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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:1011147..1014434+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001904-T1 ID=KJC3_001904-T1|Name=KJC3_001904-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3288bp|location=Sequence derived from alignment at ch2:1011147..1014434+ (Aspergillus niger KJC3)
AAGGTTTCTTCTTCAAGTTTCTAGCAAACGGCCCAAATCTCGATTCCATT
AAACCCCCTCCCACCCCCACCCCTTACTTACTCTTTTATCTTGGCTTCGA
GTGTTTTCATTTTCCCCTCCTGTCCTCCCTTCTCTGGTTTCCGTCTCCAA
ACATCCTTCCCAGGCTTCCCAACCGAACCTAATCAACTAGTCCACCCGCC
TTGTGACACTCCACCATCACTTGCTTATCGCCCAGGATGCCGCAATCCGA
TCGTCCACCATGTCTCCTCTATTAATGCCCAAGTTCCTTTCTCGAAGTCC
CGCTTCTCAGAAGCGTGGATATTCGGCCAGACCTTTTTGGGCGTGTTTAC
TGGCTTTCTTCCTCCTTGCTATTCTCAGCTGGGTCTCTGGTCGTCTGGCC
GAGCCTACCGAGCGGGTCTCGGTTCACCATGTCGCTCAGCTTCGAATGCG
GGACAACGCGCTGGAGGTATGATGAGGATAACCTTACCTAGCGAATTGGG
GACTTGCTAAGCTTGCTGTTCTGATTGACAGTGTCGTCTCGTCCGTCAAG
CCAAAGATCAATGTGCCTTCGTCCTATCAAACTGCGCCGATCACGAGGAG
GGTCTCTTCTCCTACCTCCAGTTCTACTACTGCACTGCGGCAAAGGCCAA
GCCGCTCGCTTTCATCGTCATCGTCCTGTGGCTATCGCTTCTCTTCAGCA
CCATCGGCATTGCTGCCAGCGACTTCCTCTGTATAGATCTAAGCACCTTG
GCCAGTGTCCTCGGTTTGAGTGAGAGCCTCACGGGTGTCACCTTTCTTGC
ATTCGGAAATGGCAGCCCGGACGTGTTTTCCACCTTCGCCGCCATGCGGT
CGAATAGTGGGAGCCTGGCCATTGGAGAGCTGCTCGGTGCGGCAAGCTTC
ATCACATCCATCGTTGCTGGCTCAATGGCGCTGGTCCGCCCCTTCAAGGT
CGCCCGGAGGAGTTTCGTTCGTGACGTAGGATATTTTATCCTTGCGATGG
CCTTTAGTATGTATCTTTTGGGCGATGGCCGCCTCCATGTCTGGGAATCT
GCCATGATGGTGGCGCTCTATTGTTTCTATGTTGCATTGGTGGTGACGTG
GCACTGGTATTTGACTCGACAACGGCGCTCCTACGAGAGGAATCTAGCTG
CTCGATCACACTTCCACATTCCGGACAATCAGGAACTTGACATCGAAGAA
GAGGAGGAAGATGACCCTGGTGTCGCGTCGGAGGCTACAAGTCTCCTTCA
CGGCGAGGATTTCGACGCCCTGGAGAGATCTGGTGTGCCAGCCTGGCGAG
AAGGGGAGGAGGACGACGAAACCCGGAATCGATACCTTGCTGAGATCCGC
GACAACATGCACATTTATCGGCCTACTACAAGGAGGCGCAATACGTTGAA
CCCCATCAGACCAAGTCTAGTGGGTGCTTTGGAGTTTCAGTCCGTCCTCT
CTTCACTTCAACGGTCGCGGAATATCCATCGCAACGAGTCGTTTGATCTC
GAGCGATGCTCAGATGGTGAGCGTTCGCGCTCGCATTCGCGCCTGTCAGA
CAATGCCTCTGTAGTGTCTCATCCGCGGGCCAGCCGTCCCTCGTTGGGTG
ACCGCTTGTCGCCCAATGGAGGCACTGGTTCAGCCCGCACTCGAGCGGTG
