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KJC3_001971-T1, KJC3_001971-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001971-T1
Unique NameKJC3_001971-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:1311050..1313198-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001971-T1 ID=KJC3_001971-T1|Name=KJC3_001971-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2149bp|location=Sequence derived from alignment at ch2:1311050..1313198- (Aspergillus niger KJC3)
GCCATGTCCATTTTTTAAGCTATGACACAGCAATGATCGAACTACACTGA
CATGGGCATCTTTCTGCCTGAGGCACAAGCCATCCGGAAGATTACCCGAT
TAGGCAAATTCACCACATGCTACGAAGTGCGGTTTAGCCTAATATGAGAC
AGAAAGGCGCGAAATGGGCATTCAGGCATGGAGATCCTGGAAAATTTAAC
CGACTTTAAATGAACCTCCAAGGAAGAAGGAACTATCTACCTTATCGTCG
CACCAATCCTAGTGGTTGAAAGGACGTAAGCTCTCCAGCGTGAGACACCC
CGTATTGGTTGCTCTTCTCCAGTTGGAGCAGAATTGCGGGGTAGCGGGCG
GAAAGTGAGTGACCACCCCTCTTCATATATCGACTGCTTTCTTACTCCTT
GCTCTCTAAAAGTTCCAATTGCCCCTCGCTAGACACGTCTGCATTACTGA
AAAGAAAAGAAAGGAAGCAAAAATCCAGCACAGCCAGTCACAATGGGCGA
CAAAACCTCTGCCAAGTTCCTCTCCCTCGGCGCCATCATCCAGGAATTCA
ACGTGGACGGACAAAACATCGTTCAGGGATTCACCACGAAAGAAGCCTAC
GAGAAGCACAACTCGCCCTGGTTCGGCGCGAACATTGGACGCGTCGCTAA
CCGCATCAAGGACGGTGTTATTCAATCTCTCAATGGACAGCAATATCAAC
TCGAACTGAACGATCCTCCGAATGCGCTGCACGGAGGTAGTCGTGGATGG
GGTCGCTGCGAATTCGACGGTCCGACGGTGTTGAACCGCGATGGAAAGAC
CACGCTGCTGTATACGTACCTGAGTCGTGATGGGGAGGCAGGATACCCAG
GTACAGTAGAATTGAGGGTCTACTATACCACGAGTGAGGAGGTGGAGAAT
GGCAAGACTACATCCGTGCTGAAGATTGAATACGAGGCTGAGTTGGTGGG
CGACGAGTGCAAAGAGACAGTTGTTAATTTGACCAACCACAGGTATGTCT
GTCACATTTAATCTAAATCACTGAAGCGATAGGATACTGATTATCTCAAA
CAGCTACTTCAACCTCAACGGTGGCCCAACCACCGAAGGCACCATCACCA
AACTATCAACACAGGACTACCTACCCCTAGAGAACGGCATCCCATTGGGC
CCCATTGAGCCCTACCCCAGCGAAGTCACCAAGGAATTCACCTTCGGCCC
GCAGAACCAATTCGACGACGTCTTCGTTATGGACCGCGACCTGTCCCGCG
TTCCCCTCGATACGCGGGGTGAGCCCCTCCGCCTGCTGGCCGAGTTCCAG
CACCCAGACACGCGTCTGCACCTGCAAGTGCACAGCACGGAGCCGGCCTT
CCAATTCTACACGGGCCAAGGCATCGACGTACCCGAGACAGACGGGAAAC
CGAGTCGGGGCCCATTTGCGGGGTTCTGCATCGAACCCAGTCGGTTTGTC
AATGCGGTCAATGAGCCCGGATGGCGGCACACGGTCATTCTCCCGAAGGG
GAAGAAGTACGGTAGTACAATTGTGTATAAGGCCTGGAGGGAGTAGACCA
AAACAGAGCCAAAATTACAACGAGAACCCGAGGTAAACTGCCGGGAAAGA
GTCATGCCATGGTGAATCAATAAACGGCCGATCGGTGGAGAGAGATTATT
ATGTGCCTAGGCTCGGCATGGGCATGGACGTACATCGCCGAGGGCAGGGA
CATCTATCTATCTAGACTACGGAATTCTCCGTCTTTTAATTCCGCTACTA
GCCAGAAAATTTTTGATGATTATTATTTTTTTTCCCTGGATCTGTAAAAT
GTCTTGGCAATCATCCGATTATCCATGGCATCACATGATCACGACGTGCC
GATTTACCCTTATCACCCGTGATATGTATCCGAAGCGGGTCTACAGAGCA
GCGAGCAAAGTCCAGATTGAAACGAAACGGGGGTTATGGTGATCCACCTG
AAGCAGAAGCAAACAGCATGGGAGTGAAAAAGCCTCAGGTGGGTGGATGT
TTGCATGTGGGGATCCACACACATTACCAGATCGAGCCTTGTCAAGACAA
GGAAAAAAAAAACTAGGTGGGTTGCGGGTATAGAGACACCGGGATTGGAC
CGTTATATCCGCAATATCCGCAGTGGTTCTTGCTTCTCCGTGTGCGTAC
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Coding sequence (CDS) from alignment at ch2:1311050..1313198-

>KJC3_001971-T1 ID=KJC3_001971-T1|Name=KJC3_001971-T1|organism=Aspergillus niger KJC3|type=CDS|length=1986bp|location=Sequence derived from alignment at ch2:1311050..1313198- (Aspergillus niger KJC3)
CTACTTCAACCTCAACGGTGGCCCAACCACCGAAGGCACCATCACCAAAC
