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KJC3_001999-T1, KJC3_001999-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001999-T1
Unique NameKJC3_001999-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:1397433..1398764+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001999-T1 ID=KJC3_001999-T1|Name=KJC3_001999-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1332bp|location=Sequence derived from alignment at ch2:1397433..1398764+ (Aspergillus niger KJC3)
ATGTCGGATCCTATCCAGGTTGCCGGGAAGAGAAAGCGTGCCAGTACGTT
CCCCCAATTGCAATTTAAACCCGCGGTTCGCTCTTCAATCCTTTCTCTGC
TTTTCCTGCGTTTCCCTGCTTTCCCTTCCCCCCAAATCTCTCAGCCTTGC
TGTCTCATGTACAGCCGGTGACACCTCGTGCTATTCCCCGCCTGATTTTT
CTTATCGCCAACGCGGGAGATCAACATTCCTTTTTTTTCTCTCTTCTTTC
TTACTTTTTCTTCTTCACGGCTGTCTTTCTTTGTCTCTCGCGATCCCATC
ATCATCCGTTGATGGGTTAATTCCCTGCATCGCTATTCTTTCTACGTTGT
TTGTTAAAATCACAATCACCGTCTTTTTCTATTCTTGTCTCTGTGACACG
CCCTGTCTGTCGCATCACCCAGTGTCCAGCTCCATCTTAGCCTCATCATC
CTCAACCAACCGCGTGGATCTGTCTTTTTTCTGTTATCGCCATTAGAAAT
GGTTGCTGACTCGGTTGAACCTGCAGGGACGCAATCCTGCCCTCCCCCCG
AATTGCCCCAGCTCGTTGCGGAACAGCACACTCCCATCCCTGCTCATGAC
AAAGAGACCCAGCGTCTGATTGTCGTTCTCTCCCATGCCAGCTTGGAAAC
CTATCGGGCTTCCAGCGGACGCAATGGTTCCGGTCGTGATGAGAAGTACT
CCCTGCTCAACAGCGATGAACACATTGGTGTCATGCGCAAGATGAACCGG
GATATCAGCGAGGCTCGCCCGGATATCACACATCAGGTTGGTTGCTCTGT
CTGGGATAGCCAACAACGGCTTGGTGGATGGTTGCTAATGATATATGCTT
GTTAGTGCCTGCTCACCCTGCTCGACTCCCCCGTGAACAAGGCGGGTAAG
CTGCAGATCTTCATCCACACTGCCAAGGGTGTCTTGATCGAGGTGAACCC
TAGCGTGCGCATTCCTCGTACCTTCAAGCGATTCGCTGGTTTGATGGTAC
AGCTGTTGCACCGCCTCTCCATCCGTTCCACCAACTCCCAGGAGAAGCTC
CTGAAGGTCATCAAGAACCCCATCACCGACCACCTTCCCCCCAACTGCCG
CAAGGTGACCCTCAGTTTCGAAGCCCCCGTGGTGCGCACCCGCGACTACA
TCGAATCGCTAGGCCCCAAGGAGAGCGTCTGTATCTTCGTAGGTGCCATG
GCCAAGGGACACGATGACTTTGCCGACTCCTTCAAGGATGACACGATTTC
CATCAGTAACTACAGCTTGAGTGCCAGTGTCGCATGCAGCAAGTTCTGCC
ATGCCGCCGAGGAGGTGTGGGACATTGTCTGA
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Coding sequence (CDS) from alignment at ch2:1397433..1398764+

>KJC3_001999-T1 ID=KJC3_001999-T1|Name=KJC3_001999-T1|organism=Aspergillus niger KJC3|type=CDS|length=2340bp|location=Sequence derived from alignment at ch2:1397433..1398764+ (Aspergillus niger KJC3)
ATGTCGGATCCTATCCAGGTTGCCGGGAAGAGAAAGCGTGCCAGGACGCA
ATCCTGCCCTCCCCCCGAATTGCCCCAGCTCGTTGCGGAACAGCACACTC
CCATCCCTGCTCATGACAAAGAGACCCAGCGTCTGATTGTCGTTCTCTCC
CATGCCAGCTTGGAAACCTATCGGGCTTCCAGCGGACGCAATGGTTCCGG
TCGTGATGAGAAGTACTCCCTGCTCAACAGCGATGAACACATTGGTGTCA
TGCGCAAGATGAACCGGGATATCAGCGAGGCTCGCCCGGATATCACACAT
CAGTGCCTGCTCACCCTGCTCGACTCCCCCGTGAACAAGGCGGGTAAGCT
GCAGATCTTCATCCACACTGCCAAGGGTGTCTTGATCGAGGTGAACCCTA
GCGTGCGCATTCCTCGTACCTTCAAGCGATTCGCTGGTTTGATGGTACAG
CTGTTGCACCGCCTCTCCATCCGTTCCACCAACTCCCAGGAGAAGCTCCT