TCAGCCAACGCCGCCGCCGATCTGAAACTAGACACAAGCATGTTCACTGT
CAATAATCAGCAGCCGCTCCTCACTGTTCATCGGCCCTCTGTGGATACCC
AATCGCCATCAGAAACAACGGGCGCCTTAGCATCCGATCAGAGCCCAGGT
TCAAGCGGCTCCCCTCAGCTGGCCGTCTCGCAAGCCCCCAGTACTGAGTC
GAACACGCATCTTCAGAGCCCCAACCTCCTTGCGCCCCCTGGTGCTTTCC
ATGCCCCAACTTATCAAGTGTCGAGTTCTCGTCCTCGTTCGCCGCTTCCA
TTGTCCCCGCGCGGAACGACCCTCTCCCCAGGCCCGGCCAATGCTTTCCC
GGAGAGTCCTACAAGCCCATTCCCACCCTTTCAAGATGTACCCAGTTTCC
CATCCTCTGGGGCACCGAGCTTACGCCTGCCAGCCGCATCAAGCCCGACG
GAGCGGTTGCAGATTCACGATAGCGCCTTGGATGGTGGGAGTAACCGGAC
GACAACCCCGACATGGTGGTCCCATCTGTCGCTCACTTCCCAGCCCATCC
TCCCCACCCTTTTCCCGACTCTGGCTGACTGGAAATCCAAATCTTTCTGG
GAACGACTCTTGGGAATTGTTGCGGCCCCCAGTGTATTGCTCCTGACAAT
CACCCTCCCGGTGGTTGAACCTGTACAACCTGAAGCGGGTGCAAGCGCTG
TTCCCGTCATAGTAACTCCGGCGGACGGTGACGGTGCACCATCACCTGCT
GTGCGACTGCCGGAAGATAGTCCACTTCTTCGTGCGCTCGATCAAGAGCC
CATTTCACGACGGAACACAGTTGATCAAAACGGCAAGCCAGAACCAATTC
CGAGACATTCTCGTTTTGATTCCGAATTGCCGGCCATCCAGCCAAACATA
GATTCCCCACCACCACCATCGAAAGAGTGGTGCCTTTGGCTAGTTTGGGT
GCAACTCTTCGTGGGCCCCTTCTTCGTGGCCTTGATGTACTGGACGACAG
TTGACTCGGATCTGGATGTCGAACATCTTCTCCTGCCGTCCATGGTCTCT
CTTCTCTTTTCTTTGATATGCACCACCTGCCTGATGATCAGCACACGACA
CGACCTCGCTTCCCAGCCTCCAACTGCCTGGCGGCCCGTTCTAGCATTTT
TAGGCTTCATTGTCGCAATCTGCTGGATCGCAACCATCGCCACCGAGGTT
GTCAGCCTGCTCAAGACCCTAGGCGTTATCTTGAACATCAGTGACTCGCT
TCTCGGCCTGACCGTGTTTGCAGTGGGTAATTCCTTGGGTGACCTGGTAG
CAGACATCACGGTAGCCCGCCTAGGATATCCCGTAATGGCGCTGAGCGCC
TGTTTCGGAGGCCCCATGCTCAATATTCTTCTAGGTATTGGCCTAGGCGG
ACTATACATGACCGTGAATGCCAAACCAGAAGCCATCGCCGTGTCGGGTG
GTTCTTACGAGATTGAAGTCTCCAAGGTCCTCGTCATCAGCGGTGCTACT
CTACTCATCACCTTGATTGGTCTGCTGATCGTCGTCCCCTTGAATAATTG
GAGGATGGACCAGAAGATTGGCTGGGGCCTGGTCATTCTCTGGGTCATTA
GTACACTTGGCAATGTTCTCGCCGAGGTTCTATTCTGA back to topCoding sequence (CDS) from alignment at ch2:1011147..1014434+ >KJC3_001904-T1 ID=KJC3_001904-T1|Name=KJC3_001904-T1|organism=Aspergillus niger KJC3|type=CDS|length=5928bp|location=Sequence derived from alignment at ch2:1011147..1014434+ (Aspergillus niger KJC3)
ATGTCTCCTCTATTAATGCCCAAGTTCCTTTCTCGAAGTCCCGCTTCTCA
GAAGCGTGGATATTCGGCCAGACCTTTTTGGGCGTGTTTACTGGCTTTCT
TCCTCCTTGCTATTCTCAGCTGGGTCTCTGGTCGTCTGGCCGAGCCTACC
