You are here

Home

KJC3_001923-T1, KJC3_001923-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001923-T1
Unique NameKJC3_001923-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:1083496..1085231-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001923-T1 ID=KJC3_001923-T1|Name=KJC3_001923-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1736bp|location=Sequence derived from alignment at ch2:1083496..1085231- (Aspergillus niger KJC3)
TCGACGAAGCATCTCCATCTTCTAGCAGTTAGGTTCGAGACTTTCGGATA
TATTCACTGTCTTGAGCGTTATCGACTCACTTAGCCCTCAAATATACTAC
CTGTTACTCACGTGGTAAATTCTTAATTGAAGCTCAGTCAAACTGAGCTC
AGATCTTTTGACGTGGTTCATTGTCAATCTCAATCCCCTACGCGTCCAGA
TCTCCAGATAAATAACTCAGAACTTACGTCTTGGACTCGCTCCGGTTTAT
TTTTTACGCGCCCAGTCAACGGATGTCGCCCTCCGATACACCTCCGGGCC
CTGTTCCATTTGGTCAGGAAAATGCAGCGCTACAACCTACACCTACGGAA
TGGTCTCTCAAGAGGCTCTGGAATCGGACAAGTTTGCCATACAAGGCAGG
TTCGTCCGTAATGCCTGGTGGTTCTGCTTCCCAAGCAGCCCAAGAAACCA
CGAAGGAGTCAAGGGGGGCAAGGTGAGTATTTCAGTATATTTCTGCGAAT
CTTCCCCTCATGTCTCGGTCTCTGACAAGCAAGCGCTCTTCTAGTATTCG
CTGGGCCCCACTCAATGTTGGACTCGAACGGCGCTTACAGACTCTGGTGG
TGTTATGCCATACTTTAACAATTGCAATTCTTTTAACAGCGTTCTTCTTC
GTGTGTGCAATCCCTTTATTCTGGCCTATTATACTGCCTTATCTTATCTA
TATATCCCTTTTTTCAACGGCAGCCACGTCAGGCGATTTGAGCGGTAGGT
GTGACTTTCTACGATCACTCGGCGTATGGTCAATATATGCATCGTATTTC
CCGGCCCGCTTGCATCGGTCAGAACCTCTCCTCCCAACCCGGAAGTATAT
CTTTGGCTATCATCCGCATGGAATCATCTCCCATGGCGCTTTTGCAGCGT
TTGCTACCGAGGCTCTTGGGTTTGCAGGACTCTTTCCTGGTATCACCAAC
ACCTTGCTTACGCTTGATTCGAACTTCCGAATCCCCTTCTACAGGGAATA
TGCACTAGCCATGGGGATTGCAAGTGTCTCGCGCGAATCATGCGAGAATT
TGCTATCAAAAGGTGGTATTGATGGCGAAGGAATGGGCCGTGCTGTAACT
ATCGTCATAGGTGGTGCGCGCGAGTCTCTTGATGCTCTTCCGCATACATT
GCGTCTTGTACTCAAGAGGCGTAAGGGTTTCATTAAACTGGCAATCCACA
CTGGCGCCGATCTTGTGCCTGTACTGGCCTTTGGTGAAAATGATCTCTAT
GAACAAGTGCGCTCTGAAAACCATCCTGTTATACACAAATTGCAGATGCT
GGTCAAACACACATTGGGGTTTACTATTCCGTTATTTCATGCCCGTGGTG
TGTTCAACTATGACGTGGGTCTGATGCCATATCGTCGGCCACTCAACATT
GTTGTCGGTCGCCCAATCCATGTTGTGCAGCAGCGGGATAGGGAGAAGAT
CGACGATGATTATATCAACCATCTTCATTCCTTGTACGTGCAGGAATTAG
AAAGAATATGGGAAGAGTGGAAAGATAAATATGCCAGGGACAGAACATCG
GAGATCGAAATCGTTGCTTGAGACACACTAACAGCGAAGGTTTATCGGAG
ATAAAGGAAGATTCTTTTGTATCACTATCTACTATATACATATGCTTATA
TATACCTTTGCCTAGATTTATTAGGCACATAAGGCTTCGGTGAGTACGGA
GTAAGGGGGTGAGCGAGGCGAGCAGATGCTTCCGAT
back to top

