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KJC3_002033-T1, KJC3_002033-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002033-T1
Unique NameKJC3_002033-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:1491103..1492383+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002033-T1 ID=KJC3_002033-T1|Name=KJC3_002033-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1281bp|location=Sequence derived from alignment at ch2:1491103..1492383+ (Aspergillus niger KJC3)
CCCGATATACTCGCCTCTTTATTAATCCTTAACCCATATACTACCTTAAT
TATTGTAAAAAGGTGTAGCACAACAGTCGTCATGGCTGCCTTGTTCTTCG
CCACTCACCTGTCGACTCCCCAGTCTCAGCTGTGGAGTCCATCCTTCTCT
TCTCCTGGGCATCAGCCACAATCACTTCAAATTACCAGGAAAAACGCCCA
GTTCATCCTCCCCACGGATGCCTGCGTACATGTGGGAAAGTAAGAACAGC
TCTTCATGAGGCATATCTCCCACCACTCCTAGAATCCTAACTCTGTCTAG
TCTCTCCAGCGGTGTCTGTCCGGAAATCCTCCGGCACGAACTGGAGCAGC
TCTTCTTCCAGTTCGGTACGTGCTGGGCGCAGGTTCGCGAAGGAAAGACT
GGCCTTTTTAGCGGTTGGGTGCAGTTCACAGTAATCTACCCTTTGCGCTA
GCGACCGTCTTGTACACTCTATAGTATGAGCAGAGTTAACCCACTTCGCT
TACAGGAAAGGTCCCACGCTCAAGCAGCTATCAGACAGCACCAGAATATC
TTCCTCAGAGGTCGTGCTCTGAGAGTACAGGCCGCAAATGGCCTCAGTAT
GGCTTCCTTGTTGACTCTACAAGTGTTCACTGTCTGACAGTATCACAGGA
AACCGTGTAGAGACGATGGTGCATCGCGAAGAAAGGGCGGAGCTAACCAC
CTCGCCACTATATATGCCCTCTATGGCTATACCGTCCTGCCAGCCCATCG
CGTATGAGCCTGCTATGATGTATAACTTGTCACCGGCTCTTCCAGGATAT
GGTAGCCTTTACATACCCCCTCCTCGCCCTCCCCCTCCTGCCTCTGGTAC
TTTACCTCCCCTATCCTCATGCCCTACTCACCACACATTATCATCACAAG
CCCCCAACGCATATACACCACAATCCTCTTCCTACACTTCTTCCCCATCG
AGCAACACCCTTGACACACAGCCTACGACACCCGGCTGCGATGGAGTAGT
AGCATGCGAGGCCGATCAAGTGAGGGAGGAGGAGTATATCAAGGACAACC
GGTCCAACCTTCCCTGCGACATGCTACTATCTACCGGCCGCACAGTCAGG
GACTACGTTGACGAAATGAAGAGGTTGCGGGGGATTGACCTCAGCGATGA
TGCCACCCGTGAACTCATCTTGGAGTTGGAGGAAGAGGCCCGGGATCAAG
GCTTGTTGCCTGCGCTGACGTCCAAGCCAGACTGAGTGCTAATGGTTGGA
ATAAGAACACGAGATATTGTGTATATAATGA
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Coding sequence (CDS) from alignment at ch2:1491103..1492383+

>KJC3_002033-T1 ID=KJC3_002033-T1|Name=KJC3_002033-T1|organism=Aspergillus niger KJC3|type=CDS|length=3864bp|location=Sequence derived from alignment at ch2:1491103..1492383+ (Aspergillus niger KJC3)
ATGGCTGCCTTGTTCTTCGCCACTCACCTGTCGACTCCCCAGTCTCAGCT
GTGGAGTCCATCCTTCTCTTCTCCTGGGCATCAGCCACAATCACTTCAAA
TTACCAGGAAAAACGCCCAGTTCATCCTCCCCACGGATGCCTGCGTACAT
GTGGGAAATCTCTCCAGCGGTGTCTGTCCGGAAATCCTCCGGCACGAACT