TATCAACACAGGACTACCTACCCCTAGAGAACGGCATCCCATTGGGCCCC
ATTGAGCCCTACCCCAGCGAAGTCACCAAGGAATTCACCTTCGGCCCGCA
GAACCAATTCGACGACGTCTTCGTTATGGACCGCGACCTGTCCCGCGTTC
CCCTCGATACGCGGGGTGAGCCCCTCCGCCTGCTGGCCGAGTTCCAGCAC
CCAGACACGCGTCTGCACCTGCAAGTGCACAGCACGGAGCCGGCCTTCCA
ATTCTACACGGGCCAAGGCATCGACGTACCCGAGACAGACGGGAAACCGA
GTCGGGGCCCATTTGCGGGGTTCTGCATCGAACCCAGTCGGTTTGTCAAT
GCGGTCAATGAGCCCGGATGGCGGCACACGGTCATTCTCCCGAAGGGGAA
GAAGTACGGTAGTACAATTGTGTATAAGGCCTGGAGGGAGTAGATGGGCG
ACAAAACCTCTGCCAAGTTCCTCTCCCTCGGCGCCATCATCCAGGAATTC
AACGTGGACGGACAAAACATCGTTCAGGGATTCACCACGAAAGAAGCCTA
CGAGAAGCACAACTCGCCCTGGTTCGGCGCGAACATTGGACGCGTCGCTA
ACCGCATCAAGGACGGTGTTATTCAATCTCTCAATGGACAGCAATATCAA
CTCGAACTGAACGATCCTCCGAATGCGCTGCACGGAGGTAGTCGTGGATG
GGGTCGCTGCGAATTCGACGGTCCGACGGTGTTGAACCGCGATGGAAAGA
CCACGCTGCTGTATACGTACCTGAGTCGTGATGGGGAGGCAGGATACCCA
GGTACAGTAGAATTGAGGGTCTACTATACCACGAGTGAGGAGGTGGAGAA
TGGCAAGACTACATCCGTGCTGAAGATTGAATACGAGGCTGAGTTGGTGG
GCGACGAGTGCAAAGAGACAGTTGTTAATTTGACCAACCACAGCTACTTC
AACCTCAACGGTGGCCCAACCACCGAAGGCACCATCACCAAACTATCAAC
ACAGGACTACCTACCCCTAGAGAACGGCATCCCATTGGGCCCCATTGAGC
CCTACCCCAGCGAAGTCACCAAGGAATTCACCTTCGGCCCGCAGAACCAA
TTCGACGACGTCTTCGTTATGGACCGCGACCTGTCCCGCGTTCCCCTCGA
TACGCGGGGTGAGCCCCTCCGCCTGCTGGCCGAGTTCCAGCACCCAGACA
CGCGTCTGCACCTGCAAGTGCACAGCACGGAGCCGGCCTTCCAATTCTAC
ACGGGCCAAGGCATCGACGTACCCGAGACAGACGGGAAACCGAGTCGGGG
CCCATTTGCGGGGTTCTGCATCGAACCCAGTCGGTTTGTCAATGCGGTCA
ATGAGCCCGGATGGCGGCACACGGTCATTCTCCCGAAGGGGAAGAAGTAC
GGTAGTACAATTGTGTATAAGGCCTGGAGGGAGTAGATGGGCGACAAAAC
CTCTGCCAAGTTCCTCTCCCTCGGCGCCATCATCCAGGAATTCAACGTGG
ACGGACAAAACATCGTTCAGGGATTCACCACGAAAGAAGCCTACGAGAAG
CACAACTCGCCCTGGTTCGGCGCGAACATTGGACGCGTCGCTAACCGCAT
CAAGGACGGTGTTATTCAATCTCTCAATGGACAGCAATATCAACTCGAAC
TGAACGATCCTCCGAATGCGCTGCACGGAGGTAGTCGTGGATGGGGTCGC
TGCGAATTCGACGGTCCGACGGTGTTGAACCGCGATGGAAAGACCACGCT
GCTGTATACGTACCTGAGTCGTGATGGGGAGGCAGGATACCCAGGTACAG
TAGAATTGAGGGTCTACTATACCACGAGTGAGGAGGTGGAGAATGGCAAG
ACTACATCCGTGCTGAAGATTGAATACGAGGCTGAGTTGGTGGGCGACGA
GTGCAAAGAGACAGTTGTTAATTTGACCAACCACAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0030246carbohydrate binding
GO:0016853isomerase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001971KJC3_001971Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001971-T1KJC3_001971-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001971-T1.cdsKJC3_001971-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001971-T1.utr3p1KJC3_001971-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001971-T1.exon3KJC3_001971-T1.exon3Aspergillus niger KJC3exon
KJC3_001971-T1.exon2KJC3_001971-T1.exon2Aspergillus niger KJC3exon
KJC3_001971-T1.exon1KJC3_001971-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001971-T1.utr5p2KJC3_001971-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_001971-T1.utr5p1KJC3_001971-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR011013
DBxrefInterPro:IPR018052
DBxrefInterPro:IPR014718
DBxrefInterPro:IPR008183
DBxrefPFAM:PF01263
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:1311050..1313198 -
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