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KJC3_002009-T1, KJC3_002009-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002009-T1
Unique NameKJC3_002009-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:1432048..1433617-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002009-T1 ID=KJC3_002009-T1|Name=KJC3_002009-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1570bp|location=Sequence derived from alignment at ch2:1432048..1433617- (Aspergillus niger KJC3)
CCGCAGCGATAACCAAACTAAACTCACTGAAGCACAAGTTCCCTTTTTGC
ACACCCCTCGACACAGAACAGAAAAAATGTCGCTCCTTGAAAGTCATCTA
GAGCAGATCTCACTGTCTTCTAATGCCATTGCGGAGCTACCGTATGCATC
CCCCTCTCACCTTGCTTCGTACCCGGCATTGATTGTTTCTGCCCCAGGTT
TCCCCAACCGCGGATCTTCACCAATGCGCTGCTAGGCCCCCACGATATCA
CCTCCTTGATTCGAGATACGGAGGCTCATGAACGGGCTCTCTTTCAATCC
GATCCCTCCGTCAAATCGGTCGGCTCACAGCGACGTCCCACCCGACGCGG
CACGCAGTTTGCGCAGGATTCGGAAGGCGAGTCCATGGCAAGTCGGATTT
ATTCCGCTAGAGATAACAAGAGTCAATCAGCCGTCGCAAGGGTTCTGGGT
GCTGATATGATGGAGGAGATCAAGCGATCCGCTGGCACGTCGAGTAGGGG
TCGTGGTGAAGTCAACGTCGACGTTCTACTCCAGGGCGCAGAGATTCTCT
GCAATGTCTAGTACGCTCTTCACTCGTCCTCAAGTGCCAAGTCCTGCTTA
TAATTACTGACTACATGCACAGTCCTGTCGCTGGTGCACATGAGAAAATA
GCCAGTCTACGTTATCGTCACGAGTTGATTTCAGGTTCGATTAATGAACT
GGAGGCACGTGTGGCTAGAAACACCGCAGAGTTGGAAAAGATGAGCCACT
CCTACGGAGATGACTTTGATGAATATGATGGCATCGATTCCACACCGCCC
GAGGTGGCTGATGTTACGGATGCAGACCTTGAGCGAGAGATGGCGGAGAT
CCGCGAGCTGGAGAGAAAGAAACGCACATTGGAGGCCCGTGTTCACGGCA
TGGAACGAGACCTGGGTGGGTTGTTGGGTTGAGAGCTCGGGAAGCTCTAT
TCTATTTACCAGTTTAGCGAGACCGTGGTGTCAAGTGCTCACAACGTCGT
CTCAATACTCAGAAGGCAGGCCGTCTCCATACAGATACGGTGGACACCGC
TATTACTATGGCTGATTCAGACGGCCGTCATTGATACGACAGGAAGTCTC
CCTGGAAACAATTTCTAGCCCGACAAAACATCCCAGCTTCGATGGATGCT
GTGCGGCTTCTCCCCGCCTTAGCTTCTTTGCCATTATCGCTAGATATGCT
GCAGCTTCTGACCCGGGCAAGTCCGGCCACGAAGACTCATCACGACTGCA
TGCTTGCGCTTATATCGTCTTTGGCTTTCACCAAGGATGTACCGCGATAT
CGCCTGCGAAAAATCAGCTAATTCTGGCTAGCCTTTGGACGCATCATCTC
ATTGCGACTCATACAGGCATAACGCGGCTACTCTGAGCAATGGATTTGGT
ACGTTCCACATCAAAGGTCTCTATCAGTTTGTGTATAGGCATGGCCAACC
CGCACCAATTGAGTGTCCTGGGTTTTTCCAGGGAAAGACCATATCACACA
AGGATTTCATGATTTGATGAGGTATCGGGTCTTGTGTTACTTTGTTAAAT
CAGAAATTATCCTTATTTGA
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Coding sequence (CDS) from alignment at ch2:1432048..1433617-

>KJC3_002009-T1 ID=KJC3_002009-T1|Name=KJC3_002009-T1|organism=Aspergillus niger KJC3|type=CDS|length=2736bp|location=Sequence derived from alignment at ch2:1432048..1433617- (Aspergillus niger KJC3)
TCCTGTCGCTGGTGCACATGAGAAAATAGCCAGTCTACGTTATCGTCACG
AGTTGATTTCAGGTTCGATTAATGAACTGGAGGCACGTGTGGCTAGAAAC
ACCGCAGAGTTGGAAAAGATGAGCCACTCCTACGGAGATGACTTTGATGA
ATATGATGGCATCGATTCCACACCGCCCGAGGTGGCTGATGTTACGGATG
CAGACCTTGAGCGAGAGATGGCGGAGATCCGCGAGCTGGAGAGAAAGAAA
CGCACATTGGAGGCCCGTGTTCACGGCATGGAACGAGACCTGGGTGGGTT
GTTGGGTTGACCGTCGCAAGGGTTCTGGGTGCTGATATGATGGAGGAGAT
CAAGCGATCCGCTGGCACGTCGAGTAGGGGTCGTGGTGAAGTCAACGTCG
ACGTTCTACTCCAGGGCGCAGAGATTCTCTGCAATGTCTAGTTTCCCCAA
CCGCGGATCTTCACCAATGCGCTGCTAGGCCCCCACGATATCACCTCCTT
GATTCGAGATACGGAGGCTCATGAACGGGCTCTCTTTCAATCCGATCCCT
CCGTCAAATCGGTCGGCTCACAGCGACGTCCCACCCGACGCGGCACGCAG
TTTGCGCAGGATTCGGAAGATGTCGCTCCTTGAAAGTCATCTAGAGCAGA
TCTCACTGTCTTCTAATGCCATTGCGGAGCTACCTCCTGTCGCTGGTGCA
