGGTGTGCGGACTA
CCTCGTATCCGGCCATTAAAAATGCCCCCGTCCCCGCGGATTCTCAGGGT
AGCGATAGCTTCTCCAACACCCTCCTCTTCGCTCTCCTCATCCTTGTCCC
ATGGTATCTTGCCCGCCAGATTGGTGGTGGTTTCTACACCACCATCTTCT
TCGCCATCTTCACCACCGTTCCCATTCTAATGGCCTTCTGGTCCATCGCC
TCTTCCATCTCTCCCCGCAAGAACGAAAAGGCCAAGTATGCTGGTCGTCC
CGTCGAGTACTACTTGAACTTCCACAGCGAGCATGACCGTACTGCCTACC
GCGGCAAGAGCAAGATCCCCATGGAAGTCTTCTACGAGAAGTACTTCAAT
GGCGAGGTGGACTTCAAGTGTGATGCCCTGGAGGCTCTGGAGTTCAGACA
CGACTGGGCCAACTTCCGCTTCACCATGGGTCTCTACAAGCACTTCCTCT
TCGGTTTCATCCCCGAGATGCTGATGCACACCCGTTCCCAAGATGAGGAG
CAGGTTCGTGACCACTACGACCGCGGTGATGACTTCTACGCTTGGTTCTT
GGGCCCCCGCATGATCTACACTTCCGGTATCATCAGCGACCCCAACAAGG
AAGAGACTCTCGAGGAACTTCAGGACAACAAGCTGGCTGTTGTTTGCGAA
AAGATCGGTGTTAAGCCCGGTGACACTATCCTTGATCTCGGTTGTGGCTG
GGGTACTCTGGCTAAGTATGCTTCGGTTCACTATGGTGCTCAGGTCACCG
GTATCACCTTGGGTCGTAACCAGACTGCTTGGGGTAACAAGGGTCTTCGC
AATGCTGGTATTGAGGATTCTCAGAGCCGTATCCTGTGCCTTGACTACCG
TGACGCTCCTCGGGTTGATGGCGGCTACAAGAAGATCACCTGTCTCGAGA
TGGCCGAGCACGTCGGTGTCCGTCACTTCACTTCCTTCCTTTCTCAGGTC
TATGACATGCTGGACGACGATGGTGTCTTCTTCCTGCAGATCGCTGGTCT
GCGCAAGTCTTGGCAGTATGAGGATCTCATCTGGGGTCTTTTCATGAACA
AATACATCTTCCCTGGCGCTGACGCTAGCACTCCCCTTGGCTTCGTCGTT
GACAGACTGGAAGCTGCTGGATTCGAAATTAAGAGCATTGACACTGTTGG
TGTTCACTACTCTGCTACTCTCTGGCGCTGGTACCGGAACTGGATGGGCA
ACCGTGACAAGGTCGAGGCCAAGTACGGCAAGAGATGGTTCAGAATCTGG
GAATACTTCTTGGCTTACTCCACCATCACCTCCCGCCAGGGTGGTGCTAC
CTGCTGGCAGCTTACCCTCGTTAAGAACATTAACTCCACCCACCGTGTTG
AGGGTATTCCCAGCCAGTATGGTCTCAGCGGTGCCCGTGAGGCCGCCATC
GCCCGCGCCGGCACCGGCGCTCTCCCCAAGGCTCACGTTCCTAACAAGGC
TTAAATGACGAATATTCATCCCGAGTCCCCAGAGGACTTCGAGTTCATCG
AAACTCCACCCGCCTCCTGCACCACTCCCGCTGACGATTGCGGTGTGCGG
ACTACCTCGTATCCGGCCATTAAAAATGCCCCCGTCCCCGCGGATTCTCA
GGGTAGCGATAGCTTCTCCAACACCCTCCTCTTCGCTCTCCTCATCCTTG
TCCCATGGTATCTTGCCCGCCAGATTGGTGGTGGTTTCTACACCACCATC
TTCTTCGCCATCTTCACCACCGTTCCCATTCTAATGGCCTTCTGGTCCAT
CGCCTCTTCCATCTCTCCCCGCAAGAACGAAAAGGCCAAGTATGCTGGTC
GTCCCGTCGAGTACTACTTGAACTTCCACAGCGAGCATGACCGTACTGCC
TACCGCGGCAAGAGCAAGATCCCCATGGAAGTCTTCTACGAGAAGTACTT
CAATGGCGAGGTGGACTTCAAGTGTGATGCCCTGGAGGCTCTGGAGTTCA
GACACGACTGGGCCAACTTCCGCTTCACCATGGGTCTCTACAAGCACTTC
CTCTTCGGTTTCATCCCCGAGATGCTGATGCACACCCGTTCCCAAGATGA
GGAGCAGGTTCGTGACCACTACGACCGCGGTGATGACTTCTACGCTTGGT
TCTTGGGCCCCCGCATGATCTACACTTCCGGTATCATCAGCGACCCCAAC
AAGGAAGAGACTCTCGAGGAACTTCAGGACAACAAGCTGGCTGTTGTTTG
