KJC3_002008-T1, KJC3_002008-T1 (mRNA) Aspergillus niger KJC3

Overview


Name	KJC3_002008-T1
Unique Name	KJC3_002008-T1
Type	mRNA
Organism	Aspergillus niger KJC3

Sequences

The following sequences are available for this feature:

mRNA from alignment at ch2:1428572..1431585-
coding sequence from alignment at ch2:1428572..1431585-

mRNA from alignment at ch2:1428572..1431585-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>KJC3_002008-T1 ID=KJC3_002008-T1|Name=KJC3_002008-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3014bp|location=Sequence derived from alignment at ch2:1428572..1431585- (Aspergillus niger KJC3)
CCGCTCCTCCAATCCTCTCAGACGAGGTATAGCTGCGATCTTTGAAAGCC
TTCTGCTCCTAGGTCTACTCTTATCTAGACTCGTTTCGTTCGGATAAAAG
TTTACCTTCTTTAACGCCTGTCGGGGCGCTCGGGACACGTGCCTGAGAAT
CCCGTTCTCCGCTATCCCAACAGTGTTATCCAACCTCTCCCCCCCATCGC
AGACTTCACTTTCCCCCCACAACGCAGCCCAATCACCATCATCATCGGGA
TGGACAACTCACAGGCACAGCCCCAGGCTGCTCAACCCCAGGCCCCTGCA
GCCCAGCCGATGATGCCGCAGCACTCCAACCTGATCCGAACCGACCAAGT
CCAGAAGCTTCCCCATCTCAACGACCAGCAGAAAGCCCAGCACACCCAGC
TCGTGCGGACCTTATGGGAACATCTCAATAGTCGGGAACCGCAGACTACC
GAGTATCAACAGGCTCATGCGAGACTCACCCAGATTTCCCAAAATCTCAT
GAAAGGCATGCGCGCTTTTCAGCAAAGCCGCCAAATGCAACACCAGCAAT
TGCAAGCGGCAAACGCAGCGCAACCAGGTCAACCAGTCCAGCGATCGCAG
TCGGTTAATCCGCAGAACTTCGCGCAGCTTCTCCCTCAGATTCAGCAGAA
AGTCAACACTCTGCAGTTCTTCCTCCCTCCGAACATCAGCAACGAGCAGG
CCCAGACCTGGCTCCCCGAAGCCAAACTACGATATGGGATCGCGCTTCAG
AAGCAGGAGATCGGACGGGCGCGAATCGCGGATCTCAGACAACAGTTTGC
GACGCGTCAGTCTGCGGGAAATATGACTCAGGAGGAGGTGCAGGAGTTCA
AGAACCGGCAACTTGCGGCGGAGAAGCTTTACCGCGAGGGAAGCGACTTC
CTGAACAAATTCAAGGAACAGCAGGATACCTTCAAGGCCCAGCAACAGCG
AGCTGGTGTGCAACAACATGTTCCTGCTCAAGCGCATCCACAGCAAGCTC
CTAGTCAAGCTGCGCCCGGTACAGCTGCTGGCCCCGCCGACGGCCGTCCA
CCAAGCGTCCCCGGCACCATGCATCCAGGCCAGACCCCTACCCCGGCGCC
TCACACAATCACATCGGCAGTTTCCGCTGCACGCAACCAGGCGGGACAGA
CTGCGATGTCGCCTTCGACTTCTCAGCCCGGTCAAACGCCAACCGCCCAG
GGCGCCACGCCTGCCGTCCCTGCTGTGCCCCAACAGCAACCGCCACAGCA
AGCACCCCAGCAACAGCCACAGGCCCCGGTCCAGGCACAGTCACAGCAGG
GCCCACCAGGCTCACAGGTCACCTTCACTCAAGTCCCCAATGTCGACGGT
TCAACTCCCACTCCTCCTGGGGCTCAGACCATGGTCCAACCTCGTCCTTT
GTCTCAGCAGGCCGCCATGGCTCAAGCTGCGCAGAACTACTCTAACAACA
ACGTTAACAACAATAACATGAATCAGCAGCAGAACGTCACTCAGCCTGGC
GCCAACACCCACGCTCACCCCCAGGGCTACATTCCCAACCGCTCTGCCGA
CACTAACGCGCGTAGCATCAACATGGCCATCCCCAAGAACCTGAATGTGC
CTCCTCCAGAGCCCGTCAACATGGCTCCTGCTCGGCCCACGTTATCTGGC
GGACCCAGTCACGGTGCAGTCGGTGTGATGAATCAGCCTGCAATCCAGAA
ACACCCCGGCTACGTGCTCGAGGGTGAAGGTCAGCGCGTTCTGAGCAAGA
AGATGCTGGATATTCTCGTTCGTCAGGTCACTGGTGGTGGAGAGGGCGAA
GGACTCACCCCCGATGCTGAAGAGGTAAGTCCCGTGATTTCCCAGGATCC
TTCTCAGAATCAATAAAAGTCTAATTCCCCTACGTGCAGTTCATCCTTCA
GATGGCAGATGACTTTGTTGACGATGTGATCACGGATGCCTGCCGTCTCG
CCAAACTCCGCCCGTCCTCGACTCTCGAGATTCGCGATATTCAGCTTGTC
TTGGAGCGCAAGTACAATATGCGCATTTCCGGATTTTCCACTGACGACCT
GCGTACTGTCAAGAAGCCTCAGCCCACTCAAGGCTGGACCCAGAAGATGT
CCGCCATTCAGGCTGCCAAGGTAACCCAAGGCAAGGCCGAATGAATAACG
GCGACTTCTTTATTTTCTCATCCATTACGACTTTCACGCGCGCGCTCTAC
TTTCGGTCTGCAATATGAGCCTCGATTCACCTCTCTTACAGACGAGAAAA
ACACAGAAGATGGGCGTGCACGAATGCACTTGTTCTACCTATCCATTTCC
CTCCACAACTCCAAATTCACAACATCAAAACAAAATAAAACAAAAGTGTC
TCTAACAGCAACTGCAAGATATGATCAAATCACTGGTTCGAGGTGGCGTT
CACGGGAGGCGGCAGGTGGTCTTTTTTGACTCTAGTTTACTCTTGCGATT
TACTTTTTTCCGTTCCTCCAACCACGCTCAGTCACATCCTCAACATGGTA
TTCACAGTGACTCGTTAATGGATCGGAAAGGACCTTTTCAAGCATTTTGC
TATGGCGTCATCTGTGTTTTCATTCACCCTCTGATATCTTCCTTTTGCCC
TTTGCAATTCACGCCGCGCTTTTTGTTGTTCCCTTTTCTTTCGAAGCCAA
GCTATAGTCATTCTTCTATGGCGTAGTGGTTTTTCTCTTTAATGCACCCT
TTTGTCTCTTTTTTCTCTTCTCCCACTTATGATGAACCTTCTTATCTGTT
TCTATCTTTTTTCCCCTTGCCTATTAAGGCTTCTTCCTGCTTACTGCTTA
CACTGGACTACGGTTGTTTTCCTGCTCGGTTACGCTGGTTGTTCAATTTT
TTCATGGAAATACCCACTTAGGCAAAGTAGTGTCGGTGCGAAATGAATTA
TGACTTGGATTTGTGGGCTGAAAATATTCTCTTTCTCTTCCTTGAAGTTA
TGAGTATATTGGTGTGGTAAGTGGATTGGTATACACAGATGGTATATCTA
CGCCTCAATTACAG

