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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:1409535..1411565- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002003-T1 ID=KJC3_002003-T1|Name=KJC3_002003-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2031bp|location=Sequence derived from alignment at ch2:1409535..1411565- (Aspergillus niger KJC3)
AGCATATAAGGAGCGTCTCTACTGCTTAAATCTGTCTTACAATCCAGAGG
AATATCAATCAATTGCGTATATTGTCTACTGGTGCCCTTGTGTAAGTTTG
ATGCTCCAAGGAAGCCTTTCCGACGGATTACCGAGGTTGGGGGAACCCGA
GACCGAGAGTTGTGCCTGGATGAATGTCTCCCCGCAACAACCTCCGAACC
ATCTATCCCTTTACTGTCGCAAGCCTAGTTGGCTCTCGCATCCCCAAGAT
ACACTGATCTCTCAATTGACTTGACTTTGATAATAGATATCTTGAACTCA
TTTTTTTATCCTTGCTCGTGCCTACAATTTCACATCATGAACCCCTCCAG
CTTCCGCACGGCTTCGCGCCACCTCCACCGCCTGTGTCGAGCGCCCGCAA
CTTCGCGCAATGCTTCGGTCCGTGGATATGCGACGACTTTCAACTGGGAG
GATCCTTTGGTTGCATCCGAGCTGTATACAGAGGAGGAATTGGCTATCCA
AGACACTGCTCGGCAATACTGCCAGGAACGACTGCTACCCCGCGTTCTAG
GTACGCCCGCCACTCCCTAAGGATATCCCAGTTAGGGAACCTTTCATGTG
CTAGAGTTATTGTGGCTAATAGCTATGCGCATACTAGATGCCTACCGGAA
CGAGAACTATGACCGCCAGATCCTGACCGAGATGGGCGAGCTCGGCCTCC
TCGGCGCGAACATTGAAGGGTATGGTTGCGCCGGCGCAAGCACCGTGGCC
TCCGGCCTGATCACGAAGGAAGTCGAGCGTGTGGACTCAGGATATCGTTC
AGGAATGTCTGTGCAGAGCTCTCTGGCTATGACGGCCATCCATGACTTTG
GTACACAGGAGCTGAAGGACAGACTCCTCCCGGAGCTGGCGAAGGGAAAA
CTGGCTGGATGCTTTGGTCTCACTGAGCCCAATCACGGCTCTGACCCTGG
CTCCATGGAGACAGTCGCCCGGGAGCACCCTACCAAGAAGGGTTACTACT
TGCTCTCTGGCACCAAGACCTGGATCACCAACTCCCCGATCTCCGACATC
ATGATCGTCTGGGCTAAGCTGCAGACCACGGGCAAGATCCGTGGATTCGT
CGTCGAGCGCAGCCAATGCCCACCGGGTACTCTGGAGACGCCCGCCATCA
AGAACAAGACCGCCCTGCGCGCCTCTATTACCGGCATGATCCAAATGGAT
GACTGCCCTGTTCCTGCGGAGAACATGTTCCCTGAAGTGCAAGGGCTCGC
TGGTCCCTTCACCTGCCTTAACAGCGCTCGTCTGGGCATTGCCTTTGGAG
CTATGGGTGCGCTTGAAGATTGCCTGAGCCGTGCGCGCACCTATGCACTT
GAGCGCAAGCAGTTCAAGGGTAACCCGCTGGCGAAGTACCAACTCATTCA
GAAGAAGCTGGTGGATGCGGCTACGGATGCTGCGTACGGCACTTTGGCTG
CCACGCAGGTCGCCCGGCTCAAGGATGCCGGAAAGTGCACACCGGAGATG
ATTTCGATGGTCAAGAGACAGAACTGTGACCGTGCCCTGGCTAACTCGAG
AATGTATGCCCTCCCCTGTCTTTTGATATGTTTTCTACCCTATGATCTTT
GGCTAGAATAGCCAGCTAACTTGGTTGATTCACCCATTACAGTCTTCAGG
AAGTGTTTGGTGGAAACGCCACCAGTGACGAGTACCATATTGCCAGGCAT
GTAGCCAACCTGTTCGTGGTGCAGACTTATGAGGGACAGAGTGACATTCA