CGAAAAGATCGGTGTTAAGCCCGGTGACACTATCCTTGATCTCGGTTGTG
GCTGGGGTACTCTGGCTAAGTATGCTTCGGTTCACTATGGTGCTCAGGTC
ACCGGTATCACCTTGGGTCGTAACCAGACTGCTTGGGGTAACAAGGGTCT
TCGCAATGCTGGTATTGAGGATTCTCAGAGCCGTATCCTGTGCCTTGACT
ACCGTGACGCTCCTCGGGTTGATGGCGGCTACAAGAAGATCACCTGTCTC
GAGATGGCCGAGCACGTCGGTGTCCGTCACTTCACTTCCTTCCTTTCTCA
GGTCTATGACATGCTGGACGACGATGGTGTCTTCTTCCTGCAGATCGCTG
GTCTGCGCAAGTCTTGGCAGTATGAGGATCTCATCTGGGGTCTTTTCATG
AACAAATACATCTTCCCTGGCGCTGACGCTAGCACTCCCCTTGGCTTCGT
CGTTGACAGACTGGAAGCTGCTGGATTCGAAATTAAGAGCATTGACACTG
TTGGTGTTCACTACTCTGCTACTCTCTGGCGCTGGTACCGGAACTGGATG
GGCAACCGTGACAAGGTCGAGGCCAAGTACGGCAAGAGATGGTTCAGAAT
CTGGGAATACTTCTTGGCTTACTCCACCATCACCTCCCGCCAGGGTGGTG
CTACCTGCTGGCAGCTTACCCTCGTTAAGAACATTAACTCCACCCACCGT
GTTGAGGGTATTCCCAGCCAGTATGGTCTCAGCGGTGCCCGTGAGGCCGC
CATCGCCCGCGCCGGCACCGGCGCTCTCCCCAAGGCTCACGTTCCTAACA
AGGCTTAAATGACGAATATTCATCCCGAGTCCCCAGAGGACTTCGAGTTC
ATCGAAACTCCACCCGCCTCCTGCACCACTCCCGCTGACGATTGCGGTGT
GCGGACTACCTCGTATCCGGCCATTAAAAATGCCCCCGTCCCCGCGGATT
CTCAGGGTAGCGATAGCTTCTCCAACACCCTCCTCTTCGCTCTCCTCATC
CTTGTCCCATGGTATCTTGCCCGCCAGATTGGTGGTGGTTTCTACACCAC
CATCTTCTTCGCCATCTTCACCACCGTTCCCATTCTAATGGCCTTCTGGT
CCATCGCCTCTTCCATCTCTCCCCGCAAGAACGAAAAGGCCAAGTATGCT
GGTCGTCCCGTCGAGTACTACTTGAACTTCCACAGCGAGCATGACCGTAC
TGCCTACCGCGGCAAGAGCAAGATCCCCATGGAAGTCTTCTACGAGAAGT
ACTTCAATGGCGAGGTGGACTTCAAGTGTGATGCCCTGGAGGCTCTGGAG
TTCAGACACGACTGGGCCAACTTCCGCTTCACCATGGGTCTCTACAAGCA
CTTCCTCTTCGGTTTCATCCCCGAGATGCTGATGCACACCCGTTCCCAAG
ATGAGGAGCAGGTTCGTGACCACTACGACCGCGGTGATGACTTCTACGCT
TGGTTCTTGGGCCCCCGCATGATCTACACTTCCGGTATCATCAGCGACCC
CAACAAGGAAGAGACTCTCGAGGAACTTCAGGACAACAAGCTGGCTGTTG
TTTGCGAAAAGATCGGTGTTAAGCCCGGTGACACTATCCTTGATCTCGGT
TGTGGCTGGGGTACTCTGGCTAAGTATGCTTCGGTTCACTATGGTGCTCA
GGTCACCGGTATCACCTTGGGTCGTAACCAGACTGCTTGGGGTAACAAGG
GTCTTCGCAATGCTGGTATTGAGGATTCTCAGAGCCGTATCCTGTGCCTT
GACTACCGTGACGCTCCTCGGGTTGATGGCGGCTACAAGAAGATCACCTG
TCTCGAGATGGCCGAGCACGTCGGTGTCCGTCACTTCACTTCCTTCCTTT
CTCAGGTCTATGACATGCTGGACGACGATGGTGTCTTCTTCCTGCAGATC
GCTGGTCTGCGCAAGTCTTGGCAGTATGAGGATCTCATCTGGGGTCTTTT
CATGAACAAATACATCTTCCCTGGCGCTGACGCTAGCACTCCCCTTGGCT
TCGTCGTTGACAGACTGGAAGCTGCTGGATTCGAAATTAAGAGCATTGAC
ACTGTTGGTGTTCACTACTCTGCTACTCTCTGGCGCTGGTACCGGAACTG
GATGGGCAACCGTGACAAGGTCGAGGCCAAGTACGGCAAGAGATGGTTCA
GAATCTGGGAATACTTCTTGGCTTACTCCACCATCACCTCCCGCCAGGGT
