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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:1342375..1343532+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001981-T1 ID=KJC3_001981-T1|Name=KJC3_001981-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1158bp|location=Sequence derived from alignment at ch2:1342375..1343532+ (Aspergillus niger KJC3)
ATGTCGCATACCATTGATGATACTCATTCCGTGACTGAAAGTTTACCGGA
TGCCCCCGGGGGCGCCCCTACGAAGCAGTCCTACCGATCATTCAAGTGAG
TGATCCCCTGAAAGCCTGGGGCGGCGCGTTGCTAATTCGACCGATCTACC
ATCCAGGAAGAAGTTTGCGAAGCTTAAGGTCAAGTTTGAGCTTCAGATGC
GAGAGAGCGAGTCCCTCATCCGCGAAGGGTTGCGTATCGAGGATCTGTCC
AAGAGGATTCAGGCACAGAATGAGTATGTTGCGCGCCCAACGTCTATGAC
TTCTCGGTCGCTTACAATTGATCAACCCACAGTCAGCTCCTAGAAGTCCT
GCTAGAGTTCAACGATAGTCTCCATGTGTCTCCAAGTATGCGGTACGATC
TGAGCGCGCCGGAAGATGAATCCTTCTTACCACCACCCGAGCGAGACATT
CCGAAATCGTACAATGACCCTGTCGTAGCGAGCTCTGTTCTACAAGAAGC
CAAGGCCAGACTGGCTGCTGGACGTTTGTCCAGCGATGCTTATCGTGAGG
TGGAGGATGATGTTAAGCGCGGTCAGGCTTTTGCACCGCGTATGCAGTAC
AGCACTCTGTCGACATTCCCCCATTCTGCGCCTTTGCAGCCAGACAATCC
CGACGACTGGAATCCCGCGCAAGAACTTGGATTTCTTACTCCCGAATATG
AGACCGAATACTGCCTGGCTCTAGATGCTAAACTGGGCGACGACGAGGCT
CTGGAGCAGCTCGAGTGCGTTCCTAAGAAGCCATCACTAGCGGAACGCGA
GAGAGAGGCCGCTCTTCGGAGCCATGTCTCTGTACACAATTGGTTGCGCC
AGAACCAACCCCAAATATTCTTGCAGGATAACGAGAACGCCTCGGAAAAG
TCCGGCTCTCGACCCTCCAATCTACGCACTTCTAAGAGGGCGCCGGCTCA
ATCACGCAAAGAGGAGGATGTGTATGATGATGACAGTATCCTGGAAACTG
CGTCAACCTCTGGAGGTACGAGAGGCAAGCGCAAGCGCGATGAAGATACC
GGATATCGACCCAAGGGCGGTAGCAGTCGCTCAAACCGGAAGAAGAAGGA
TGAGGAAAATGCGACCCCCAAACGGCCGTCGAAGCGGTCTTCGGGCGTCG
GTGCCTAA back to topCoding sequence (CDS) from alignment at ch2:1342375..1343532+ >KJC3_001981-T1 ID=KJC3_001981-T1|Name=KJC3_001981-T1|organism=Aspergillus niger KJC3|type=CDS|length=3114bp|location=Sequence derived from alignment at ch2:1342375..1343532+ (Aspergillus niger KJC3)
ATGTCGCATACCATTGATGATACTCATTCCGTGACTGAAAGTTTACCGGA
TGCCCCCGGGGGCGCCCCTACGAAGCAGTCCTACCGATCATTCAAGAAGA
AGTTTGCGAAGCTTAAGGTCAAGTTTGAGCTTCAGATGCGAGAGAGCGAG
TCCCTCATCCGCGAAGGGTTGCGTATCGAGGATCTGTCCAAGAGGATTCA
GGCACAGAATGATCAGCTCCTAGAAGTCCTGCTAGAGTTCAACGATAGTC
TCCATGTGTCTCCAAGTATGCGGTACGATCTGAGCGCGCCGGAAGATGAA
TCCTTCTTACCACCACCCGAGCGAGACATTCCGAAATCGTACAATGACCC
TGTCGTAGCGAGCTCTGTTCTACAAGAAGCCAAGGCCAGACTGGCTGCTG
GACGTTTGTCCAGCGATGCTTATCGTGAGGTGGAGGATGATGTTAAGCGC
GGTCAGGCTTTTGCACCGCGTATGCAGTACAGCACTCTGTCGACATTCCC
CCATTCTGCGCCTTTGCAGCCAGACAATCCCGACGACTGGAATCCCGCGC
AAGAACTTGGATTTCTTACTCCCGAATATGAGACCGAATACTGCCTGGCT
CTAGATGCTAAACTGGGCGACGACGAGGCTCTGGAGCAGCTCGAGTGCGT
TCCTAAGAAGCCATCACTAGCGGAACGCGAGAGAGAGGCCGCTCTTCGGA
GCCATGTCTCTGTACACAATTGGTTGCGCCAGAACCAACCCCAAATATTC
TTGCAGGATAACGAGAACGCCTCGGAAAAGTCCGGCTCTCGACCCTCCAA
TCTACGCACTTCTAAGAGGGCGCCGGCTCAATCACGCAAAGAGGAGGATG