TAGTAAGTACCATCTTATACCACCGAAGCAACATCTGACTTCTTGTATAC
TTGGCGACTAACCATAAACTAGCCCTGATCCTTGGTCGCGCCATCACCGG
TGTTCAGGCATTCGTCTAGACGGAGAAAGACATGACAGGCACATACACAC
ACCCTCTAGATGCTACTACCACCTTGACTCATAGTCTACCTATTTACCTA
CCTGATGAGCACACCATCACATACATGTACATATACAACCACAATATTTA
AACAAGAAATACCATAAACACAACTACACTA back to topCoding sequence (CDS) from alignment at ch2:1409535..1411565- >KJC3_002003-T1 ID=KJC3_002003-T1|Name=KJC3_002003-T1|organism=Aspergillus niger KJC3|type=CDS|length=5148bp|location=Sequence derived from alignment at ch2:1409535..1411565- (Aspergillus niger KJC3)
CCCTGATCCTTGGTCGCGCCATCACCGGTGTTCAGGCATTCGTCTAGTCT
TCAGGAAGTGTTTGGTGGAAACGCCACCAGTGACGAGTACCATATTGCCA
GGCATGTAGCCAACCTGTTCGTGGTGCAGACTTATGAGGGACAGAGTGAC
ATTCATAATGCCTACCGGAACGAGAACTATGACCGCCAGATCCTGACCGA
GATGGGCGAGCTCGGCCTCCTCGGCGCGAACATTGAAGGGTATGGTTGCG
CCGGCGCAAGCACCGTGGCCTCCGGCCTGATCACGAAGGAAGTCGAGCGT
GTGGACTCAGGATATCGTTCAGGAATGTCTGTGCAGAGCTCTCTGGCTAT
GACGGCCATCCATGACTTTGGTACACAGGAGCTGAAGGACAGACTCCTCC
CGGAGCTGGCGAAGGGAAAACTGGCTGGATGCTTTGGTCTCACTGAGCCC
AATCACGGCTCTGACCCTGGCTCCATGGAGACAGTCGCCCGGGAGCACCC
TACCAAGAAGGGTTACTACTTGCTCTCTGGCACCAAGACCTGGATCACCA
ACTCCCCGATCTCCGACATCATGATCGTCTGGGCTAAGCTGCAGACCACG
GGCAAGATCCGTGGATTCGTCGTCGAGCGCAGCCAATGCCCACCGGGTAC
TCTGGAGACGCCCGCCATCAAGAACAAGACCGCCCTGCGCGCCTCTATTA
CCGGCATGATCCAAATGGATGACTGCCCTGTTCCTGCGGAGAACATGTTC
CCTGAAGTGCAAGGGCTCGCTGGTCCCTTCACCTGCCTTAACAGCGCTCG
TCTGGGCATTGCCTTTGGAGCTATGGGTGCGCTTGAAGATTGCCTGAGCC
GTGCGCGCACCTATGCACTTGAGCGCAAGCAGTTCAAGGGTAACCCGCTG
GCGAAGTACCAACTCATTCAGAAGAAGCTGGTGGATGCGGCTACGGATGC
TGCGTACGGCACTTTGGCTGCCACGCAGGTCGCCCGGCTCAAGGATGCCG
GAAAGTGCACACCGGAGATGATTTCGATGGTCAAGAGACAGAACTGTGAC
CGTGCCCTGGCTAACTCGAGAATATGAACCCCTCCAGCTTCCGCACGGCT
TCGCGCCACCTCCACCGCCTGTGTCGAGCGCCCGCAACTTCGCGCAATGC
TTCGGTCCGTGGATATGCGACGACTTTCAACTGGGAGGATCCTTTGGTTG
CATCCGAGCTGTATACAGAGGAGGAATTGGCTATCCAAGACACTGCTCGG
CAATACTGCCAGGAACGACTGCTACCCCGCGTTCTAGCCCTGATCCTTGG
TCGCGCCATCACCGGTGTTCAGGCATTCGTCTAGTCTTCAGGAAGTGTTT
GGTGGAAACGCCACCAGTGACGAGTACCATATTGCCAGGCATGTAGCCAA
CCTGTTCGTGGTGCAGACTTATGAGGGACAGAGTGACATTCATAATGCCT
ACCGGAACGAGAACTATGACCGCCAGATCCTGACCGAGATGGGCGAGCTC
GGCCTCCTCGGCGCGAACATTGAAGGGTATGGTTGCGCCGGCGCAAGCAC