Coding sequence (CDS) from alignment at ch2:1083496..1085231-

>KJC3_001923-T1 ID=KJC3_001923-T1|Name=KJC3_001923-T1|organism=Aspergillus niger KJC3|type=CDS|length=2454bp|location=Sequence derived from alignment at ch2:1083496..1085231- (Aspergillus niger KJC3)
TATTCGCTGGGCCCCACTCAATGTTGGACTCGAACGGCGCTTACAGACTC
TGGTGGTGTTATGCCATACTTTAACAATTGCAATTCTTTTAACAGCGTTC
TTCTTCGTGTGTGCAATCCCTTTATTCTGGCCTATTATACTGCCTTATCT
TATCTATATATCCCTTTTTTCAACGGCAGCCACGTCAGGCGATTTGAGCG
GTAGGTGTGACTTTCTACGATCACTCGGCGTATGGTCAATATATGCATCG
TATTTCCCGGCCCGCTTGCATCGGTCAGAACCTCTCCTCCCAACCCGGAA
GTATATCTTTGGCTATCATCCGCATGGAATCATCTCCCATGGCGCTTTTG
CAGCGTTTGCTACCGAGGCTCTTGGGTTTGCAGGACTCTTTCCTGGTATC
ACCAACACCTTGCTTACGCTTGATTCGAACTTCCGAATCCCCTTCTACAG
GGAATATGCACTAGCCATGGGGATTGCAAGTGTCTCGCGCGAATCATGCG
AGAATTTGCTATCAAAAGGTGGTATTGATGGCGAAGGAATGGGCCGTGCT
GTAACTATCGTCATAGGTGGTGCGCGCGAGTCTCTTGATGCTCTTCCGCA
TACATTGCGTCTTGTACTCAAGAGGCGTAAGGGTTTCATTAAACTGGCAA
TCCACACTGGCGCCGATCTTGTGCCTGTACTGGCCTTTGGTGAAAATGAT
CTCTATGAACAAGTGCGCTCTGAAAACCATCCTGTTATACACAAATTGCA
GATGCTGGTCAAACACACATTGGGGTTTACTATTCCGTTATTTCATGCCC
GTGGTGTGTTCAACTATGACGTGGGTCTGATGCCATATCGTCGGCCACTC
AACATTGTTGTCGGTCGCCCAATCCATGTTGTGCAGCAGCGGGATAGGGA
GAAGATCGACGATGATTATATCAACCATCTTCATTCCTTGTACGTGCAGG
AATTAGAAAGAATATGGGAAGAGTGGAAAGATAAATATGCCAGGGACAGA
ACATCGGAGATCGAAATCGTTGCTTGAATGTCGCCCTCCGATACACCTCC
GGGCCCTGTTCCATTTGGTCAGGAAAATGCAGCGCTACAACCTACACCTA
CGGAATGGTCTCTCAAGAGGCTCTGGAATCGGACAAGTTTGCCATACAAG
GCAGGTTCGTCCGTAATGCCTGGTGGTTCTGCTTCCCAAGCAGCCCAAGA
AACCACGAAGGAGTCAAGGGGGGCAAGTATTCGCTGGGCCCCACTCAATG
TTGGACTCGAACGGCGCTTACAGACTCTGGTGGTGTTATGCCATACTTTA
ACAATTGCAATTCTTTTAACAGCGTTCTTCTTCGTGTGTGCAATCCCTTT
ATTCTGGCCTATTATACTGCCTTATCTTATCTATATATCCCTTTTTTCAA
CGGCAGCCACGTCAGGCGATTTGAGCGGTAGGTGTGACTTTCTACGATCA
CTCGGCGTATGGTCAATATATGCATCGTATTTCCCGGCCCGCTTGCATCG
GTCAGAACCTCTCCTCCCAACCCGGAAGTATATCTTTGGCTATCATCCGC
ATGGAATCATCTCCCATGGCGCTTTTGCAGCGTTTGCTACCGAGGCTCTT
GGGTTTGCAGGACTCTTTCCTGGTATCACCAACACCTTGCTTACGCTTGA
TTCGAACTTCCGAATCCCCTTCTACAGGGAATATGCACTAGCCATGGGGA
TTGCAAGTGTCTCGCGCGAATCATGCGAGAATTTGCTATCAAAAGGTGGT
ATTGATGGCGAAGGAATGGGCCGTGCTGTAACTATCGTCATAGGTGGTGC
GCGCGAGTCTCTTGATGCTCTTCCGCATACATTGCGTCTTGTACTCAAGA
GGCGTAAGGGTTTCATTAAACTGGCAATCCACACTGGCGCCGATCTTGTG
CCTGTACTGGCCTTTGGTGAAAATGATCTCTATGAACAAGTGCGCTCTGA
AAACCATCCTGTTATACACAAATTGCAGATGCTGGTCAAACACACATTGG
GGTTTACTATTCCGTTATTTCATGCCCGTGGTGTGTTCAACTATGACGTG
GGTCTGATGCCATATCGTCGGCCACTCAACATTGTTGTCGGTCGCCCAAT
CCATGTTGTGCAGCAGCGGGATAGGGAGAAGATCGACGATGATTATATCA
ACCATCTTCATTCCTTGTACGTGCAGGAATTAGAAAGAATATGGGAAGAG
TGGAAAGATAAATATGCCAGGGACAGAACATCGGAGATCGAAATCGTTGC
TTGAATGTCGCCCTCCGATACACCTCCGGGCCCTGTTCCATTTGGTCAGG
AAAATGCAGCGCTACAACCTACACCTACGGAATGGTCTCTCAAGAGGCTC
TGGAATCGGACAAGTTTGCCATACAAGGCAGGTTCGTCCGTAATGCCTGG
TGGTTCTGCTTCCCAAGCAGCCCAAGAAACCACGAAGGAGTCAAGGGGGG
CAAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016747transferase activity, transferring acyl groups other than amino-acyl groups
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001923KJC3_001923Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001923-T1KJC3_001923-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001923-T1.cdsKJC3_001923-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001923-T1.utr3p1KJC3_001923-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001923-T1.exon2KJC3_001923-T1.exon2Aspergillus niger KJC3exon
KJC3_001923-T1.exon1KJC3_001923-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001923-T1.utr5p1KJC3_001923-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09261G92
DBxrefInterPro:IPR007130
DBxrefPFAM:PF03982
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:1083496..1085231 -
Powered by Drupal