GAGCGGGTCTCGGTTCACCATGTCGCTCAGCTTCGAATGCGGGACAACGC
GCTGGAGTGTCGTCTCGTCCGTCAAGCCAAAGATCAATGTGCCTTCGTCC
TATCAAACTGCGCCGATCACGAGGAGGGTCTCTTCTCCTACCTCCAGTTC
TACTACTGCACTGCGGCAAAGGCCAAGCCGCTCGCTTTCATCGTCATCGT
CCTGTGGCTATCGCTTCTCTTCAGCACCATCGGCATTGCTGCCAGCGACT
TCCTCTGTATAGATCTAAGCACCTTGGCCAGTGTCCTCGGTTTGAGTGAG
AGCCTCACGGGTGTCACCTTTCTTGCATTCGGAAATGGCAGCCCGGACGT
GTTTTCCACCTTCGCCGCCATGCGGTCGAATAGTGGGAGCCTGGCCATTG
GAGAGCTGCTCGGTGCGGCAAGCTTCATCACATCCATCGTTGCTGGCTCA
ATGGCGCTGGTCCGCCCCTTCAAGGTCGCCCGGAGGAGTTTCGTTCGTGA
CGTAGGATATTTTATCCTTGCGATGGCCTTTAGTATGTATCTTTTGGGCG
ATGGCCGCCTCCATGTCTGGGAATCTGCCATGATGGTGGCGCTCTATTGT
TTCTATGTTGCATTGGTGGTGACGTGGCACTGGTATTTGACTCGACAACG
GCGCTCCTACGAGAGGAATCTAGCTGCTCGATCACACTTCCACATTCCGG
ACAATCAGGAACTTGACATCGAAGAAGAGGAGGAAGATGACCCTGGTGTC
GCGTCGGAGGCTACAAGTCTCCTTCACGGCGAGGATTTCGACGCCCTGGA
GAGATCTGGTGTGCCAGCCTGGCGAGAAGGGGAGGAGGACGACGAAACCC
GGAATCGATACCTTGCTGAGATCCGCGACAACATGCACATTTATCGGCCT
ACTACAAGGAGGCGCAATACGTTGAACCCCATCAGACCAAGTCTAGTGGG
TGCTTTGGAGTTTCAGTCCGTCCTCTCTTCACTTCAACGGTCGCGGAATA
TCCATCGCAACGAGTCGTTTGATCTCGAGCGATGCTCAGATGGTGAGCGT
TCGCGCTCGCATTCGCGCCTGTCAGACAATGCCTCTGTAGTGTCTCATCC
GCGGGCCAGCCGTCCCTCGTTGGGTGACCGCTTGTCGCCCAATGGAGGCA
CTGGTTCAGCCCGCACTCGAGCGGTGTCAGCCAACGCCGCCGCCGATCTG
AAACTAGACACAAGCATGTTCACTGTCAATAATCAGCAGCCGCTCCTCAC
TGTTCATCGGCCCTCTGTGGATACCCAATCGCCATCAGAAACAACGGGCG
CCTTAGCATCCGATCAGAGCCCAGGTTCAAGCGGCTCCCCTCAGCTGGCC
GTCTCGCAAGCCCCCAGTACTGAGTCGAACACGCATCTTCAGAGCCCCAA
CCTCCTTGCGCCCCCTGGTGCTTTCCATGCCCCAACTTATCAAGTGTCGA
GTTCTCGTCCTCGTTCGCCGCTTCCATTGTCCCCGCGCGGAACGACCCTC
TCCCCAGGCCCGGCCAATGCTTTCCCGGAGAGTCCTACAAGCCCATTCCC
ACCCTTTCAAGATGTACCCAGTTTCCCATCCTCTGGGGCACCGAGCTTAC
GCCTGCCAGCCGCATCAAGCCCGACGGAGCGGTTGCAGATTCACGATAGC
GCCTTGGATGGTGGGAGTAACCGGACGACAACCCCGACATGGTGGTCCCA
TCTGTCGCTCACTTCCCAGCCCATCCTCCCCACCCTTTTCCCGACTCTGG
CTGACTGGAAATCCAAATCTTTCTGGGAACGACTCTTGGGAATTGTTGCG
GCCCCCAGTGTATTGCTCCTGACAATCACCCTCCCGGTGGTTGAACCTGT
ACAACCTGAAGCGGGTGCAAGCGCTGTTCCCGTCATAGTAACTCCGGCGG
ACGGTGACGGTGCACCATCACCTGCTGTGCGACTGCCGGAAGATAGTCCA
CTTCTTCGTGCGCTCGATCAAGAGCCCATTTCACGACGGAACACAGTTGA