CGTGGCCTCCGGCCTGATCACGAAGGAAGTCGAGCGTGTGGACTCAGGAT
ATCGTTCAGGAATGTCTGTGCAGAGCTCTCTGGCTATGACGGCCATCCAT
GACTTTGGTACACAGGAGCTGAAGGACAGACTCCTCCCGGAGCTGGCGAA
GGGAAAACTGGCTGGATGCTTTGGTCTCACTGAGCCCAATCACGGCTCTG
ACCCTGGCTCCATGGAGACAGTCGCCCGGGAGCACCCTACCAAGAAGGGT
TACTACTTGCTCTCTGGCACCAAGACCTGGATCACCAACTCCCCGATCTC
CGACATCATGATCGTCTGGGCTAAGCTGCAGACCACGGGCAAGATCCGTG
GATTCGTCGTCGAGCGCAGCCAATGCCCACCGGGTACTCTGGAGACGCCC
GCCATCAAGAACAAGACCGCCCTGCGCGCCTCTATTACCGGCATGATCCA
AATGGATGACTGCCCTGTTCCTGCGGAGAACATGTTCCCTGAAGTGCAAG
GGCTCGCTGGTCCCTTCACCTGCCTTAACAGCGCTCGTCTGGGCATTGCC
TTTGGAGCTATGGGTGCGCTTGAAGATTGCCTGAGCCGTGCGCGCACCTA
TGCACTTGAGCGCAAGCAGTTCAAGGGTAACCCGCTGGCGAAGTACCAAC
TCATTCAGAAGAAGCTGGTGGATGCGGCTACGGATGCTGCGTACGGCACT
TTGGCTGCCACGCAGGTCGCCCGGCTCAAGGATGCCGGAAAGTGCACACC
GGAGATGATTTCGATGGTCAAGAGACAGAACTGTGACCGTGCCCTGGCTA
ACTCGAGAATATGAACCCCTCCAGCTTCCGCACGGCTTCGCGCCACCTCC
ACCGCCTGTGTCGAGCGCCCGCAACTTCGCGCAATGCTTCGGTCCGTGGA
TATGCGACGACTTTCAACTGGGAGGATCCTTTGGTTGCATCCGAGCTGTA
TACAGAGGAGGAATTGGCTATCCAAGACACTGCTCGGCAATACTGCCAGG
AACGACTGCTACCCCGCGTTCTAGCCCTGATCCTTGGTCGCGCCATCACC
GGTGTTCAGGCATTCGTCTAGTCTTCAGGAAGTGTTTGGTGGAAACGCCA
CCAGTGACGAGTACCATATTGCCAGGCATGTAGCCAACCTGTTCGTGGTG
CAGACTTATGAGGGACAGAGTGACATTCATAATGCCTACCGGAACGAGAA
CTATGACCGCCAGATCCTGACCGAGATGGGCGAGCTCGGCCTCCTCGGCG
CGAACATTGAAGGGTATGGTTGCGCCGGCGCAAGCACCGTGGCCTCCGGC
CTGATCACGAAGGAAGTCGAGCGTGTGGACTCAGGATATCGTTCAGGAAT
GTCTGTGCAGAGCTCTCTGGCTATGACGGCCATCCATGACTTTGGTACAC
AGGAGCTGAAGGACAGACTCCTCCCGGAGCTGGCGAAGGGAAAACTGGCT
GGATGCTTTGGTCTCACTGAGCCCAATCACGGCTCTGACCCTGGCTCCAT
GGAGACAGTCGCCCGGGAGCACCCTACCAAGAAGGGTTACTACTTGCTCT
CTGGCACCAAGACCTGGATCACCAACTCCCCGATCTCCGACATCATGATC
GTCTGGGCTAAGCTGCAGACCACGGGCAAGATCCGTGGATTCGTCGTCGA
GCGCAGCCAATGCCCACCGGGTACTCTGGAGACGCCCGCCATCAAGAACA
AGACCGCCCTGCGCGCCTCTATTACCGGCATGATCCAAATGGATGACTGC
CCTGTTCCTGCGGAGAACATGTTCCCTGAAGTGCAAGGGCTCGCTGGTCC
CTTCACCTGCCTTAACAGCGCTCGTCTGGGCATTGCCTTTGGAGCTATGG
GTGCGCTTGAAGATTGCCTGAGCCGTGCGCGCACCTATGCACTTGAGCGC
AAGCAGTTCAAGGGTAACCCGCTGGCGAAGTACCAACTCATTCAGAAGAA
GCTGGTGGATGCGGCTACGGATGCTGCGTACGGCACTTTGGCTGCCACGC
AGGTCGCCCGGCTCAAGGATGCCGGAAAGTGCACACCGGAGATGATTTCG
ATGGTCAAGAGACAGAACTGTGACCGTGCCCTGGCTAACTCGAGAATATG