TGTATGATGATGACAGTATCCTGGAAACTGCGTCAACCTCTGGAGGTACG
AGAGGCAAGCGCAAGCGCGATGAAGATACCGGATATCGACCCAAGGGCGG
TAGCAGTCGCTCAAACCGGAAGAAGAAGGATGAGGAAAATGCGACCCCCA
AACGGCCGTCGAAGCGGTCTTCGGGCGTCGGTGCCTAAATGTCGCATACC
ATTGATGATACTCATTCCGTGACTGAAAGTTTACCGGATGCCCCCGGGGG
CGCCCCTACGAAGCAGTCCTACCGATCATTCAAGAAGAAGTTTGCGAAGC
TTAAGGTCAAGTTTGAGCTTCAGATGCGAGAGAGCGAGTCCCTCATCCGC
GAAGGGTTGCGTATCGAGGATCTGTCCAAGAGGATTCAGGCACAGAATGA
TCAGCTCCTAGAAGTCCTGCTAGAGTTCAACGATAGTCTCCATGTGTCTC
CAAGTATGCGGTACGATCTGAGCGCGCCGGAAGATGAATCCTTCTTACCA
CCACCCGAGCGAGACATTCCGAAATCGTACAATGACCCTGTCGTAGCGAG
CTCTGTTCTACAAGAAGCCAAGGCCAGACTGGCTGCTGGACGTTTGTCCA
GCGATGCTTATCGTGAGGTGGAGGATGATGTTAAGCGCGGTCAGGCTTTT
GCACCGCGTATGCAGTACAGCACTCTGTCGACATTCCCCCATTCTGCGCC
TTTGCAGCCAGACAATCCCGACGACTGGAATCCCGCGCAAGAACTTGGAT
TTCTTACTCCCGAATATGAGACCGAATACTGCCTGGCTCTAGATGCTAAA
CTGGGCGACGACGAGGCTCTGGAGCAGCTCGAGTGCGTTCCTAAGAAGCC
ATCACTAGCGGAACGCGAGAGAGAGGCCGCTCTTCGGAGCCATGTCTCTG
TACACAATTGGTTGCGCCAGAACCAACCCCAAATATTCTTGCAGGATAAC
GAGAACGCCTCGGAAAAGTCCGGCTCTCGACCCTCCAATCTACGCACTTC
TAAGAGGGCGCCGGCTCAATCACGCAAAGAGGAGGATGTGTATGATGATG
ACAGTATCCTGGAAACTGCGTCAACCTCTGGAGGTACGAGAGGCAAGCGC
AAGCGCGATGAAGATACCGGATATCGACCCAAGGGCGGTAGCAGTCGCTC
AAACCGGAAGAAGAAGGATGAGGAAAATGCGACCCCCAAACGGCCGTCGA
AGCGGTCTTCGGGCGTCGGTGCCTAAATGTCGCATACCATTGATGATACT
CATTCCGTGACTGAAAGTTTACCGGATGCCCCCGGGGGCGCCCCTACGAA
GCAGTCCTACCGATCATTCAAGAAGAAGTTTGCGAAGCTTAAGGTCAAGT
TTGAGCTTCAGATGCGAGAGAGCGAGTCCCTCATCCGCGAAGGGTTGCGT
ATCGAGGATCTGTCCAAGAGGATTCAGGCACAGAATGATCAGCTCCTAGA
AGTCCTGCTAGAGTTCAACGATAGTCTCCATGTGTCTCCAAGTATGCGGT
ACGATCTGAGCGCGCCGGAAGATGAATCCTTCTTACCACCACCCGAGCGA
GACATTCCGAAATCGTACAATGACCCTGTCGTAGCGAGCTCTGTTCTACA
AGAAGCCAAGGCCAGACTGGCTGCTGGACGTTTGTCCAGCGATGCTTATC
GTGAGGTGGAGGATGATGTTAAGCGCGGTCAGGCTTTTGCACCGCGTATG
CAGTACAGCACTCTGTCGACATTCCCCCATTCTGCGCCTTTGCAGCCAGA
CAATCCCGACGACTGGAATCCCGCGCAAGAACTTGGATTTCTTACTCCCG
AATATGAGACCGAATACTGCCTGGCTCTAGATGCTAAACTGGGCGACGAC
GAGGCTCTGGAGCAGCTCGAGTGCGTTCCTAAGAAGCCATCACTAGCGGA
ACGCGAGAGAGAGGCCGCTCTTCGGAGCCATGTCTCTGTACACAATTGGT
TGCGCCAGAACCAACCCCAAATATTCTTGCAGGATAACGAGAACGCCTCG
GAAAAGTCCGGCTCTCGACCCTCCAATCTACGCACTTCTAAGAGGGCGCC
GGCTCAATCACGCAAAGAGGAGGATGTGTATGATGATGACAGTATCCTGG
AAACTGCGTCAACCTCTGGAGGTACGAGAGGCAAGCGCAAGCGCGATGAA
GATACCGGATATCGACCCAAGGGCGGTAGCAGTCGCTCAAACCGGAAGAA
GAAGGATGAGGAAAATGCGACCCCCAAACGGCCGTCGAAGCGGTCTTCGG
GCGTCGGTGCCTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0031011 | Ino80 complex |
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006338 | chromatin remodeling |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR032742 |
| DBxref | PFAM:PF14612 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:1342375..1343532 + |
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