GAAGGTCATCAAGAACCCCATCACCGACCACCTTCCCCCCAACTGCCGCA
AGGTGACCCTCAGTTTCGAAGCCCCCGTGGTGCGCACCCGCGACTACATC
GAATCGCTAGGCCCCAAGGAGAGCGTCTGTATCTTCGTAGGTGCCATGGC
CAAGGGACACGATGACTTTGCCGACTCCTTCAAGGATGACACGATTTCCA
TCAGTAACTACAGCTTGAGTGCCAGTGTCGCATGCAGCAAGTTCTGCCAT
GCCGCCGAGGAGGTGTGGGACATTGTCTGAATGTCGGATCCTATCCAGGT
TGCCGGGAAGAGAAAGCGTGCCAGGACGCAATCCTGCCCTCCCCCCGAAT
TGCCCCAGCTCGTTGCGGAACAGCACACTCCCATCCCTGCTCATGACAAA
GAGACCCAGCGTCTGATTGTCGTTCTCTCCCATGCCAGCTTGGAAACCTA
TCGGGCTTCCAGCGGACGCAATGGTTCCGGTCGTGATGAGAAGTACTCCC
TGCTCAACAGCGATGAACACATTGGTGTCATGCGCAAGATGAACCGGGAT
ATCAGCGAGGCTCGCCCGGATATCACACATCAGTGCCTGCTCACCCTGCT
CGACTCCCCCGTGAACAAGGCGGGTAAGCTGCAGATCTTCATCCACACTG
CCAAGGGTGTCTTGATCGAGGTGAACCCTAGCGTGCGCATTCCTCGTACC
TTCAAGCGATTCGCTGGTTTGATGGTACAGCTGTTGCACCGCCTCTCCAT
CCGTTCCACCAACTCCCAGGAGAAGCTCCTGAAGGTCATCAAGAACCCCA
TCACCGACCACCTTCCCCCCAACTGCCGCAAGGTGACCCTCAGTTTCGAA
GCCCCCGTGGTGCGCACCCGCGACTACATCGAATCGCTAGGCCCCAAGGA
GAGCGTCTGTATCTTCGTAGGTGCCATGGCCAAGGGACACGATGACTTTG
CCGACTCCTTCAAGGATGACACGATTTCCATCAGTAACTACAGCTTGAGT
GCCAGTGTCGCATGCAGCAAGTTCTGCCATGCCGCCGAGGAGGTGTGGGA
CATTGTCTGAATGTCGGATCCTATCCAGGTTGCCGGGAAGAGAAAGCGTG
CCAGGACGCAATCCTGCCCTCCCCCCGAATTGCCCCAGCTCGTTGCGGAA
CAGCACACTCCCATCCCTGCTCATGACAAAGAGACCCAGCGTCTGATTGT
CGTTCTCTCCCATGCCAGCTTGGAAACCTATCGGGCTTCCAGCGGACGCA
ATGGTTCCGGTCGTGATGAGAAGTACTCCCTGCTCAACAGCGATGAACAC
ATTGGTGTCATGCGCAAGATGAACCGGGATATCAGCGAGGCTCGCCCGGA
TATCACACATCAGTGCCTGCTCACCCTGCTCGACTCCCCCGTGAACAAGG
CGGGTAAGCTGCAGATCTTCATCCACACTGCCAAGGGTGTCTTGATCGAG
GTGAACCCTAGCGTGCGCATTCCTCGTACCTTCAAGCGATTCGCTGGTTT
GATGGTACAGCTGTTGCACCGCCTCTCCATCCGTTCCACCAACTCCCAGG
AGAAGCTCCTGAAGGTCATCAAGAACCCCATCACCGACCACCTTCCCCCC
AACTGCCGCAAGGTGACCCTCAGTTTCGAAGCCCCCGTGGTGCGCACCCG
CGACTACATCGAATCGCTAGGCCCCAAGGAGAGCGTCTGTATCTTCGTAG
GTGCCATGGCCAAGGGACACGATGACTTTGCCGACTCCTTCAAGGATGAC
ACGATTTCCATCAGTAACTACAGCTTGAGTGCCAGTGTCGCATGCAGCAA
GTTCTGCCATGCCGCCGAGGAGGTGTGGGACATTGTCTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0008168methyltransferase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMG1KJC3_001999Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001999-T1.exon1KJC3_001999-T1.exon1Aspergillus niger KJC3exon
KJC3_001999-T1.exon2KJC3_001999-T1.exon2Aspergillus niger KJC3exon
KJC3_001999-T1.exon3KJC3_001999-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001999-T1.cdsKJC3_001999-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001999-T1KJC3_001999-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09263DFA
DBxrefInterPro:IPR029028
DBxrefInterPro:IPR029026
DBxrefInterPro:IPR005304
DBxrefPFAM:PF03587
Product18S rRNA pseudouridine methyltransferase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:1397433..1398764 +
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