AACCCCTCCAGCTTCCGCACGGCTTCGCGCCACCTCCACCGCCTGTGTCG
AGCGCCCGCAACTTCGCGCAATGCTTCGGTCCGTGGATATGCGACGACTT
TCAACTGGGAGGATCCTTTGGTTGCATCCGAGCTGTATACAGAGGAGGAA
TTGGCTATCCAAGACACTGCTCGGCAATACTGCCAGGAACGACTGCTACC
CCGCGTTCTAGCCCTGATCCTTGGTCGCGCCATCACCGGTGTTCAGGCAT
TCGTCTAGTCTTCAGGAAGTGTTTGGTGGAAACGCCACCAGTGACGAGTA
CCATATTGCCAGGCATGTAGCCAACCTGTTCGTGGTGCAGACTTATGAGG
GACAGAGTGACATTCATAATGCCTACCGGAACGAGAACTATGACCGCCAG
ATCCTGACCGAGATGGGCGAGCTCGGCCTCCTCGGCGCGAACATTGAAGG
GTATGGTTGCGCCGGCGCAAGCACCGTGGCCTCCGGCCTGATCACGAAGG
AAGTCGAGCGTGTGGACTCAGGATATCGTTCAGGAATGTCTGTGCAGAGC
TCTCTGGCTATGACGGCCATCCATGACTTTGGTACACAGGAGCTGAAGGA
CAGACTCCTCCCGGAGCTGGCGAAGGGAAAACTGGCTGGATGCTTTGGTC
TCACTGAGCCCAATCACGGCTCTGACCCTGGCTCCATGGAGACAGTCGCC
CGGGAGCACCCTACCAAGAAGGGTTACTACTTGCTCTCTGGCACCAAGAC
CTGGATCACCAACTCCCCGATCTCCGACATCATGATCGTCTGGGCTAAGC
TGCAGACCACGGGCAAGATCCGTGGATTCGTCGTCGAGCGCAGCCAATGC
CCACCGGGTACTCTGGAGACGCCCGCCATCAAGAACAAGACCGCCCTGCG
CGCCTCTATTACCGGCATGATCCAAATGGATGACTGCCCTGTTCCTGCGG
AGAACATGTTCCCTGAAGTGCAAGGGCTCGCTGGTCCCTTCACCTGCCTT
AACAGCGCTCGTCTGGGCATTGCCTTTGGAGCTATGGGTGCGCTTGAAGA
TTGCCTGAGCCGTGCGCGCACCTATGCACTTGAGCGCAAGCAGTTCAAGG
GTAACCCGCTGGCGAAGTACCAACTCATTCAGAAGAAGCTGGTGGATGCG
GCTACGGATGCTGCGTACGGCACTTTGGCTGCCACGCAGGTCGCCCGGCT
CAAGGATGCCGGAAAGTGCACACCGGAGATGATTTCGATGGTCAAGAGAC
AGAACTGTGACCGTGCCCTGGCTAACTCGAGAATATGAACCCCTCCAGCT
TCCGCACGGCTTCGCGCCACCTCCACCGCCTGTGTCGAGCGCCCGCAACT
TCGCGCAATGCTTCGGTCCGTGGATATGCGACGACTTTCAACTGGGAGGA
TCCTTTGGTTGCATCCGAGCTGTATACAGAGGAGGAATTGGCTATCCAAG
ACACTGCTCGGCAATACTGCCAGGAACGACTGCTACCCCGCGTTCTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002003-T1.utr3p1 | KJC3_002003-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002003-T1.utr5p1 | KJC3_002003-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR009100 |
| DBxref | InterPro:IPR036250 |
| DBxref | InterPro:IPR006091 |
| DBxref | InterPro:IPR037069 |
| DBxref | InterPro:IPR009075 |
| DBxref | InterPro:IPR013786 |
| DBxref | PFAM:PF02771 |
| DBxref | PFAM:PF02770 |
| DBxref | PFAM:PF08028 |
| DBxref | PFAM:PF00441 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:1409535..1411565 - |
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