TCAAAACGGCAAGCCAGAACCAATTCCGAGACATTCTCGTTTTGATTCCG
AATTGCCGGCCATCCAGCCAAACATAGATTCCCCACCACCACCATCGAAA
GAGTGGTGCCTTTGGCTAGTTTGGGTGCAACTCTTCGTGGGCCCCTTCTT
CGTGGCCTTGATGTACTGGACGACAGTTGACTCGGATCTGGATGTCGAAC
ATCTTCTCCTGCCGTCCATGGTCTCTCTTCTCTTTTCTTTGATATGCACC
ACCTGCCTGATGATCAGCACACGACACGACCTCGCTTCCCAGCCTCCAAC
TGCCTGGCGGCCCGTTCTAGCATTTTTAGGCTTCATTGTCGCAATCTGCT
GGATCGCAACCATCGCCACCGAGGTTGTCAGCCTGCTCAAGACCCTAGGC
GTTATCTTGAACATCAGTGACTCGCTTCTCGGCCTGACCGTGTTTGCAGT
GGGTAATTCCTTGGGTGACCTGGTAGCAGACATCACGGTAGCCCGCCTAG
GATATCCCGTAATGGCGCTGAGCGCCTGTTTCGGAGGCCCCATGCTCAAT
ATTCTTCTAGGTATTGGCCTAGGCGGACTATACATGACCGTGAATGCCAA
ACCAGAAGCCATCGCCGTGTCGGGTGGTTCTTACGAGATTGAAGTCTCCA
AGGTCCTCGTCATCAGCGGTGCTACTCTACTCATCACCTTGATTGGTCTG
CTGATCGTCGTCCCCTTGAATAATTGGAGGATGGACCAGAAGATTGGCTG
GGGCCTGGTCATTCTCTGGGTCATTAGTACACTTGGCAATGTTCTCGCCG
AGGTTCTATTCTGAATGTCTCCTCTATTAATGCCCAAGTTCCTTTCTCGA
AGTCCCGCTTCTCAGAAGCGTGGATATTCGGCCAGACCTTTTTGGGCGTG
TTTACTGGCTTTCTTCCTCCTTGCTATTCTCAGCTGGGTCTCTGGTCGTC
TGGCCGAGCCTACCGAGCGGGTCTCGGTTCACCATGTCGCTCAGCTTCGA
ATGCGGGACAACGCGCTGGAGTGTCGTCTCGTCCGTCAAGCCAAAGATCA
ATGTGCCTTCGTCCTATCAAACTGCGCCGATCACGAGGAGGGTCTCTTCT
CCTACCTCCAGTTCTACTACTGCACTGCGGCAAAGGCCAAGCCGCTCGCT
TTCATCGTCATCGTCCTGTGGCTATCGCTTCTCTTCAGCACCATCGGCAT
TGCTGCCAGCGACTTCCTCTGTATAGATCTAAGCACCTTGGCCAGTGTCC
TCGGTTTGAGTGAGAGCCTCACGGGTGTCACCTTTCTTGCATTCGGAAAT
GGCAGCCCGGACGTGTTTTCCACCTTCGCCGCCATGCGGTCGAATAGTGG
GAGCCTGGCCATTGGAGAGCTGCTCGGTGCGGCAAGCTTCATCACATCCA
TCGTTGCTGGCTCAATGGCGCTGGTCCGCCCCTTCAAGGTCGCCCGGAGG
AGTTTCGTTCGTGACGTAGGATATTTTATCCTTGCGATGGCCTTTAGTAT
GTATCTTTTGGGCGATGGCCGCCTCCATGTCTGGGAATCTGCCATGATGG
TGGCGCTCTATTGTTTCTATGTTGCATTGGTGGTGACGTGGCACTGGTAT
TTGACTCGACAACGGCGCTCCTACGAGAGGAATCTAGCTGCTCGATCACA
CTTCCACATTCCGGACAATCAGGAACTTGACATCGAAGAAGAGGAGGAAG
ATGACCCTGGTGTCGCGTCGGAGGCTACAAGTCTCCTTCACGGCGAGGAT
TTCGACGCCCTGGAGAGATCTGGTGTGCCAGCCTGGCGAGAAGGGGAGGA
GGACGACGAAACCCGGAATCGATACCTTGCTGAGATCCGCGACAACATGC
ACATTTATCGGCCTACTACAAGGAGGCGCAATACGTTGAACCCCATCAGA
CCAAGTCTAGTGGGTGCTTTGGAGTTTCAGTCCGTCCTCTCTTCACTTCA
ACGGTCGCGGAATATCCATCGCAACGAGTCGTTTGATCTCGAGCGATGCT
CAGATGGTGAGCGTTCGCGCTCGCATTCGCGCCTGTCAGACAATGCCTCT