Coding sequence (CDS) from alignment at ch2:1428572..1431585-

>KJC3_002008-T1 ID=KJC3_002008-T1|Name=KJC3_002008-T1|organism=Aspergillus niger KJC3|type=CDS|length=3660bp|location=Sequence derived from alignment at ch2:1428572..1431585- (Aspergillus niger KJC3)
TTCATCCTTCAGATGGCAGATGACTTTGTTGACGATGTGATCACGGATGC
CTGCCGTCTCGCCAAACTCCGCCCGTCCTCGACTCTCGAGATTCGCGATA
TTCAGCTTGTCTTGGAGCGCAAGTACAATATGCGCATTTCCGGATTTTCC
ACTGACGACCTGCGTACTGTCAAGAAGCCTCAGCCCACTCAAGGCTGGAC
CCAGAAGATGTCCGCCATTCAGGCTGCCAAGGTAACCCAAGGCAAGGCCG
AATGAATGGACAACTCACAGGCACAGCCCCAGGCTGCTCAACCCCAGGCC
CCTGCAGCCCAGCCGATGATGCCGCAGCACTCCAACCTGATCCGAACCGA
CCAAGTCCAGAAGCTTCCCCATCTCAACGACCAGCAGAAAGCCCAGCACA
CCCAGCTCGTGCGGACCTTATGGGAACATCTCAATAGTCGGGAACCGCAG
ACTACCGAGTATCAACAGGCTCATGCGAGACTCACCCAGATTTCCCAAAA
TCTCATGAAAGGCATGCGCGCTTTTCAGCAAAGCCGCCAAATGCAACACC
AGCAATTGCAAGCGGCAAACGCAGCGCAACCAGGTCAACCAGTCCAGCGA
TCGCAGTCGGTTAATCCGCAGAACTTCGCGCAGCTTCTCCCTCAGATTCA
GCAGAAAGTCAACACTCTGCAGTTCTTCCTCCCTCCGAACATCAGCAACG
AGCAGGCCCAGACCTGGCTCCCCGAAGCCAAACTACGATATGGGATCGCG
CTTCAGAAGCAGGAGATCGGACGGGCGCGAATCGCGGATCTCAGACAACA
GTTTGCGACGCGTCAGTCTGCGGGAAATATGACTCAGGAGGAGGTGCAGG
AGTTCAAGAACCGGCAACTTGCGGCGGAGAAGCTTTACCGCGAGGGAAGC
GACTTCCTGAACAAATTCAAGGAACAGCAGGATACCTTCAAGGCCCAGCA
ACAGCGAGCTGGTGTGCAACAACATGTTCCTGCTCAAGCGCATCCACAGC
AAGCTCCTAGTCAAGCTGCGCCCGGTACAGCTGCTGGCCCCGCCGACGGC
CGTCCACCAAGCGTCCCCGGCACCATGCATCCAGGCCAGACCCCTACCCC
GGCGCCTCACACAATCACATCGGCAGTTTCCGCTGCACGCAACCAGGCGG
GACAGACTGCGATGTCGCCTTCGACTTCTCAGCCCGGTCAAACGCCAACC
GCCCAGGGCGCCACGCCTGCCGTCCCTGCTGTGCCCCAACAGCAACCGCC
ACAGCAAGCACCCCAGCAACAGCCACAGGCCCCGGTCCAGGCACAGTCAC
AGCAGGGCCCACCAGGCTCACAGGTCACCTTCACTCAAGTCCCCAATGTC
GACGGTTCAACTCCCACTCCTCCTGGGGCTCAGACCATGGTCCAACCTCG
TCCTTTGTCTCAGCAGGCCGCCATGGCTCAAGCTGCGCAGAACTACTCTA
ACAACAACGTTAACAACAATAACATGAATCAGCAGCAGAACGTCACTCAG
CCTGGCGCCAACACCCACGCTCACCCCCAGGGCTACATTCCCAACCGCTC
TGCCGACACTAACGCGCGTAGCATCAACATGGCCATCCCCAAGAACCTGA
ATGTGCCTCCTCCAGAGCCCGTCAACATGGCTCCTGCTCGGCCCACGTTA
TCTGGCGGACCCAGTCACGGTGCAGTCGGTGTGATGAATCAGCCTGCAAT