GGAGCAGCTCTTCTTCCAGTTCGGTACGTGCTGGGCGCAGGTTCGCGAAG
GAAAGACTGGCCTTTTTAGCGGTTGGGTGCAGTTCACAGAAAGGTCCCAC
GCTCAAGCAGCTATCAGACAGCACCAGAATATCTTCCTCAGAGGTCGTGC
TCTGAGAGTACAGGCCGCAAATGGCCTCAGAAACCGTGTAGAGACGATGG
TGCATCGCGAAGAAAGGGCGGAGCTAACCACCTCGCCACTATATATGCCC
TCTATGGCTATACCGTCCTGCCAGCCCATCGCGTATGAGCCTGCTATGAT
GTATAACTTGTCACCGGCTCTTCCAGGATATGGTAGCCTTTACATACCCC
CTCCTCGCCCTCCCCCTCCTGCCTCTGGTACTTTACCTCCCCTATCCTCA
TGCCCTACTCACCACACATTATCATCACAAGCCCCCAACGCATATACACC
ACAATCCTCTTCCTACACTTCTTCCCCATCGAGCAACACCCTTGACACAC
AGCCTACGACACCCGGCTGCGATGGAGTAGTAGCATGCGAGGCCGATCAA
GTGAGGGAGGAGGAGTATATCAAGGACAACCGGTCCAACCTTCCCTGCGA
CATGCTACTATCTACCGGCCGCACAGTCAGGGACTACGTTGACGAAATGA
AGAGGTTGCGGGGGATTGACCTCAGCGATGATGCCACCCGTGAACTCATC
TTGGAGTTGGAGGAAGAGGCCCGGGATCAAGGCTTGTTGCCTGCGCTGAC
GTCCAAGCCAGACTGAATGGCTGCCTTGTTCTTCGCCACTCACCTGTCGA
CTCCCCAGTCTCAGCTGTGGAGTCCATCCTTCTCTTCTCCTGGGCATCAG
CCACAATCACTTCAAATTACCAGGAAAAACGCCCAGTTCATCCTCCCCAC
GGATGCCTGCGTACATGTGGGAAATCTCTCCAGCGGTGTCTGTCCGGAAA
TCCTCCGGCACGAACTGGAGCAGCTCTTCTTCCAGTTCGGTACGTGCTGG
GCGCAGGTTCGCGAAGGAAAGACTGGCCTTTTTAGCGGTTGGGTGCAGTT
CACAGAAAGGTCCCACGCTCAAGCAGCTATCAGACAGCACCAGAATATCT
TCCTCAGAGGTCGTGCTCTGAGAGTACAGGCCGCAAATGGCCTCAGAAAC
CGTGTAGAGACGATGGTGCATCGCGAAGAAAGGGCGGAGCTAACCACCTC
GCCACTATATATGCCCTCTATGGCTATACCGTCCTGCCAGCCCATCGCGT
ATGAGCCTGCTATGATGTATAACTTGTCACCGGCTCTTCCAGGATATGGT
AGCCTTTACATACCCCCTCCTCGCCCTCCCCCTCCTGCCTCTGGTACTTT
ACCTCCCCTATCCTCATGCCCTACTCACCACACATTATCATCACAAGCCC
CCAACGCATATACACCACAATCCTCTTCCTACACTTCTTCCCCATCGAGC
AACACCCTTGACACACAGCCTACGACACCCGGCTGCGATGGAGTAGTAGC
ATGCGAGGCCGATCAAGTGAGGGAGGAGGAGTATATCAAGGACAACCGGT
CCAACCTTCCCTGCGACATGCTACTATCTACCGGCCGCACAGTCAGGGAC
TACGTTGACGAAATGAAGAGGTTGCGGGGGATTGACCTCAGCGATGATGC
CACCCGTGAACTCATCTTGGAGTTGGAGGAAGAGGCCCGGGATCAAGGCT
TGTTGCCTGCGCTGACGTCCAAGCCAGACTGAATGGCTGCCTTGTTCTTC
GCCACTCACCTGTCGACTCCCCAGTCTCAGCTGTGGAGTCCATCCTTCTC
TTCTCCTGGGCATCAGCCACAATCACTTCAAATTACCAGGAAAAACGCCC
AGTTCATCCTCCCCACGGATGCCTGCGTACATGTGGGAAATCTCTCCAGC
GGTGTCTGTCCGGAAATCCTCCGGCACGAACTGGAGCAGCTCTTCTTCCA
GTTCGGTACGTGCTGGGCGCAGGTTCGCGAAGGAAAGACTGGCCTTTTTA
GCGGTTGGGTGCAGTTCACAGAAAGGTCCCACGCTCAAGCAGCTATCAGA
CAGCACCAGAATATCTTCCTCAGAGGTCGTGCTCTGAGAGTACAGGCCGC
AAATGGCCTCAGAAACCGTGTAGAGACGATGGTGCATCGCGAAGAAAGGG
CGGAGCTAACCACCTCGCCACTATATATGCCCTCTATGGCTATACCGTCC
TGCCAGCCCATCGCGTATGAGCCTGCTATGATGTATAACTTGTCACCGGC