GTAGTGTCTCATCCGCGGGCCAGCCGTCCCTCGTTGGGTGACCGCTTGTC
GCCCAATGGAGGCACTGGTTCAGCCCGCACTCGAGCGGTGTCAGCCAACG
CCGCCGCCGATCTGAAACTAGACACAAGCATGTTCACTGTCAATAATCAG
CAGCCGCTCCTCACTGTTCATCGGCCCTCTGTGGATACCCAATCGCCATC
AGAAACAACGGGCGCCTTAGCATCCGATCAGAGCCCAGGTTCAAGCGGCT
CCCCTCAGCTGGCCGTCTCGCAAGCCCCCAGTACTGAGTCGAACACGCAT
CTTCAGAGCCCCAACCTCCTTGCGCCCCCTGGTGCTTTCCATGCCCCAAC
TTATCAAGTGTCGAGTTCTCGTCCTCGTTCGCCGCTTCCATTGTCCCCGC
GCGGAACGACCCTCTCCCCAGGCCCGGCCAATGCTTTCCCGGAGAGTCCT
ACAAGCCCATTCCCACCCTTTCAAGATGTACCCAGTTTCCCATCCTCTGG
GGCACCGAGCTTACGCCTGCCAGCCGCATCAAGCCCGACGGAGCGGTTGC
AGATTCACGATAGCGCCTTGGATGGTGGGAGTAACCGGACGACAACCCCG
ACATGGTGGTCCCATCTGTCGCTCACTTCCCAGCCCATCCTCCCCACCCT
TTTCCCGACTCTGGCTGACTGGAAATCCAAATCTTTCTGGGAACGACTCT
TGGGAATTGTTGCGGCCCCCAGTGTATTGCTCCTGACAATCACCCTCCCG
GTGGTTGAACCTGTACAACCTGAAGCGGGTGCAAGCGCTGTTCCCGTCAT
AGTAACTCCGGCGGACGGTGACGGTGCACCATCACCTGCTGTGCGACTGC
CGGAAGATAGTCCACTTCTTCGTGCGCTCGATCAAGAGCCCATTTCACGA
CGGAACACAGTTGATCAAAACGGCAAGCCAGAACCAATTCCGAGACATTC
TCGTTTTGATTCCGAATTGCCGGCCATCCAGCCAAACATAGATTCCCCAC
CACCACCATCGAAAGAGTGGTGCCTTTGGCTAGTTTGGGTGCAACTCTTC
GTGGGCCCCTTCTTCGTGGCCTTGATGTACTGGACGACAGTTGACTCGGA
TCTGGATGTCGAACATCTTCTCCTGCCGTCCATGGTCTCTCTTCTCTTTT
CTTTGATATGCACCACCTGCCTGATGATCAGCACACGACACGACCTCGCT
TCCCAGCCTCCAACTGCCTGGCGGCCCGTTCTAGCATTTTTAGGCTTCAT
TGTCGCAATCTGCTGGATCGCAACCATCGCCACCGAGGTTGTCAGCCTGC
TCAAGACCCTAGGCGTTATCTTGAACATCAGTGACTCGCTTCTCGGCCTG
ACCGTGTTTGCAGTGGGTAATTCCTTGGGTGACCTGGTAGCAGACATCAC
GGTAGCCCGCCTAGGATATCCCGTAATGGCGCTGAGCGCCTGTTTCGGAG
GCCCCATGCTCAATATTCTTCTAGGTATTGGCCTAGGCGGACTATACATG
ACCGTGAATGCCAAACCAGAAGCCATCGCCGTGTCGGGTGGTTCTTACGA
GATTGAAGTCTCCAAGGTCCTCGTCATCAGCGGTGCTACTCTACTCATCA
CCTTGATTGGTCTGCTGATCGTCGTCCCCTTGAATAATTGGAGGATGGAC
CAGAAGATTGGCTGGGGCCTGGTCATTCTCTGGGTCATTAGTACACTTGG
CAATGTTCTCGCCGAGGTTCTATTCTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001904-T1.utr5p1 | KJC3_001904-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR004837 |
| DBxref | PFAM:PF01699 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:1011147..1014434 + |
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