CCAGAAACACCCCGGCTACGTGCTCGAGGGTGAAGGTCAGCGCGTTCTGA
GCAAGAAGATGCTGGATATTCTCGTTCGTCAGGTCACTGGTGGTGGAGAG
GGCGAAGGACTCACCCCCGATGCTGAAGAGTTCATCCTTCAGATGGCAGA
TGACTTTGTTGACGATGTGATCACGGATGCCTGCCGTCTCGCCAAACTCC
GCCCGTCCTCGACTCTCGAGATTCGCGATATTCAGCTTGTCTTGGAGCGC
AAGTACAATATGCGCATTTCCGGATTTTCCACTGACGACCTGCGTACTGT
CAAGAAGCCTCAGCCCACTCAAGGCTGGACCCAGAAGATGTCCGCCATTC
AGGCTGCCAAGGTAACCCAAGGCAAGGCCGAATGAATGGACAACTCACAG
GCACAGCCCCAGGCTGCTCAACCCCAGGCCCCTGCAGCCCAGCCGATGAT
GCCGCAGCACTCCAACCTGATCCGAACCGACCAAGTCCAGAAGCTTCCCC
ATCTCAACGACCAGCAGAAAGCCCAGCACACCCAGCTCGTGCGGACCTTA
TGGGAACATCTCAATAGTCGGGAACCGCAGACTACCGAGTATCAACAGGC
TCATGCGAGACTCACCCAGATTTCCCAAAATCTCATGAAAGGCATGCGCG
CTTTTCAGCAAAGCCGCCAAATGCAACACCAGCAATTGCAAGCGGCAAAC
GCAGCGCAACCAGGTCAACCAGTCCAGCGATCGCAGTCGGTTAATCCGCA
GAACTTCGCGCAGCTTCTCCCTCAGATTCAGCAGAAAGTCAACACTCTGC
AGTTCTTCCTCCCTCCGAACATCAGCAACGAGCAGGCCCAGACCTGGCTC
CCCGAAGCCAAACTACGATATGGGATCGCGCTTCAGAAGCAGGAGATCGG
ACGGGCGCGAATCGCGGATCTCAGACAACAGTTTGCGACGCGTCAGTCTG
CGGGAAATATGACTCAGGAGGAGGTGCAGGAGTTCAAGAACCGGCAACTT
GCGGCGGAGAAGCTTTACCGCGAGGGAAGCGACTTCCTGAACAAATTCAA
GGAACAGCAGGATACCTTCAAGGCCCAGCAACAGCGAGCTGGTGTGCAAC
AACATGTTCCTGCTCAAGCGCATCCACAGCAAGCTCCTAGTCAAGCTGCG
CCCGGTACAGCTGCTGGCCCCGCCGACGGCCGTCCACCAAGCGTCCCCGG
CACCATGCATCCAGGCCAGACCCCTACCCCGGCGCCTCACACAATCACAT
CGGCAGTTTCCGCTGCACGCAACCAGGCGGGACAGACTGCGATGTCGCCT
TCGACTTCTCAGCCCGGTCAAACGCCAACCGCCCAGGGCGCCACGCCTGC
CGTCCCTGCTGTGCCCCAACAGCAACCGCCACAGCAAGCACCCCAGCAAC
AGCCACAGGCCCCGGTCCAGGCACAGTCACAGCAGGGCCCACCAGGCTCA
CAGGTCACCTTCACTCAAGTCCCCAATGTCGACGGTTCAACTCCCACTCC
TCCTGGGGCTCAGACCATGGTCCAACCTCGTCCTTTGTCTCAGCAGGCCG
CCATGGCTCAAGCTGCGCAGAACTACTCTAACAACAACGTTAACAACAAT
AACATGAATCAGCAGCAGAACGTCACTCAGCCTGGCGCCAACACCCACGC
TCACCCCCAGGGCTACATTCCCAACCGCTCTGCCGACACTAACGCGCGTA
GCATCAACATGGCCATCCCCAAGAACCTGAATGTGCCTCCTCCAGAGCCC
GTCAACATGGCTCCTGCTCGGCCCACGTTATCTGGCGGACCCAGTCACGG
TGCAGTCGGTGTGATGAATCAGCCTGCAATCCAGAAACACCCCGGCTACG
TGCTCGAGGGTGAAGGTCAGCGCGTTCTGAGCAAGAAGATGCTGGATATT
CTCGTTCGTCAGGTCACTGGTGGTGGAGAGGGCGAAGGACTCACCCCCGA
TGCTGAAGAG