GGTGCTACCTGCTGGCAGCTTACCCTCGTTAAGAACATTAACTCCACCCA
CCGTGTTGAGGGTATTCCCAGCCAGTATGGTCTCAGCGGTGCCCGTGAGG
CCGCCATCGCCCGCGCCGGCACCGGCGCTCTCCCCAAGGCTCACGTTCCT
AACAAGGCTTAAATGACGAATATTCATCCCGAGTCCCCAGAGGACTTCGA
GTTCATCGAAACTCCACCCGCCTCCTGCACCACTCCCGCTGACGATTGCG
GTGTGCGGACTACCTCGTATCCGGCCATTAAAAATGCCCCCGTCCCCGCG
GATTCTCAGGGTAGCGATAGCTTCTCCAACACCCTCCTCTTCGCTCTCCT
CATCCTTGTCCCATGGTATCTTGCCCGCCAGATTGGTGGTGGTTTCTACA
CCACCATCTTCTTCGCCATCTTCACCACCGTTCCCATTCTAATGGCCTTC
TGGTCCATCGCCTCTTCCATCTCTCCCCGCAAGAACGAAAAGGCCAAGTA
TGCTGGTCGTCCCGTCGAGTACTACTTGAACTTCCACAGCGAGCATGACC
GTACTGCCTACCGCGGCAAGAGCAAGATCCCCATGGAAGTCTTCTACGAG
AAGTACTTCAATGGCGAGGTGGACTTCAAGTGTGATGCCCTGGAGGCTCT
GGAGTTCAGACACGACTGGGCCAACTTCCGCTTCACCATGGGTCTCTACA
AGCACTTCCTCTTCGGTTTCATCCCCGAGATGCTGATGCACACCCGTTCC
CAAGATGAGGAGCAGGTTCGTGACCACTACGACCGCGGTGATGACTTCTA
CGCTTGGTTCTTGGGCCCCCGCATGATCTACACTTCCGGTATCATCAGCG
ACCCCAACAAGGAAGAGACTCTCGAGGAACTTCAGGACAACAAGCTGGCT
GTTGTTTGCGAAAAGATCGGTGTTAAGCCCGGTGACACTATCCTTGATCT
CGGTTGTGGCTGGGGTACTCTGGCTAAGTATGCTTCGGTTCACTATGGTG
CTCAGGTCACCGGTATCACCTTGGGTCGTAACCAGACTGCTTGGGGTAAC
AAGGGTCTTCGCAATGCTGGTATTGAGGATTCTCAGAGCCGTATCCTGTG
CCTTGACTACCGTGACGCTCCTCGGGTTGATGGCGGCTACAAGAAGATCA
CCTGTCTCGAGATGGCCGAGCACGTCGGTGTCCGTCACTTCACTTCCTTC
CTTTCTCAGGTCTATGACATGCTGGACGACGATGGTGTCTTCTTCCTGCA
GATCGCTGGTCTGCGCAAGTCTTGGCAGTATGAGGATCTCATCTGGGGTC
TTTTCATGAACAAATACATCTTCCCTGGCGCTGACGCTAGCACTCCCCTT
GGCTTCGTCGTTGACAGACTGGAAGCTGCTGGATTCGAAATTAAGAGCAT
TGACACTGTTGGTGTTCACTACTCTGCTACTCTCTGGCGCTGGTACCGGA
ACTGGATGGGCAACCGTGACAAGGTCGAGGCCAAGTACGGCAAGAGATGG
TTCAGAATCTGGGAATACTTCTTGGCTTACTCCACCATCACCTCCCGCCA
GGGTGGTGCTACCTGCTGGCAGCTTACCCTCGTTAAGAACATTAACTCCA
CCCACCGTGTTGAGGGTATTCCCAGCCAGTATGGTCTCAGCGGTGCCCGT
GAGGCCGCCATCGCCCGCGCCGGCACCGGCGCTCTCCCCAAGGCTCACGT
TCCTAACAAGGCTTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001869-T1.utr5p1 | KJC3_001869-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001869-T1.utr3p1 | KJC3_001869-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029063 |
| DBxref | PFAM:PF13649 |
| DBxref | PFAM:PF13489 |
| DBxref | PFAM:PF08241 |
| DBxref | PFAM:PF02353 |
| Product | Sphingolipid C9-methyltransferase 2 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:917990..920408 + |
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