TCTTCCAGGATATGGTAGCCTTTACATACCCCCTCCTCGCCCTCCCCCTC
CTGCCTCTGGTACTTTACCTCCCCTATCCTCATGCCCTACTCACCACACA
TTATCATCACAAGCCCCCAACGCATATACACCACAATCCTCTTCCTACAC
TTCTTCCCCATCGAGCAACACCCTTGACACACAGCCTACGACACCCGGCT
GCGATGGAGTAGTAGCATGCGAGGCCGATCAAGTGAGGGAGGAGGAGTAT
ATCAAGGACAACCGGTCCAACCTTCCCTGCGACATGCTACTATCTACCGG
CCGCACAGTCAGGGACTACGTTGACGAAATGAAGAGGTTGCGGGGGATTG
ACCTCAGCGATGATGCCACCCGTGAACTCATCTTGGAGTTGGAGGAAGAG
GCCCGGGATCAAGGCTTGTTGCCTGCGCTGACGTCCAAGCCAGACTGAAT
GGCTGCCTTGTTCTTCGCCACTCACCTGTCGACTCCCCAGTCTCAGCTGT
GGAGTCCATCCTTCTCTTCTCCTGGGCATCAGCCACAATCACTTCAAATT
ACCAGGAAAAACGCCCAGTTCATCCTCCCCACGGATGCCTGCGTACATGT
GGGAAATCTCTCCAGCGGTGTCTGTCCGGAAATCCTCCGGCACGAACTGG
AGCAGCTCTTCTTCCAGTTCGGTACGTGCTGGGCGCAGGTTCGCGAAGGA
AAGACTGGCCTTTTTAGCGGTTGGGTGCAGTTCACAGAAAGGTCCCACGC
TCAAGCAGCTATCAGACAGCACCAGAATATCTTCCTCAGAGGTCGTGCTC
TGAGAGTACAGGCCGCAAATGGCCTCAGAAACCGTGTAGAGACGATGGTG
CATCGCGAAGAAAGGGCGGAGCTAACCACCTCGCCACTATATATGCCCTC
TATGGCTATACCGTCCTGCCAGCCCATCGCGTATGAGCCTGCTATGATGT
ATAACTTGTCACCGGCTCTTCCAGGATATGGTAGCCTTTACATACCCCCT
CCTCGCCCTCCCCCTCCTGCCTCTGGTACTTTACCTCCCCTATCCTCATG
CCCTACTCACCACACATTATCATCACAAGCCCCCAACGCATATACACCAC
AATCCTCTTCCTACACTTCTTCCCCATCGAGCAACACCCTTGACACACAG
CCTACGACACCCGGCTGCGATGGAGTAGTAGCATGCGAGGCCGATCAAGT
GAGGGAGGAGGAGTATATCAAGGACAACCGGTCCAACCTTCCCTGCGACA
TGCTACTATCTACCGGCCGCACAGTCAGGGACTACGTTGACGAAATGAAG
AGGTTGCGGGGGATTGACCTCAGCGATGATGCCACCCGTGAACTCATCTT
GGAGTTGGAGGAAGAGGCCCGGGATCAAGGCTTGTTGCCTGCGCTGACGT
CCAAGCCAGACTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002033KJC3_002033Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002033-T1KJC3_002033-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002033-T1.utr5p1KJC3_002033-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002033-T1.exon1KJC3_002033-T1.exon1Aspergillus niger KJC3exon
KJC3_002033-T1.exon2KJC3_002033-T1.exon2Aspergillus niger KJC3exon
KJC3_002033-T1.exon3KJC3_002033-T1.exon3Aspergillus niger KJC3exon
KJC3_002033-T1.exon4KJC3_002033-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002033-T1.cdsKJC3_002033-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002033-T1.utr3p1KJC3_002033-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR000504
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:1491103..1492383 +
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