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005669	transcription factor TFIID complex

Vocabulary: **Molecular Function**
Term	Definition
GO:0046982	protein heterodimerization activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006352	DNA-templated transcription, initiation

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
KJC3_002008	KJC3_002008	Aspergillus niger KJC3	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
KJC3_002008-T1	KJC3_002008-T1-protein	Aspergillus niger KJC3	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
KJC3_002008-T1.cds	KJC3_002008-T1.cds	Aspergillus niger KJC3	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
KJC3_002008-T1.utr3p1	KJC3_002008-T1.utr3p1	Aspergillus niger KJC3	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
KJC3_002008-T1.exon2	KJC3_002008-T1.exon2	Aspergillus niger KJC3	exon
KJC3_002008-T1.exon1	KJC3_002008-T1.exon1	Aspergillus niger KJC3	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
KJC3_002008-T1.utr5p1	KJC3_002008-T1.utr5p1	Aspergillus niger KJC3	five_prime_UTR

Properties


Property Name	Value
DBxref	InterPro:IPR009072
DBxref	InterPro:IPR003228
DBxref	PFAM:PF03847
Product	hypothetical protein

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC3	2021-10-31

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ch2	supercontig	ch2:1428572..1431585 -

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KJC3_002008-T1, KJC3_002008-T1 (mRNA) Aspergillus niger KJC3