CATGAGAAAATAGCCAGTCTACGTTATCGTCACGAGTTGATTTCAGGTTC
GATTAATGAACTGGAGGCACGTGTGGCTAGAAACACCGCAGAGTTGGAAA
AGATGAGCCACTCCTACGGAGATGACTTTGATGAATATGATGGCATCGAT
TCCACACCGCCCGAGGTGGCTGATGTTACGGATGCAGACCTTGAGCGAGA
GATGGCGGAGATCCGCGAGCTGGAGAGAAAGAAACGCACATTGGAGGCCC
GTGTTCACGGCATGGAACGAGACCTGGGTGGGTTGTTGGGTTGACCGTCG
CAAGGGTTCTGGGTGCTGATATGATGGAGGAGATCAAGCGATCCGCTGGC
ACGTCGAGTAGGGGTCGTGGTGAAGTCAACGTCGACGTTCTACTCCAGGG
CGCAGAGATTCTCTGCAATGTCTAGTTTCCCCAACCGCGGATCTTCACCA
ATGCGCTGCTAGGCCCCCACGATATCACCTCCTTGATTCGAGATACGGAG
GCTCATGAACGGGCTCTCTTTCAATCCGATCCCTCCGTCAAATCGGTCGG
CTCACAGCGACGTCCCACCCGACGCGGCACGCAGTTTGCGCAGGATTCGG
AAGATGTCGCTCCTTGAAAGTCATCTAGAGCAGATCTCACTGTCTTCTAA
TGCCATTGCGGAGCTACCTCCTGTCGCTGGTGCACATGAGAAAATAGCCA
GTCTACGTTATCGTCACGAGTTGATTTCAGGTTCGATTAATGAACTGGAG
GCACGTGTGGCTAGAAACACCGCAGAGTTGGAAAAGATGAGCCACTCCTA
CGGAGATGACTTTGATGAATATGATGGCATCGATTCCACACCGCCCGAGG
TGGCTGATGTTACGGATGCAGACCTTGAGCGAGAGATGGCGGAGATCCGC
GAGCTGGAGAGAAAGAAACGCACATTGGAGGCCCGTGTTCACGGCATGGA
ACGAGACCTGGGTGGGTTGTTGGGTTGACCGTCGCAAGGGTTCTGGGTGC
TGATATGATGGAGGAGATCAAGCGATCCGCTGGCACGTCGAGTAGGGGTC
GTGGTGAAGTCAACGTCGACGTTCTACTCCAGGGCGCAGAGATTCTCTGC
AATGTCTAGTTTCCCCAACCGCGGATCTTCACCAATGCGCTGCTAGGCCC
CCACGATATCACCTCCTTGATTCGAGATACGGAGGCTCATGAACGGGCTC
TCTTTCAATCCGATCCCTCCGTCAAATCGGTCGGCTCACAGCGACGTCCC
ACCCGACGCGGCACGCAGTTTGCGCAGGATTCGGAAGATGTCGCTCCTTG
AAAGTCATCTAGAGCAGATCTCACTGTCTTCTAATGCCATTGCGGAGCTA
CCTCCTGTCGCTGGTGCACATGAGAAAATAGCCAGTCTACGTTATCGTCA
CGAGTTGATTTCAGGTTCGATTAATGAACTGGAGGCACGTGTGGCTAGAA
ACACCGCAGAGTTGGAAAAGATGAGCCACTCCTACGGAGATGACTTTGAT
GAATATGATGGCATCGATTCCACACCGCCCGAGGTGGCTGATGTTACGGA
TGCAGACCTTGAGCGAGAGATGGCGGAGATCCGCGAGCTGGAGAGAAAGA
AACGCACATTGGAGGCCCGTGTTCACGGCATGGAACGAGACCTGGGTGGG
TTGTTGGGTTGACCGTCGCAAGGGTTCTGGGTGCTGATATGATGGAGGAG
ATCAAGCGATCCGCTGGCACGTCGAGTAGGGGTCGTGGTGAAGTCAACGT
CGACGTTCTACTCCAGGGCGCAGAGATTCTCTGCAATGTCTAGTTTCCCC
AACCGCGGATCTTCACCAATGCGCTGCTAGGCCCCCACGATATCACCTCC
TTGATTCGAGATACGGAGGCTCATGAACGGGCTCTCTTTCAATCCGATCC
CTCCGTCAAATCGGTCGGCTCACAGCGACGTCCCACCCGACGCGGCACGC
AGTTTGCGCAGGATTCGGAAGATGTCGCTCCTTGAAAGTCATCTAGAGCA
GATCTCACTGTCTTCTAATGCCATTGCGGAGCTACC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042729DASH complex
GO:0005876spindle microtubule
Vocabulary: Biological Process
TermDefinition
GO:0008608attachment of spindle microtubules to kinetochore
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002009KJC3_002009Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002009-T1KJC3_002009-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002009-T1.cdsKJC3_002009-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002009-T1.utr3p1KJC3_002009-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002009-T1.exon4KJC3_002009-T1.exon4Aspergillus niger KJC3exon
KJC3_002009-T1.exon3KJC3_002009-T1.exon3Aspergillus niger KJC3exon
KJC3_002009-T1.exon2KJC3_002009-T1.exon2Aspergillus niger KJC3exon
KJC3_002009-T1.exon1KJC3_002009-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002009-T1.utr5p1KJC3_002009-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR013966
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:1432048..1433617 -
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